메뉴 건너뛰기




Volumn 142, Issue 3, 1996, Pages 853-863

Analysis of the 5′ junctions of R2 insertions with the 28S gene: Implications for non-LTR retrotransposition

Author keywords

[No Author keywords available]

Indexed keywords

ENDONUCLEASE; RIBOSOME DNA; RIBOSOME RNA; RNA DIRECTED DNA POLYMERASE;

EID: 0029670588     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (58)

References (44)
  • 2
    • 0025098497 scopus 로고
    • I transposable elements and I-R hybrid dysgenesis in Drosophila
    • BUCHET ON, A. 1990 I transposable elements and I-R hybrid dysgenesis in Drosophila. Trends Genet. 6: 16-21.
    • (1990) Trends Genet. , vol.6 , pp. 16-21
    • Bucheton, A.1
  • 3
    • 0023351699 scopus 로고
    • The site-specific ribosomal insertion element type II of Bombyx mon (R2Bm) contains the coding sequence tor a reverse transcriptase-like enzyme
    • BURKE, W. D., C. C. CACALANG and T. H. EICKBUSH, 1987 The site-specific ribosomal insertion element type II of Bombyx mon (R2Bm) contains the coding sequence tor a reverse transcriptase-like enzyme. Mol Cell. Biol 7: 2221-2230.
    • (1987) Mol Cell. Biol , vol.7 , pp. 2221-2230
    • Burke, W.D.1    Cacalang, C.C.2    Eickbush, T.H.3
  • 4
    • 0028871801 scopus 로고
    • R4, a non-LTR retrotransposon specific to the large subunit rRNA genes of nemalodes
    • BURKE, W. D., F. MüLLER and T H. EICKBUSH, 1995 R4, a non-LTR retrotransposon specific to the large subunit rRNA genes of nemalodes. Nucleic Acids Res. 23: 4628-4634.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 4628-4634
    • Burke, W.D.1    Müller, F.2    Eickbush, T.H.3
  • 5
    • 0023734473 scopus 로고
    • Novel non-templated nucleotide addition reactions catalyzed by prokaryotic and eukaryotic DNA polymerases
    • CLARK, J. M, 1988 Novel non-templated nucleotide addition reactions catalyzed by prokaryotic and eukaryotic DNA polymerases. Nucleic Acids Res. 16: 9677-9686.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 9677-9686
    • Clark, J.M.1
  • 6
    • 0019850012 scopus 로고
    • Nucleotide sequence at the boundaries between gene and insertion regions in the rDNA of D. melanogaster
    • DAWID, I. B., and M. L. REBBERT, 1981 Nucleotide sequence at the boundaries between gene and insertion regions in the rDNA of D. melanogaster. Nucleic Acids Res. 9: 5011-5020.
    • (1981) Nucleic Acids Res. , vol.9 , pp. 5011-5020
    • Dawid, I.B.1    Rebbert, M.L.2
  • 7
    • 0028158605 scopus 로고
    • The mechanism of human immunodeficiency virus reverse transcriptase-catalyzed strand transfer from internal regions of heteropolymeric RNA templates
    • DESTEFANO, J. J., R. A. BAMBARA and P. J. FAY, 1994 The mechanism of human immunodeficiency virus reverse transcriptase-catalyzed strand transfer from internal regions of heteropolymeric RNA templates. J. Biol. Chem. 269: 161-168.
    • (1994) J. Biol. Chem. , vol.269 , pp. 161-168
    • Destefano, J.J.1    Bambara, R.A.2    Fay, P.J.3
  • 8
    • 0028870386 scopus 로고
    • Vertical transmission of the retrotransposable elements R1 and R2 during the evolution of the Drosophila melanogaster species subgroup
    • EICKBUSH, D. G., and T. H. EICKBUSH, 1995 Vertical transmission of the retrotransposable elements R1 and R2 during the evolution of the Drosophila melanogaster species subgroup. Genetics 139: 671-684.
    • (1995) Genetics , vol.139 , pp. 671-684
    • Eickbush, D.G.1    Eickbush, T.H.2
  • 9
    • 0028894297 scopus 로고
    • R1 and R2 retrotransposable elements of Drosophila evolve at rates similar to those of nuclear genes
    • EICKBUSH, D. G., W. C. LATHE III, M. P. FRANCINO and T. H. EICBUSH, 1995 R1 and R2 retrotransposable elements of Drosophila evolve at rates similar to those of nuclear genes. Genetics 139: 685-695.
