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Volumn 62, Issue 1, 1996, Pages 262-265

Genetic structures of the genes encoding 2,3-dihydroxybiphenyl 1,2-dioxygenase and 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid hydrolase from biphenyl- and 4-chlorobiphenyl-degrading Pseudomonas sp. strain DJ-12

Author keywords

[No Author keywords available]

Indexed keywords

PSEUDOMONAS; PSEUDOMONAS SP.; BACTERIA (MICROORGANISMS);

EID: 0029671091     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.62.1.262-265.1996     Document Type: Article
Times cited : (28)

References (29)
  • 1
    • 0027250341 scopus 로고
    • Three different 2,3-dihydroxybiphenyl-1,2-dioxygenase genes in the gram-positive polychlorobiphenyl-degrading bacterium Rhodococcus globerulus P6
    • Asturias, J. A., and K. N. Timmis. 1993. Three different 2,3-dihydroxybiphenyl-1,2-dioxygenase genes in the gram-positive polychlorobiphenyl-degrading bacterium Rhodococcus globerulus P6. J. Bacteriol. 175:4631-4640.
    • (1993) J. Bacteriol. , vol.175 , pp. 4631-4640
    • Asturias, J.A.1    Timmis, K.N.2
  • 2
    • 0017276771 scopus 로고
    • Microbial metabolism of polychlorinated biphenyls. Studies on the relative degradability of polychlorinated biphenyl components by Alcaligenes sp
    • Furukawa, K., and F. Matsumura. 1976. Microbial metabolism of polychlorinated biphenyls. Studies on the relative degradability of polychlorinated biphenyl components by Alcaligenes sp. J. Agric. Food Chem. 24:251-256.
    • (1976) J. Agric. Food Chem. , vol.24 , pp. 251-256
    • Furukawa, K.1    Matsumura, F.2
  • 3
    • 0018306487 scopus 로고
    • Effect of chlorine substitution on the bacterial metabolism of various polychlorinated biphenyls
    • Furukawa, K., N. Tomizuka, and A. Kamibayashi. 1979. Effect of chlorine substitution on the bacterial metabolism of various polychlorinated biphenyls. Appl. Environ. Microbiol. 38:301-310.
    • (1979) Appl. Environ. Microbiol. , vol.38 , pp. 301-310
    • Furukawa, K.1    Tomizuka, N.2    Kamibayashi, A.3
  • 4
    • 0347113717 scopus 로고
    • Cloning and expression of pcbAB genes from Pseudomonas sp DJ-12 in Escherichia coli
    • Han, J. J., T. K. Sung, and C. K. Kim. 1993. Cloning and expression of pcbAB genes from Pseudomonas sp DJ-12 in Escherichia coli. Korean J. Microbiol. 31:129-135.
    • (1993) Korean J. Microbiol. , vol.31 , pp. 129-135
    • Han, J.J.1    Sung, T.K.2    Kim, C.K.3
  • 5
    • 0024451702 scopus 로고
    • Bacterial aromatic ring-cleavage enzymes are classified into two different gene families
    • Harayama, S., and M. Rekik. 1989. Bacterial aromatic ring-cleavage enzymes are classified into two different gene families. J. Biol. Chem. 264:15328-15333.
    • (1989) J. Biol. Chem. , vol.264 , pp. 15328-15333
    • Harayama, S.1    Rekik, M.2
  • 6
    • 0025020696 scopus 로고
    • Pseudomonas putida KF715 hphABCD operon encoding biphenyl and polychlorinated biphenyl degradation: Cloning, analysis, and expression in soil bacteria
    • Hayase, N., K. Taira, and K. Furukawa. 1990. Pseudomonas putida KF715 hphABCD operon encoding biphenyl and polychlorinated biphenyl degradation: cloning, analysis, and expression in soil bacteria. J. Bacteriol. 172:1160-1164.
    • (1990) J. Bacteriol. , vol.172 , pp. 1160-1164
    • Hayase, N.1    Taira, K.2    Furukawa, K.3
  • 7
    • 0021253525 scopus 로고
