메뉴 건너뛰기




Volumn 42, Issue 4, 1996, Pages 382-391

Investigations of subterranean bacteria in deep crystalline bedrock and their importance for the disposal of nuclear waste

Author keywords

16S rRNA; diversity; microbial activity; nuclear waste; sulfate reduction

Indexed keywords

RADIOISOTOPE; RNA 16S; SULFATE;

EID: 0029667960     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/m96-054     Document Type: Review
Times cited : (91)

References (64)
  • 2
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann, R.I., Ludwig, W., and Schleifer, K.-H. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59: 143-169.
    • (1995) Microbiol. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.-H.3
  • 3
    • 0025916886 scopus 로고
    • Gas metabolism of microorganisms
    • Bachofen, R. 1991. Gas metabolism of microorganisms. Experientia, 47:508-513.
    • (1991) Experientia , vol.47 , pp. 508-513
    • Bachofen, R.1
  • 4
    • 0024845067 scopus 로고
    • Numbers, diversity and morphological characteristics of aerobic chemoheterotrophic bacteria in deep subsurface sediments from a site in South Carolina, U.S.A.
    • Balkwill, D.L. 1989. Numbers, diversity and morphological characteristics of aerobic chemoheterotrophic bacteria in deep subsurface sediments from a site in South Carolina, U.S.A. Geomicrobiol. J. 7: 33-52.
    • (1989) Geomicrobiol. J. , vol.7 , pp. 33-52
    • Balkwill, D.L.1
  • 5
    • 0000411498 scopus 로고
    • Vertical and horizontal variations in the physiological diversity of the aerobic chemoheterotrophic bacterial microflora in deep Southeast coastal plain subsurface sediments
    • Balkwill, D.L., Fredrickson, J.K., and Thomas, J.M. 1989. Vertical and horizontal variations in the physiological diversity of the aerobic chemoheterotrophic bacterial microflora in deep Southeast coastal plain subsurface sediments. Appl. Environ. Microbiol. 55: 1058-1065.
    • (1989) Appl. Environ. Microbiol. , vol.55 , pp. 1058-1065
    • Balkwill, D.L.1    Fredrickson, J.K.2    Thomas, J.M.3
  • 7
    • 0025333082 scopus 로고
    • Complexing agents from microorganisms
    • Birch, L., and Bachofen, R. 1990. Complexing agents from microorganisms. Experientia, 46: 827-834.
    • (1990) Experientia , vol.46 , pp. 827-834
    • Birch, L.1    Bachofen, R.2
  • 8
    • 0029120869 scopus 로고
    • Comparison of phenotypical and molecular methods for the identification of bacterial strains isolated from a deep subsurface environment
    • Boivin-Jahns, V., Bianchi, A., Ruimy, R., Garcin, J., Daumas, S., and Christen, R. 1995. Comparison of phenotypical and molecular methods for the identification of bacterial strains isolated from a deep subsurface environment. Appl. Environ. Microbiol. 61: 3400-3406.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 3400-3406
    • Boivin-Jahns, V.1    Bianchi, A.2    Ruimy, R.3    Garcin, J.4    Daumas, S.5    Christen, R.6
  • 11
    • 0019174557 scopus 로고
    • The hydrophobicity of bacteria - An important factor in their initial adhesion to the air-water interface
    • Dahlbäck, B., Hermansson, M., Kjelleberg, S., and Norkrans, B. 1981. The hydrophobicity of bacteria - an important factor in their initial adhesion to the air-water interface. Arch. Microbiol. 128: 267-270.
    • (1981) Arch. Microbiol. , vol.128 , pp. 267-270
    • Dahlbäck, B.1    Hermansson, M.2    Kjelleberg, S.3    Norkrans, B.4
  • 12
    • 0028092810 scopus 로고
    • Carbon transformations by attached bacterial populations in granitic ground water from deep crystalline bed-rock of the Stripa research mine
    • Ekendahl, S., and Pedersen, K. 1994. Carbon transformations by attached bacterial populations in granitic ground water from deep crystalline bed-rock of the Stripa research mine. Microbiology, 140: 1565-1573.
    • (1994) Microbiology , vol.140 , pp. 1565-1573
    • Ekendahl, S.1    Pedersen, K.2
  • 13
    • 0028037684 scopus 로고
    • Characterization of attached bacterial populations in deep granitic groundwater from the Stripa research mine with 16S-rRNA gene sequencing technique and scanning electron microscopy
    • Ekendahl, S., Arlinger, J., Ståhl, F., and Pedersen, K. 1994. Characterization of attached bacterial populations in deep granitic groundwater from the Stripa research mine with 16S-rRNA gene sequencing technique and scanning electron microscopy. Microbiology, 140: 1575-1583.