    • (1995) Genetics , vol.139 , pp. 685-695
    • Eickbush, D.G.1    Lathe III, W.C.2    Francino, M.P.3    Eicbush, T.H.4
  • 10
    • 0026862794 scopus 로고
    • The non-LTR class of retrotransposable elements
    • EICKBUSH, T. H., 1992 The non-LTR class of retrotransposable elements. New Biol. 4: 430-440.
    • (1992) New Biol. , vol.4 , pp. 430-440
    • Eickbush, T.H.1
  • 11
    • 0002687402 scopus 로고
    • Origin and evolutionay relationships of retroelements
    • edited by S. S. MORSE. Raven Press, New York
    • EICKBUSH, T. E, 1994 Origin and evolutionay relationships of retroelements, pp. 121-157 in The Evolutionary Biology of Viruses, edited by S. S. MORSE. Raven Press, New York.
    • (1994) The Evolutionary Biology of Viruses , pp. 121-157
    • Eickbush, T.E.1
  • 12
  • 13
    • 0002832117 scopus 로고
    • The I factor and I-R hybrid dysgenesis in Diosophila melanogaster
    • edited by D. H. BERG and M. M. HOWE. American Society of Microbiology, Washington, DC
    • FINNNEGAN, D. J., 1989 The I factor and I-R hybrid dysgenesis in Diosophila melanogaster, pp 503-517 in Mobile DNA, edited by D. H. BERG and M. M. HOWE. American Society of Microbiology, Washington, DC.
    • (1989) Mobile DNA , pp. 503-517
    • Finnnegan, D.J.1
  • 14
    • 0025635705 scopus 로고
    • Retroviral recombination and reverse transcription
    • HU, W.-S., and H. M. TEMIN, 1990 Retroviral recombination and reverse transcription. Science 250: 1227-1233.
    • (1990) Science , vol.250 , pp. 1227-1233
    • Hu, W.-S.1    Temin, H.M.2
  • 15
    • 0002110973 scopus 로고
    • LINEs and related retroposons: Long interspersed repeated sequences in the eukaryotic gemone
    • edited by D. H. BERG and M. M. HOWE. American Society of Microbiology, Washington, DC
    • HUTCHISON, C. A., S. C. HARDIES, D. D. LOEB, W. R. SHEHEE and M. H. EDGELL, 1989 LINEs and related retroposons: long interspersed repeated sequences in the eukaryotic gemone, pp 539-617 in Mobile DNA, edited by D. H. BERG and M. M. HOWE. American Society of Microbiology, Washington, DC.
    • (1989) Mobile DNA , pp. 539-617
    • Hutchison, C.A.1    Hardies, S.C.2    Loeb, D.D.3    Shehee, W.R.4    Edgell, M.H.5
  • 16
    • 0001983828 scopus 로고
    • Bacterial reverse transcriptase
    • edited by S. GOFF and A. SKALKA. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • INOUYE, S., and M. INOUYE, 1993 Bacterial reverse transcriptase, pp. 391-410 in Reverse Transcriptase, edited by S. GOFF and A. SKALKA. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1993) Reverse Transcriptase , pp. 391-410
    • Inouye, S.1    Inouye, M.2
  • 17
    • 0025269132 scopus 로고
    • Type I (R1) and Type II (R2) ribosomal DNA insertions of Drosophila melanogaster are retrotransposable elements closely related to those of Bombyx mori
    • JAKUBCZAK, J. L., Y. XIONG and T. H. EICKBUSH, 1990 Type I (R1) and Type II (R2) ribosomal DNA insertions of Drosophila melanogaster are retrotransposable elements closely related to those of Bombyx mori. J. Mol. Biol. 212: 37-52.
