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Volumn 119, Issue 1, 1996, Pages 49-57

Crystal structure of H2-proteinase from the venom of Trimeresurus flavoviridis

Author keywords

Crystal structure; Snake venom; Zinc protease

Indexed keywords

DISULFIDE; HISTIDINE; METHIONINE; PROTEINASE; SNAKE VENOM; ZINC; CROTALUS ADAMANTEUS PROTEINASE II; H(2) PROTEINASE; H(2)-PROTEINASE; METALLOPROTEINASE;

EID: 0029671268     PISSN: 0021924X     EISSN: None     Source Type: Journal    
DOI: 10.1093/oxfordjournals.jbchem.a021215     Document Type: Article
Times cited : (66)

References (41)
  • 1
    • 0027941838 scopus 로고
    • Families of zinc metalloproteases
    • Hooper, N.M. (1994) Families of zinc metalloproteases. FEBS Lett. 354, 1-6
    • (1994) FEBS Lett. , vol.354 , pp. 1-6
    • Hooper, N.M.1
  • 2
    • 0027515396 scopus 로고
    • Astacins, serralysins, snake venom and matrix metalloproteinases exhibit identical zinc-binding environments (HEXXHXXGXXH and Met-turn) and topologies and should be grouped into a common family, the 'metzincins'
    • Bode, W., Gomis-Rüth, F.X., and Stöcker, W. (1993) Astacins, serralysins, snake venom and matrix metalloproteinases exhibit identical zinc-binding environments (HEXXHXXGXXH and Met-turn) and topologies and should be grouped into a common family, the 'metzincins.' FEBS Lett. 331, 134 140
    • (1993) FEBS Lett. , vol.331 , pp. 134-140
    • Bode, W.1    Gomis-Rüth, F.X.2    Stöcker, W.3
  • 3
    • 0028969678 scopus 로고
    • The metzincins Topological and sequential relations between the astacins, adamalysins, serralysins, and matrixins (collagenases) define a superfamily of zinc-peptidases
    • Stöcker, W., Grams, F., Baumann, U., Reinemer, P., Gomis-Rüth, F.-X., McKay, D.B., and Bode, W. (1995) The metzincins Topological and sequential relations between the astacins, adamalysins, serralysins, and matrixins (collagenases) define a superfamily of zinc-peptidases. Prot. Sci. 4, 823-840
    • (1995) Prot. Sci. , vol.4 , pp. 823-840
    • Stöcker, W.1    Grams, F.2    Baumann, U.3    Reinemer, P.4    Gomis-Rüth, F.-X.5    McKay, D.B.6    Bode, W.7
  • 4
    • 0027418428 scopus 로고
    • Refined 1.8 A X-ray crystal structure of astacin, a zinc-endopeptidase from the crayfish Astacus astacus L
    • Gomis-Rüth, F.X., Stöcker, W., Huber, R., Zwilling, R., and Bode, W. (1994) Refined 1.8 A X-ray crystal structure of astacin, a zinc-endopeptidase from the crayfish Astacus astacus L. J. Mol. Biol. 229, 945-968
    • (1994) J. Mol. Biol. , vol.229 , pp. 945-968
    • Gomis-Rüth, F.X.1    Stöcker, W.2    Huber, R.3    Zwilling, R.4    Bode, W.5
  • 5
    • 0027386056 scopus 로고
    • First structure of a snake venom metalloproteinase: A prototype for matrix metalloproteinases/collagenases
    • Gomis-Rüth, F.X., Kress, L.F., and Bode, W. (1993) First structure of a snake venom metalloproteinase: A prototype for matrix metalloproteinases/collagenases. EMBO J. 12, 4151-4157
    • (1993) EMBO J. , vol.12 , pp. 4151-4157
    • Gomis-Rüth, F.X.1    Kress, L.F.2    Bode, W.3
  • 6
    • 0028176523 scopus 로고
    • Refined 2.0 A X-ray crystal structure of the snake venom zinc-endopeptidase adamalysin II