    • Unidirectional digestion with exonuclease III creates targeted break points for DNA sequencing
    • Henikoff, S. 1984. Unidirectional digestion with exonuclease III creates targeted break points for DNA sequencing. Gene 28:351-359.
    • (1984) Gene , vol.28 , pp. 351-359
    • Henikoff, S.1
  • 8
    • 0028270983 scopus 로고
    • Functional and structural relationship of various extradiol aromatic ring-cleavage dioxygenases of Pseudomonas origin
    • Hirose, J., N. Kimura, A. Suyama, A. Kobayashi, S. Hayashida, and K. Furukawa. 1994. Functional and structural relationship of various extradiol aromatic ring-cleavage dioxygenases of Pseudomonas origin. FEMS Microb. Lett. 118:273-278.
    • (1994) FEMS Microb. Lett. , vol.118 , pp. 273-278
    • Hirose, J.1    Kimura, N.2    Suyama, A.3    Kobayashi, A.4    Hayashida, S.5    Furukawa, K.6
  • 9
    • 0028287911 scopus 로고
    • The biphenyl/polychlorinated biphenyl-degradation locus (bph) of Pseudomonas sp. LB400 encodes four additional metabolic enzymes
    • Hofer, B., S. Backhaus, and K. N. Timmis. 1994. The biphenyl/polychlorinated biphenyl-degradation locus (bph) of Pseudomonas sp. LB400 encodes four additional metabolic enzymes. Gene 144:9-16.
    • (1994) Gene , vol.144 , pp. 9-16
    • Hofer, B.1    Backhaus, S.2    Timmis, K.N.3
  • 10
    • 0027198281 scopus 로고
    • Genetic analysis of a Pseudomonas locus encoding a pathway for biphenyl/polychlorinated biphenyl degradation
    • Hofer, B., L. D. Eltis, D. N. Dowling, and K. N. Timmis. 1993. Genetic analysis of a Pseudomonas locus encoding a pathway for biphenyl/polychlorinated biphenyl degradation. Gene 130:47-55.
    • (1993) Gene , vol.130 , pp. 47-55
    • Hofer, B.1    Eltis, L.D.2    Dowling, D.N.3    Timmis, K.N.4
  • 11
    • 0026095338 scopus 로고
    • DNA sequence determination of the TOL plasmid (pWWO) xylGFJ genes of Pseudomonas putida: Implications for the evolution of aromatic catabolism
    • Horn, J. M., S. Harayama, and K. N. Timmis. 1991. DNA sequence determination of the TOL plasmid (pWWO) xylGFJ genes of Pseudomonas putida: implications for the evolution of aromatic catabolism. Mol. Microbiol. 5:2459-2474.
    • (1991) Mol. Microbiol. , vol.5 , pp. 2459-2474
    • Horn, J.M.1    Harayama, S.2    Timmis, K.N.3
  • 12
    • 0022622043 scopus 로고
    • Nucleotide sequence of a DNA segment promoting transcription in Pseudomonas putida
    • Inouye, S., Y. Asai, A. Nakazawa, and T. Nakazawa. 1986. Nucleotide sequence of a DNA segment promoting transcription in Pseudomonas putida. J. Bacteriol. 166:739-745.
    • (1986) J. Bacteriol. , vol.166 , pp. 739-745
    • Inouye, S.1    Asai, Y.2    Nakazawa, A.3    Nakazawa, T.4
  • 13
    • 0025757146 scopus 로고
    • Expression, localization, and functional analysis of polychlorinated biphenyl degradation genes cbpABCD of Pseudomonas putida
    • Khan, A., and S. Walia. 1991. Expression, localization, and functional analysis of polychlorinated biphenyl degradation genes cbpABCD of Pseudomonas putida. Appl. Environ. Microbiol. 57:1325-1332.
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 1325-1332
    • Khan, A.1    Walia, S.2
  • 14
    • 0028241452 scopus 로고
    • Nucleotide sequence and functional analysis of the meto-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102
    • Kikuchi, Y., Y. Yasukochi, Y. Nagata, M. Fukuda, and M. Takagi. 1994. Nucleotide sequence and functional analysis of the meto-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102. J. Bacteriol. 176:4269-4276.