    • (1990) J. Mol. Biol. , vol.212 , pp. 37-52
    • Jakubczak, J.L.1    Xiong, Y.2    Eickbush, T.H.3
  • 18
    • 0026729098 scopus 로고
    • Turnover of R1 (Type 1) and R2 (Type II) retrotransposable elements in the ribosomal DNA of Drosophila melanogaster
    • JAKUBCZAK, J. L., M. K. ZENNI, R. C. WOODRUFF and T. H. EICKBUSH, 1992 Turnover of R1 (Type 1) and R2 (Type II) retrotransposable elements in the ribosomal DNA of Drosophila melanogaster. Genetics 131: 129-142
    • (1992) Genetics , vol.131 , pp. 129-142
    • Jakubczak, J.L.1    Zenni, M.K.2    Woodruff, R.C.3    Eickbush, T.H.4
  • 19
    • 0025908033 scopus 로고
    • An indicator gene for detection of germline retrotransposition in transgenic Drosophila demonstrates RNA-mediated transposition of the LINE 1 element
    • JENSEN, S., and T. HEIDMANN, 1991 An indicator gene for detection of germline retrotransposition in transgenic Drosophila demonstrates RNA-mediated transposition of the LINE 1 element. EMBO J. 10: 1927-1937.
    • (1991) EMBO J. , vol.10 , pp. 1927-1937
    • Jensen, S.1    Heidmann, T.2
  • 21
    • 0002636257 scopus 로고
    • Evolutionary history of reverse transcriptase
    • edited by S. GOFF and A. SKALKA Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • MCCLURE, M. A, 1993 Evolutionary history of reverse transcriptase, pp 425-444 in Reverse Transcriptase, edited by S. GOFF and A. SKALKA Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1993) Reverse Transcriptase , pp. 425-444
    • Mcclure, M.A.1
  • 22
    • 0027305131 scopus 로고
    • Introns as mobile genetic elements
    • LAMBOWITZ, A. M., and M. BELFORT, 1993 Introns as mobile genetic elements. Annu. Rev. Biochem. 62: 587-622.
    • (1993) Annu. Rev. Biochem. , vol.62 , pp. 587-622
    • Lambowitz, A.M.1    Belfort, M.2
  • 23
    • 0027145631 scopus 로고
    • Transposons in place of telomeric repeats at a Drosophila telomere
    • LEVIS, R. W., R. GANESAN, K. HOUTCHENS, L. A. TOLAR and F. M. SHEEN, 1993 Transposons in place of telomeric repeats at a Drosophila telomere. Cell. 75: 1083-1093.
    • (1993) Cell , vol.75 , pp. 1083-1093
    • Levis, R.W.1    Ganesan, R.2    Houtchens, K.3    Tolar, L.A.4    Sheen, F.M.5
  • 24
    • 0019844135 scopus 로고
    • Structure and expression of ribosomal RNA genes of Drosophila melanogaster interrupted by type-2 insertions
    • LONG, E. O., M. L. REBBERT and I. B. DAWID, 1980 Structure and expression of ribosomal RNA genes of Drosophila melanogaster interrupted by type-2 insertions. Cold Spring Harbor Symp. Quant. Biol. 45: 667-672.
    • (1980) Cold Spring Harbor Symp. Quant. Biol. , vol.45 , pp. 667-672
    • Long, E.O.1    Rebbert, M.L.2    Dawid, I.B.3
  • 25
    • 0029058441 scopus 로고
    • RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element
    • LUAN, D. D., and T. H EICKBUSH, 1995 RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element. Mol. Cell. Biol. 15: 3882-3891.
    • (1995) Mol. Cell. Biol. , vol.15 , pp. 3882-3891
    • Luan, D.D.1    Eickbush, T.H.2
  • 26
    • 0027450385 scopus 로고
    • Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site - A mechanism for non-LTR retrotransposition
    • LUAN, D. D., M. H. KORMAN, J. L. JAKUBCZAK and T. H. EICKBUSH, 1993 Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site - A mechanism for non-LTR retrotransposition. Cell 72: 595-605.
    • (1993) Cell , vol.72 , pp. 595-605
    • Luan, D.D.1    Korman, M.H.2    Jakubczak, J.L.3    Eickbush, T.H.4
  • 27
    • 0028575712 scopus 로고
    • Repair of a specific double-strand break generated within a mammalian chromosome by yeast endonuclease I-Scel
    • LUKACSOVICH, T., D. YANG and A. S. WALDMAN, 1994 Repair of a specific double-strand break generated within a mammalian chromosome by yeast endonuclease I-Scel. Nucleic Acids Res 22: 5649-5657.