    • Gomis-Rüth, F.X., Kress, L.F., Kellermann, J., Mayr, I., Lee, X., Huber, R., and Bode, W. (1994) Refined 2.0 A X-ray crystal structure of the snake venom zinc-endopeptidase adamalysin II. J. Mol. Biol. 239, 513-544
    • (1994) J. Mol. Biol. , vol.239 , pp. 513-544
    • Gomis-Rüth, F.X.1    Kress, L.F.2    Kellermann, J.3    Mayr, I.4    Lee, X.5    Huber, R.6    Bode, W.7
  • 9
    • 0028128235 scopus 로고
    • Crystal structures of recombinant 19-kDa human fibroblast collaganase complexed to itself
    • Lovejoy, B., Hassell, A.M., Luther, M.A., Weigl, D., and Jordan, S.R. (1994) Crystal structures of recombinant 19-kDa human fibroblast collaganase complexed to itself. Biochemistry 33, 8207-8217
    • (1994) Biochemistry , vol.33 , pp. 8207-8217
    • Lovejoy, B.1    Hassell, A.M.2    Luther, M.A.3    Weigl, D.4    Jordan, S.R.5
  • 13
    • 0027292152 scopus 로고
    • Three-dimensional structure of the alkaline protease of Pseudomonas aeruginosa: A two-domain protein with a calcium binding parallel beta roll motif
    • Baumann, U., Wu, S., Flaherty, K.M., and McKay, D.B. (1993) Three-dimensional structure of the alkaline protease of Pseudomonas aeruginosa: A two-domain protein with a calcium binding parallel beta roll motif. EMBO J. 12, 3357-3364
    • (1993) EMBO J. , vol.12 , pp. 3357-3364
    • Baumann, U.1    Wu, S.2    Flaherty, K.M.3    McKay, D.B.4
  • 14
    • 0028027226 scopus 로고
    • Crystal structure of the 50 kDa metallo protease from Serratia marcescens
    • Baumann, U. (1994) Crystal structure of the 50 kDa metallo protease from Serratia marcescens. J. Mol. Biol. 242, 244-251
    • (1994) J. Mol. Biol. , vol.242 , pp. 244-251
    • Baumann, U.1
  • 15
    • 0015834958 scopus 로고
    • Action of snake venom hemorrhagic principles on isolated glomerular basement membrane
    • Ohsaka, A., Just, M., and Habermann, E. (1973) Action of snake venom hemorrhagic principles on isolated glomerular basement membrane. Biochim. Biophys. Acta 323, 415-428
    • (1973) Biochim. Biophys. Acta , vol.323 , pp. 415-428
    • Ohsaka, A.1    Just, M.2    Habermann, E.3
  • 16
    • 0003131198 scopus 로고
    • Structure and function of snake venom metalloproteinase family
    • Imahori, K. and Sakiyama, F., eds. Plenum Press, New York
    • Iwanaga, S. and Takeya, H. (1993) Structure and function of snake venom metalloproteinase family in Methods in Protein Sequence Analysis (Imahori, K. and Sakiyama, F., eds.) pp. 107 115, Plenum Press, New York
    • (1993) Methods in Protein Sequence Analysis , pp. 107-115
    • Iwanaga, S.1    Takeya, H.2
  • 17
    • 0014940932 scopus 로고
    • Purification and characterization of a proteinase in the venom of Trimeresurus flavoviridis
    • Takahashi, T. and Ohsaka, A. (1970) Purification and characterization of a proteinase in the venom of Trimeresurus flavoviridis. Biochim. Biophys. Acta 198, 293-307
    • (1970) Biochim. Biophys. Acta , vol.198 , pp. 293-307
    • Takahashi, T.1    Ohsaka, A.2
  • 18
    • 0024690967 scopus 로고
    • 2-proteinase, a nonhemorrhagic metalloproteinase, isolated from the habu snake, Trimeresurus flavoviridis