    • (1994) J. Bacteriol. , vol.176 , pp. 4269-4276
    • Kikuchi, Y.1    Yasukochi, Y.2    Nagata, Y.3    Fukuda, M.4    Takagi, M.5
  • 15
    • 0345441438 scopus 로고
    • Cloning and expression of pcbCD genes in Escherichia coli from Pseudomonas sp. DJ-12
    • Kim, C. K., T. K. Sung, J. H. Nan, Y. C. Kim, and J. K. Lee. 1994. Cloning and expression of pcbCD genes in Escherichia coli from Pseudomonas sp. DJ-12. Korean J. Microbiol. 32:40-46.
    • (1994) Korean J. Microbiol. , vol.32 , pp. 40-46
    • Kim, C.K.1    Sung, T.K.2    Nan, J.H.3    Kim, Y.C.4    Lee, J.K.5
  • 16
    • 0024562664 scopus 로고
    • Cloning and sequencing of two tandem genes involved in degradation of 2,3-dihydroxybiphenyl to benzole acid in the polychlorinated biphenyl-degrading soil bacterium Pseudomonas sp. strain KKS102
    • Kimbara, K., T. Hashimoto, M. Fukuda, T. Koana, M. Takagi, M. Oishi, and K. Yano. 1989. Cloning and sequencing of two tandem genes involved in degradation of 2,3-dihydroxybiphenyl to benzole acid in the polychlorinated biphenyl-degrading soil bacterium Pseudomonas sp. strain KKS102. J. Bacteriol. 171:2740-2747.
    • (1989) J. Bacteriol. , vol.171 , pp. 2740-2747
    • Kimbara, K.1    Hashimoto, T.2    Fukuda, M.3    Koana, T.4    Takagi, M.5    Oishi, M.6    Yano, K.7
  • 17
    • 0028247312 scopus 로고
    • Comparison of enzymatic and immunochemical properties of 2,3-dihydroxybiphenyl-l,2-dioxygenases from four Pseudomonas strains
    • Lee, J., T. K. Sung, J. Moon, K. R. Min, C. K. Kim, and Y. Kim. 1994. Comparison of enzymatic and immunochemical properties of 2,3-dihydroxybiphenyl-l,2-dioxygenases from four Pseudomonas strains. FEMS Microb. Lett. 120:355-362.
    • (1994) FEMS Microb. Lett. , vol.120 , pp. 355-362
    • Lee, J.1    Sung, T.K.2    Moon, J.3    Min, K.R.4    Kim, C.K.5    Kim, Y.6
  • 18
    • 0028797047 scopus 로고
    • Multiple genes encoding 2,3-dihydroxybiphenyl 1,2-dioxygenase in the gram-positive polychlo-rinated biphenyl-degrading bacterium Rhodococcus etythropolis TA421, isolated from a termite ecosystem
    • Maeda, M., S.-Y. Chung, E. Song, and T. Kudo. 1995. Multiple genes encoding 2,3-dihydroxybiphenyl 1,2-dioxygenase in the gram-positive polychlo-rinated biphenyl-degrading bacterium Rhodococcus etythropolis TA421, isolated from a termite ecosystem. Appl. Environ. Microbiol. 61:549-555.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 549-555
    • Maeda, M.1    Chung, S.-Y.2    Song, E.3    Kudo, T.4
  • 19
    • 0021212955 scopus 로고
    • Microbiol biodegradation of 4-chlorobiphenyl, a model compound of chlorinated biphenyls
    • Masse, R., F. Messier, L. Peloquin, C. Ajotte, and M. Sylvestre. 1984. Microbiol biodegradation of 4-chlorobiphenyl, a model compound of chlorinated biphenyls. Appl. Environ. Microbiol. 47:947-951.
    • (1984) Appl. Environ. Microbiol. , vol.47 , pp. 947-951
    • Masse, R.1    Messier, F.2    Peloquin, L.3    Ajotte, C.4    Sylvestre, M.5
  • 20
    • 0025737846 scopus 로고
    • Location and sequence of the todF gene encoding 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase in Pseudomonas putida F1
    • Menn, F. M., G. J. Zylstra, and D. T. Gibson. 1991. Location and sequence of the todF gene encoding 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase in Pseudomonas putida F1. Gene 104:91-94.
    • (1991) Gene , vol.104 , pp. 91-94