    • (1994) Nucleic Acids Res , vol.22 , pp. 5649-5657
    • Lukacsovich, T.1    Yang, D.2    Waldman, A.S.3
  • 28
    • 0028902026 scopus 로고
    • Characterization of a non-long terminal repeat retro transposon cDNA (LITc) from Trypanosoma cruzi: Homolog of the first ORF with the Ape family of DNA repair enzymes
    • MARTIN, F., C. MARANON, M. OLIVARES, C ALONSO and M. C. LOPEZ, 1995 Characterization of a non-long terminal repeat retro transposon cDNA (LITc) from Trypanosoma cruzi: homolog of the first ORF with the Ape family of DNA repair enzymes. J. Mol. Biol. 247: 49-59.
    • (1995) J. Mol. Biol. , vol.247 , pp. 49-59
    • Martin, F.1    Maranon, C.2    Olivares, M.3    Alonso, C.4    Lopez, M.C.5
  • 29
    • 0019497124 scopus 로고
    • Chromosomal distribution of the major insert in D. melanogaster 28S rRNA gene
    • PEACOCK, W. J., R. APPELS, S. ENDOW and D. GLOVER, 1981 Chromosomal distribution of the major insert in D. melanogaster 28S rRNA gene. Genet. Res. 37: 209-214.
    • (1981) Genet. Res. , vol.37 , pp. 209-214
    • Peacock, W.J.1    Appels, R.2    Endow, S.3    Glover, D.4
  • 30
    • 0025778140 scopus 로고
    • Evidence for retrotransposition of the I factor, a LINE element of Drosophua melanogaster
    • PELISSON, A., D. J. FINNEGAN and A. BUCHETON, 1991 Evidence for retrotransposition of the I factor, a LINE element of Drosophua melanogaster. Proc. Natl. Acad. Sci. USA 88: 4907-4910.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 4907-4910
    • Pelisson, A.1    Finnegan, D.J.2    Bucheton, A.3
  • 31
    • 0019496338 scopus 로고
    • Arrangements and rearrangements of sequence flanking the two types of rDNA insertion in D. melanogaster
    • ROIHA, H., J. R. MILLER, L. C. WOODS and D. M. GLOVER, 1981 Arrangements and rearrangements of sequence flanking the two types of rDNA insertion in D. melanogaster. Nature 290: 749-753.
    • (1981) Nature , vol.290 , pp. 749-753
    • Roiha, H.1    Miller, J.R.2    Woods, L.C.3    Glover, D.M.4
  • 32
    • 0022976432 scopus 로고
    • Nonhomologous recombination in mammalian cells: Role for short sequence homologies in the joining reaction
    • ROTH, D. B., and J. H. WILSON, 1986 Nonhomologous recombination in mammalian cells: role for short sequence homologies in the joining reaction. Mol. Cell. Biol. 6: 4295-4304.
    • (1986) Mol. Cell. Biol. , vol.6 , pp. 4295-4304
    • Roth, D.B.1    Wilson, J.H.2
  • 34
    • 0000554795 scopus 로고
    • Cin4, an insert altering the stucture of the Al gene in Zea mays, exhibits properties of nonviral retrotransposons
    • SCHWARZ-SOMMER, Z., L. LECLERCQ, E. GOBEL and H. SAEDLER, 1987 Cin4, an insert altering the stucture of the Al gene in Zea mays, exhibits properties of nonviral retrotransposons. EMBO J. 6; 3873-3880.
    • (1987) EMBO J. , vol.6 , pp. 3873-3880
    • Schwarz-Sommer, Z.1    Leclercq, L.2    Gobel, E.3    Saedler, H.4
  • 35
    • 0020541955 scopus 로고
    • The double-strand-break repair model of recombination
    • SZOSTAK, J. W., T. L. ORR-WEAVER, R. J. ROTHSTEIN and F. W. STAHL, 1983 The double-strand-break repair model of recombination. Cell 33: 25-35.