    • 2-proteinase, a nonhemorrhagic metalloproteinase, isolated from the habu snake, Trimeresurus flavoviridis. J. Biochem. 106, 151-157
    • (1989) J. Biochem. , vol.106 , pp. 151-157
    • Takeya, H.1    Arakawa, M.2    Miyata, T.3    Iwanaga, S.4    Omori-Satoh, T.5
  • 19
    • 0027193420 scopus 로고
    • Primary structures of platelet aggregation inhibitors (disintegrins) autoproteolytically released from snake venom hemorrhagic metalloproteinases and new fluorogenic peptide substrates for these enzymes
    • Takeya, H., Nishida, S., Nishino, N., Makinose, Y., Omori-Satoh, T., Nikai, T., Sugihara, H., and Iwanaga, S. (1993) Primary structures of platelet aggregation inhibitors (disintegrins) autoproteolytically released from snake venom hemorrhagic metalloproteinases and new fluorogenic peptide substrates for these enzymes. J. Biochem. 113, 473-483
    • (1993) J. Biochem. , vol.113 , pp. 473-483
    • Takeya, H.1    Nishida, S.2    Nishino, N.3    Makinose, Y.4    Omori-Satoh, T.5    Nikai, T.6    Sugihara, H.7    Iwanaga, S.8
  • 20
    • 0017661038 scopus 로고
    • Antihemorrhagic factor as a proteinase inhibitor isolated from the serum of Trimeresurus flavoviridis
    • Omori-Satoh, T. (1977) Antihemorrhagic factor as a proteinase inhibitor isolated from the serum of Trimeresurus flavoviridis. Biochim. Biophys. Acta 495, 93-98
    • (1977) Biochim. Biophys. Acta , vol.495 , pp. 93-98
    • Omori-Satoh, T.1
  • 21
    • 0024997837 scopus 로고
    • The complete amino acid sequence of the high molecular mass hemorrhagic protein HR1B isolated from the venom of Trimeresurus flavoviridis
    • Takeya, H., Oda, K., Miyata, T., Omori-Satoh, T., and Iwanaga, S. (1990) The complete amino acid sequence of the high molecular mass hemorrhagic protein HR1B isolated from the venom of Trimeresurus flavoviridis. J. Biol. Chem. 265, 16068-16073
    • (1990) J. Biol. Chem. , vol.265 , pp. 16068-16073
    • Takeya, H.1    Oda, K.2    Miyata, T.3    Omori-Satoh, T.4    Iwanaga, S.5
  • 22
    • 0014965886 scopus 로고
    • Purification and some properties of two hemorrhagic principles (HR2a and HR2b) in the venom of Trimeresurus flavoviridis; complete separation of the principles from proteolytic activity
    • Takahashi, T. and Ohsaka, A. (1969) Purification and some properties of two hemorrhagic principles (HR2a and HR2b) in the venom of Trimeresurus flavoviridis; complete separation of the principles from proteolytic activity. Biochim. Biophys. Acta 207, 65-75
    • (1969) Biochim. Biophys. Acta , vol.207 , pp. 65-75
    • Takahashi, T.1    Ohsaka, A.2
  • 23
    • 0024344059 scopus 로고
    • Primary structures of hemorrhagic protein, HR2a, isolated from the venom of Trimeresurus flavoviridis
    • Miyata, T., Takeya, H., Ozeki, Y., Arakawa, M., Tokunaga, F., Iwanaga, S., and Omori-Satoh, T. (1989) Primary structures of hemorrhagic protein, HR2a, isolated from the venom of Trimeresurus flavoviridis. J. Biochem. 105, 847-853
    • (1989) J. Biochem. , vol.105 , pp. 847-853
    • Miyata, T.1    Takeya, H.2    Ozeki, Y.3    Arakawa, M.4    Tokunaga, F.5    Iwanaga, S.6    Omori-Satoh, T.7
  • 25
    • 0026874436 scopus 로고
    • Development of a high-speed data-collection system with an imaging plate in consideration of large-unit-cell crystals