    • (1994) Microbiology , vol.140 , pp. 1575-1583
    • Ekendahl, S.1    Arlinger, J.2    Ståhl, F.3    Pedersen, K.4
  • 15
    • 0026585263 scopus 로고
    • How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity
    • Fox, G.E., Wisotzkey, J.D., and Jurtshuk, P., Jr. 1992. How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity. Int. J. Syst. Bacteriol. 42: 166-170.
    • (1992) Int. J. Syst. Bacteriol. , vol.42 , pp. 166-170
    • Fox, G.E.1    Wisotzkey, J.D.2    Jurtshuk Jr., P.3
  • 16
    • 0025362621 scopus 로고
    • Microbial dissolution and stabilization of toxic metals and radionuclides in mixed wastes
    • Francis, A. J. 1990. Microbial dissolution and stabilization of toxic metals and radionuclides in mixed wastes. Experientia, 46: 840-851.
    • (1990) Experientia , vol.46 , pp. 840-851
    • Francis, A.J.1
  • 17
    • 0001382880 scopus 로고
    • Anaerobic microbial dissolution of transition and heavy metal oxides
    • Francis, A. J., and Dodge, C. J. 1988. Anaerobic microbial dissolution of transition and heavy metal oxides. Appl. Environ. Microbiol. 54: 1009-1014.
    • (1988) Appl. Environ. Microbiol. , vol.54 , pp. 1009-1014
    • Francis, A.J.1    Dodge, C.J.2
  • 18
    • 0024794538 scopus 로고
    • Denitrification in deep subsurface sediments
    • Francis, A.J., Slater, J.M., and Dodge, C.J. 1989. Denitrification in deep subsurface sediments. Geomicrobiol. J. 7: 103-116.
    • (1989) Geomicrobiol. J. , vol.7 , pp. 103-116
    • Francis, A.J.1    Slater, J.M.2    Dodge, C.J.3
  • 20
    • 0025919183 scopus 로고
    • Physiological diversity and distributions of heterotrophic bacteria in deep cretaceous sediments of the Atlantic coastal plain
    • Fredrickson, J.K., Balkwill, D.L., Zachara, J.M., Li, S.-M.W., Brockman, F. J., and Simmons, M.A. 1991. Physiological diversity and distributions of heterotrophic bacteria in deep cretaceous sediments of the Atlantic coastal plain. Appl. Environ. Microbiol. 57: 402-411.
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 402-411
    • Fredrickson, J.K.1    Balkwill, D.L.2    Zachara, J.M.3    Li, S.-M.W.4    Brockman, F.J.5    Simmons, M.A.6
  • 21
    • 0023757652 scopus 로고
    • Microbial ecology of the terrestrial subsurface
    • Ghiorse, W.C., and Wilson, J.T. 1988. Microbial ecology of the terrestrial subsurface. Adv. Appl. Microbiol. 33: 107-172.
    • (1988) Adv. Appl. Microbiol. , vol.33 , pp. 107-172
    • Ghiorse, W.C.1    Wilson, J.T.2
  • 25
    • 51249175832 scopus 로고
    • Comparison of bacteria from deep subsurface sediment and adjacent groundwater
    • Hazen, T.C., Jiménez, L., López de Victoria, G., and Fliermans, C.B. 1991. Comparison of bacteria from deep subsurface sediment and adjacent groundwater. Microb. Ecol. 22: 293-304.
    • (1991) Microb. Ecol. , vol.22 , pp. 293-304
    • Hazen, T.C.1    Jiménez, L.2    López De Victoria, G.3    Fliermans, C.B.4
  • 26
    • 0004843445 scopus 로고
    • Methods for enumerating microorganisms and determining biomass in natural environments
    • Herbert, R.A. 1990. Methods for enumerating microorganisms and determining biomass in natural environments. Methods Microbiol. 22: 1-39.
    • (1990) Methods Microbiol. , vol.22 , pp. 1-39
    • Herbert, R.A.1
  • 27
    • 0002088263 scopus 로고
    • Isolation and purification of nucleic acids
    • Edited by E. Stackebrandt and M. Goodfellow. John Wiley & Sons, Chichester
    • Johnson, J.L. 1991. Isolation and purification of nucleic acids. In Nucleic acid techniques in bacterial systematics. Edited by E. Stackebrandt and M. Goodfellow. John Wiley & Sons, Chichester. pp. 1-19.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 1-19
    • Johnson, J.L.1
  • 28
    • 0025890073 scopus 로고
    • Dissimilatory Fe(III) and Mn(IV) reduction
    • Lovley, D.R. 1991. Dissimilatory Fe(III) and Mn(IV) reduction. Microbiol. Rev. 55: 259-287.
    • (1991) Microbiol. Rev. , vol.55 , pp. 259-287
    • Lovley, D.R.1
  • 29
    • 0026614445 scopus 로고
    • Reduction of uranium by Desulfovibrio desulfuricans
    • Lovley, D.R., and Phillips, J.P. 1992. Reduction of uranium by Desulfovibrio desulfuricans. Appl. Environ. Microbiol. 58: 850-856.
    • (1992) Appl. Environ. Microbiol. , vol.58 , pp. 850-856
    • Lovley, D.R.1    Phillips, J.P.2
  • 30
    • 0042011114 scopus 로고
    • DNA sequencing in bacterial systematics