    • (1983) Cell , vol.33 , pp. 25-35
    • Szostak, J.W.1    Orr-Weaver, T.L.2    Rothstein, R.J.3    Stahl, F.W.4
  • 36
    • 0027074470 scopus 로고
    • A mechanism for deletion formation in DNA by human cell extracts: The involvement of short sequence repeats
    • THACKER, J. J. CHALK, A. GANESH and P. NORTH, 1992 A mechanism for deletion formation in DNA by human cell extracts: the involvement of short sequence repeats. Nucleic Acids Res. 20: 6183-6188.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 6183-6188
    • Thacker, J.1    Chalk, J.2    Ganesh, A.3    North, P.4
  • 37
    • 0026622006 scopus 로고
    • Retroviral reverse transcription and integration: Process and problems
    • WHITCOMB, J. M., and S. H. HUGHES, 1992 Retroviral reverse transcription and integration: process and problems. Annu Rev Cell Biol. 8: 275-306.
    • (1992) Annu Rev Cell Biol. , vol.8 , pp. 275-306
    • Whitcomb, J.M.1    Hughes, S.H.2
  • 38
    • 0028819607 scopus 로고
    • Strand transfer mediated by human immunodeficiency virus reverse transcriptase in vitro is promoted by pausing and results in misincorporation
    • WU, W. M., B. M, BLUMBERG, P. J. FAY and R. A. BAMBARA, 1995 Strand transfer mediated by human immunodeficiency virus reverse transcriptase in vitro is promoted by pausing and results in misincorporation. J. Biol. Chem. 270: 325-332.
    • (1995) J. Biol. Chem. , vol.270 , pp. 325-332
    • Wu, W.M.1    Blumberg, B.M.2    Fay, P.J.3    Bambara, R.A.4
  • 39
    • 0023691433 scopus 로고
    • Similarity of reverse transcriptase-like sequences of viruses, transposable elements, and mitochondrial in trons
    • XIONG, Y., and T. H. EICKBUSH, 1988a Similarity of reverse transcriptase-like sequences of viruses, transposable elements, and mitochondrial in trons. Mol. Biol. Evol. 5: 675-690.
    • (1988) Mol. Biol. Evol. , vol.5 , pp. 675-690
    • Xiong, Y.1    Eickbush, T.H.2
  • 40
    • 0024293991 scopus 로고
    • Functional expression of a sequence-specific endonuclease encoded by the retrotransposon R2Bm
    • XIONG, Y., and T. H. EICKBUSH, 1988b Functional expression of a sequence-specific endonuclease encoded by the retrotransposon R2Bm. Cell 55: 235-246.
    • (1988) Cell , vol.55 , pp. 235-246
    • Xiong, Y.1    Eickbush, T.H.2
  • 41
    • 0025006614 scopus 로고
    • Origin and evolution of retroelements based upon their reverse transcriptase sequences
    • XIONG, Y., and T. H. EICKBUSH, 1990 Origin and evolution of retroelements based upon their reverse transcriptase sequences. EMBO J. 9: 3353-3362.
    • (1990) EMBO J. , vol.9 , pp. 3353-3362
    • Xiong, Y.1    Eickbush, T.H.2
  • 42
    • 0027339344 scopus 로고
    • Rate and mechanism of nonhomologous recombination during a single cycle of retroviral replication
    • ZHANG, J., and H. M. TEMIN, 1993 Rate and mechanism of nonhomologous recombination during a single cycle of retroviral replication. Science 259: 234-238.
    • (1993) Science , vol.259 , pp. 234-238
    • Zhang, J.1    Temin, H.M.2
  • 43
    • 0028274130 scopus 로고
    • Retroviral recombination depends on the length of sequence identity and is not error prone
    • ZHANG, J., and H. M. TEMIN, 1994 Retroviral recombination depends on the length of sequence identity and is not error prone. J. Virol. 68: 2409-2414.
    • (1994) J. Virol. , vol.68 , pp. 2409-2414
    • Zhang, J.1    Temin, H.M.2
  • 44
    • 0029162089 scopus 로고
    • Group II intron mobility occurs by target DNA-primed reverse transcription
    • ZIMMERLY, S , H. GUO, P. S. PERLMAN and A. M. LAMBOWITZ, 1995 Group II intron mobility occurs by target DNA-primed reverse transcription. Cell 82: 1-10.
    • (1995) Cell , vol.82 , pp. 1-10
    • Zimmerly, S.1    Guo, H.2    Perlman, P.S.3    Lambowitz, A.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.