    • Menn, F.M.1    Zylstra, G.J.2    Gibson, D.T.3
  • 21
    • 3043003454 scopus 로고
    • Homology analysis among the biphenyl and 4-chlorobiphenyl degrading genes by Southern hybridization
    • Nam, J. H., C. K. Kim, J. K. Lee, and K. J. Lee. 1994. Homology analysis among the biphenyl and 4-chlorobiphenyl degrading genes by Southern hybridization. Korean J. Appl. Microbiol. Biotechnol. 22:37-44.
    • (1994) Korean J. Appl. Microbiol. Biotechnol. , vol.22 , pp. 37-44
    • Nam, J.H.1    Kim, C.K.2    Lee, J.K.3    Lee, K.J.4
  • 22
    • 0025363368 scopus 로고
    • Nucleotide sequences of the meta-cleavage pathway enzymes 2-hydroxymuconic semialdehyde dehydrogenase and 2-hydroxymuconic semialdehyde hydrolase
    • Nordlund, I., and V. Shingler. 1990. Nucleotide sequences of the meta-cleavage pathway enzymes 2-hydroxymuconic semialdehyde dehydrogenase and 2-hydroxymuconic semialdehyde hydrolase. Biochim. Biophys. Acta 1049:227-230.
    • (1990) Biochim. Biophys. Acta , vol.1049 , pp. 227-230
    • Nordlund, I.1    Shingler, V.2
  • 25
    • 0029032311 scopus 로고
    • Conversion of chlorobiphenyls into phenylhexadienoates and benzoates by the enzymes of the upper pathway for polychlorobiphenyl degradation encoded by the bph locus of Pseudomonas sp. strain LB400
    • Seeger, M., K. N. Timmis, and B. Hofer. 1995. Conversion of chlorobiphenyls into phenylhexadienoates and benzoates by the enzymes of the upper pathway for polychlorobiphenyl degradation encoded by the bph locus of Pseudomonas sp. strain LB400. Appl. Environ. Microbiol. 61:2654-2658.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 2654-2658
    • Seeger, M.1    Timmis, K.N.2    Hofer, B.3
  • 26
    • 0024300820 scopus 로고
    • Cloning and nucleotide sequence of the 2.3-dihydroxybiphenyl dioxygenase gene from the PCB-degrading strain of Pseudomonas paucimobilis Q1
    • Taira, K., N. Hayase, N. Arimura, S. Yamashita, T. Miyazaki, and K. Funikawa. 1988. Cloning and nucleotide sequence of the 2.3-dihydroxybiphenyl dioxygenase gene from the PCB-degrading strain of Pseudomonas paucimobilis Q1. Biochemistry 27:3990-3996.
    • (1988) Biochemistry , vol.27 , pp. 3990-3996
    • Taira, K.1    Hayase, N.2    Arimura, N.3    Yamashita, S.4    Miyazaki, T.5    Funikawa, K.6
  • 27
    • 0026640186 scopus 로고
    • Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707
    • Taira, K., J. Hirose, S. Hayashida, and K. Furukawa. 1992. Analysis of bph operon from the polychlorinated biphenyl-degrading strain of Pseudomonas pseudoalcaligenes KF707. J. Biol. Chem. 267:4844-4853.
    • (1992) J. Biol. Chem. , vol.267 , pp. 4844-4853
    • Taira, K.1    Hirose, J.2    Hayashida, S.3    Furukawa, K.4
  • 28
    • 0038381344 scopus 로고
    • Divergence of the cbp genes in 4-chlorobiphenyl catabolizing bacteria
    • Yun, D. J., J. J. Han, C. K. Kim, and Y. Kim. 1992. Divergence of the cbp genes in 4-chlorobiphenyl catabolizing bacteria. Korean J. Microbiol. 30:53-59.
    • (1992) Korean J. Microbiol. , vol.30 , pp. 53-59
    • Yun, D.J.1    Han, J.J.2    Kim, C.K.3    Kim, Y.4
  • 29
    • 0024427069 scopus 로고
    • Toluene degradation by Pseudomonas putida F1
    • Zylstra, G. J., and D. T. Gibson. 1989. Toluene degradation by Pseudomonas putida F1. J. Biol. Chem. 264:14940-14946.
    • (1989) J. Biol. Chem. , vol.264 , pp. 14940-14946
    • Zylstra, G.J.1    Gibson, D.T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.