    • Sato, M., Yamamoto, M., Imada, K., Katsube, Y., Tanaka, N., and Higashi, T. (1991) Development of a high-speed data-collection system with an imaging plate in consideration of large-unit-cell crystals. J. Appl. Cryst. 23, 348-357
    • (1991) J. Appl. Cryst. , vol.23 , pp. 348-357
    • Sato, M.1    Yamamoto, M.2    Imada, K.3    Katsube, Y.4    Tanaka, N.5    Higashi, T.6
  • 26
    • 0001008852 scopus 로고
    • Auto-indexing of oscillation images
    • Higashi, T. (1990) Auto-indexing of oscillation images. J. Appl. Cryst. 23, 253-257
    • (1990) J. Appl. Cryst. , vol.23 , pp. 253-257
    • Higashi, T.1
  • 27
    • 0000293676 scopus 로고
    • X-ray diffraction collection system for modern protein crystallography with a Weissenberg camera and an imaging plate using synchrotron radiation
    • Sakabe, N. (1991) X-ray diffraction collection system for modern protein crystallography with a Weissenberg camera and an imaging plate using synchrotron radiation. Nucl. Instrum. Methods. Phys. Res. A303, 448-463
    • (1991) Nucl. Instrum. Methods. Phys. Res. , vol.A303 , pp. 448-463
    • Sakabe, N.1
  • 28
    • 0002193613 scopus 로고
    • The processing of diffraction data taken on a screenless Weissenberg camera for macromolecular crystallography
    • Higashi, T. (1989) The processing of diffraction data taken on a screenless Weissenberg camera for macromolecular crystallography. J. Appl. Cryst. 22, 9-18
    • (1989) J. Appl. Cryst. , vol.22 , pp. 9-18
    • Higashi, T.1
  • 29
    • 0028103275 scopus 로고
    • The CCP4 Suite: Programs for Protein Crystallography
    • Collaborative Computational Project, Number 4 (1994) The CCP4 Suite: Programs for Protein Crystallography. Acta Cryst. D50, 760-763
    • (1994) Acta Cryst. , vol.D50 , pp. 760-763
  • 30
    • 0002701928 scopus 로고
    • PHASES-A program package for the processing and analysis of diffraction data from macromolecules
    • Furey, W. and Swaminathan, S. (1990) PHASES-A program package for the processing and analysis of diffraction data from macromolecules. Am. Crystallogr. Assoc. Annu. Mtg. Program Abst. 18, 73
    • (1990) Am. Crystallogr. Assoc. Annu. Mtg. Program Abst. , vol.18 , pp. 73
    • Furey, W.1    Swaminathan, S.2
  • 33
    • 79952608525 scopus 로고
    • Accurate bond and angle parameters for X-ray protein structure refinement
    • Engh, R.A. and Huber, R. (1991) Accurate bond and angle parameters for X-ray protein structure refinement. Acta Cryst. A47, 392-400
    • (1991) Acta Cryst. , vol.A47 , pp. 392-400
    • Engh, R.A.1    Huber, R.2
  • 34
    • 0013815214 scopus 로고
    • Stereochemical criteria for polypeptide and protein chain conformations. II. Allowed conformations for a pair of peptide units
    • Ramakrishnan, C. and Ramachandran, G.N. (1965) Stereochemical criteria for polypeptide and protein chain conformations. II. Allowed conformations for a pair of peptide units. Biophys. J. 5, 909-933
    • (1965) Biophys. J. , vol.5 , pp. 909-933
    • Ramakrishnan, C.1    Ramachandran, G.N.2
  • 35
    • 0001099937 scopus 로고
    • Traitement statistique des erreurs dans la determination des structures cristallines
    • Luzzati, P.V. (1952) Traitement statistique des erreurs dans la determination des structures cristallines. Acta. Cryst. 5, 802
    • (1952) Acta. Cryst. , vol.5 , pp. 802
    • Luzzati, P.V.1
  • 36
    • 0014211618 scopus 로고
    • On the size of the active site in proteases. I. Papain
    • Schechter, I. and Berger, A. (1967) On the size of the active site in proteases. I. Papain. Biochem. Biophys. Res. Commun. 27, 157-162
    • (1967) Biochem. Biophys. Res. Commun. , vol.27 , pp. 157-162
    • Schechter, I.1    Berger, A.2
  • 37
    • 0028026095 scopus 로고
    • X-ray analysis of metal-substituted human carbonic anhydrase II derivatives
    • Hakånsson, K., Wehnert, A., and Liljas, A. (1994) X-ray analysis of metal-substituted human carbonic anhydrase II derivatives. Acta Cryst. D50, 93-100
    • (1994) Acta Cryst. , vol.D50 , pp. 93-100
    • Hakånsson, K.1    Wehnert, A.2    Liljas, A.3
  • 38
    • 0028302761 scopus 로고
    • Crystal structures, spectroscopic features, and catalytic properties of cobalt(II), copper(II), nickel(II), and mercury(II) derivatives of the zinc endopeptidase astacin
    • Gomis-Rüth, F.-X., Grams, F., Yiallouros, I., Nar, H., Küsthardt, U., Zwilling, R., Bode, W., and Stöcker, W. (1994) Crystal structures, spectroscopic features, and catalytic properties of cobalt(II), copper(II), nickel(II), and mercury(II) derivatives of the zinc endopeptidase astacin. J. Biol. Chem. 269, 17111-17117
    • (1994) J. Biol. Chem. , vol.269 , pp. 17111-17117
    • Gomis-Rüth, F.-X.1    Grams, F.2    Yiallouros, I.3    Nar, H.4    Küsthardt, U.5    Zwilling, R.6    Bode, W.7    Stöcker, W.8
  • 39
    • 0028337108 scopus 로고
    • cDNA sequences for four snake venom metalloproteinases: Structure, classification, and their relationship to mammalian reproductive proteins
    • Hite, L., Jia, L.-G., Bjanason, J.B., and Fox, J.W. (1994) cDNA sequences for four snake venom metalloproteinases: Structure, classification, and their relationship to mammalian reproductive proteins. Arch. Biochim. Biophys. 308, 182-191
    • (1994) Arch. Biochim. Biophys. , vol.308 , pp. 182-191
    • Hite, L.1    Jia, L.-G.2    Bjanason, J.B.3    Fox, J.W.4
  • 40
    • 0026244229 scopus 로고
    • MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
    • Kraulis, P.J. (1991) MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J. Appl. Cryst. 24, 946-950
    • (1991) J. Appl. Cryst. , vol.24 , pp. 946-950
    • Kraulis, P.J.1
  • 41
    • 0026348765 scopus 로고
    • A common precursor for a putative hemorrhagic protein and rhodostomin, a platelet aggregation inhibitor of the venom of Calloselasma rhodostoma: Molecular cloning and sequence analysis
    • Au, L.C., Huang, Y.B., Huang, T.F., Teh, G.W., Lin, H.H., and Choo, K.B. (1991) A common precursor for a putative hemorrhagic protein and rhodostomin, a platelet aggregation inhibitor of the venom of Calloselasma rhodostoma: Molecular cloning and sequence analysis. Biochem. Biophys. Res. Commun. 181, 585-593
    • (1991) Biochem. Biophys. Res. Commun. , vol.181 , pp. 585-593
    • Au, L.C.1    Huang, Y.B.2    Huang, T.F.3    Teh, G.W.4    Lin, H.H.5    Choo, K.B.6


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