    • Edited by E. Stackebrandt and M. Goodfellow. John Wiley & Sons, Chichester
    • Ludwig, W. 1991. DNA sequencing in bacterial systematics. In Nucleic acid techniques in bacterial systematics. Edited by E. Stackebrandt and M. Goodfellow. John Wiley & Sons, Chichester. pp. 69-94.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 69-94
    • Ludwig, W.1
  • 33
    • 0010381767 scopus 로고
    • Surface microlayers in aquatic environments
    • Edited by M. Alexander. Plenum Press, New York
    • Norkrans, B. 1980. Surface microlayers in aquatic environments. In Advances in microbial ecology. Edited by M. Alexander. Plenum Press, New York. pp. 51-85.
    • (1980) Advances in Microbial Ecology , pp. 51-85
    • Norkrans, B.1
  • 34
    • 0020354501 scopus 로고
    • Factors regulating microbial biofilm development in a system with slowly flowing seawater
    • Pedersen, K. 1982. Factors regulating microbial biofilm development in a system with slowly flowing seawater. Appl. Environ. Microbiol. 44: 1196-1204.
    • (1982) Appl. Environ. Microbiol. , vol.44 , pp. 1196-1204
    • Pedersen, K.1
  • 35
    • 0025385817 scopus 로고
    • Biofilm development on stainless steel and PVC in drinking water
    • Pedersen, K. 1990. Biofilm development on stainless steel and PVC in drinking water. Water Res. 24: 239-243.
    • (1990) Water Res. , vol.24 , pp. 239-243
    • Pedersen, K.1
  • 36
    • 0027844149 scopus 로고
    • The deep subterranean biosphere
    • Pedersen, K. 1993a. The deep subterranean biosphere. Earth Sci. Rev. 34: 243-260.
    • (1993) Earth Sci. Rev. , vol.34 , pp. 243-260
    • Pedersen, K.1
  • 37
    • 0002062655 scopus 로고
    • Bacterial processes in nuclear waste disposal
    • Pedersen, K. 1993b. Bacterial processes in nuclear waste disposal. Microbiol. Europe, 1: 18-24.
    • (1993) Microbiol. Europe , vol.1 , pp. 18-24
    • Pedersen, K.1
  • 38
    • 0344156693 scopus 로고
    • Effect of cell number, pH and lanthanide concentration on the sorption of promethium by Shewanella putrefaciens
    • Pedersen, K., and Albinsson, Y. 1991. Effect of cell number, pH and lanthanide concentration on the sorption of promethium by Shewanella putrefaciens. Radiochim. Acta, 54: 91-95.
    • (1991) Radiochim. Acta , vol.54 , pp. 91-95
    • Pedersen, K.1    Albinsson, Y.2
  • 39
    • 0000950757 scopus 로고
    • Possible effects of bacteria on trace element migration in crystalline bed-rock
    • Pedersen, K., and Albinsson, Y. 1992. Possible effects of bacteria on trace element migration in crystalline bed-rock. Radiochim. Acta, 58/59: 365-369.
    • (1992) Radiochim. Acta , vol.58-59 , pp. 365-369
    • Pedersen, K.1    Albinsson, Y.2
  • 40
    • 0025178066 scopus 로고
    • Distribution and activity of bacteria in deep granitic groundwaters of southeastern Sweden
    • Pedersen, K., and Ekendahl, S. 1990. Distribution and activity of bacteria in deep granitic groundwaters of southeastern Sweden. Microb. Ecol. 20: 37-52.
    • (1990) Microb. Ecol. , vol.20 , pp. 37-52
    • Pedersen, K.1    Ekendahl, S.2
  • 41
    • 0026536633 scopus 로고
    • 2 and introduced organic compounds by bacterial populations in groundwater from the deep crystalline bedrock of the Stripa mine
    • 2 and introduced organic compounds by bacterial populations in groundwater from the deep crystalline bedrock of the Stripa mine. J. Gen. Microbiol. 138: 369-376.
    • (1992) J. Gen. Microbiol. , vol.138 , pp. 369-376
    • Pedersen, K.1    Ekendahl, S.2
  • 42
    • 0002573766 scopus 로고
    • 2 and introduced organic compounds by bacterial communities in ground water from Southeastern Sweden deep crystalline bedrock
    • 2 and introduced organic compounds by bacterial communities in ground water from Southeastern Sweden deep crystalline bedrock. Microb. Ecol. 22: 1-14.
    • (1992) Microb. Ecol. , vol.22 , pp. 1-14
    • Pedersen, K.1    Ekendahl, S.2
  • 44
    • 0022474098 scopus 로고
    • Statistic evaluation of the influence of species variation, culture conditions, surface wettability and fluid shear on attachment and biofilm development of marine bacteria
    • Pedersen, K., Holmström, C., Olsson, A.-K., and Pedersen, A. 1986. Statistic evaluation of the influence of species variation, culture conditions, surface wettability and fluid shear on attachment and biofilm development of marine bacteria. Arch. Microbiol. 145: 1-8.
    • (1986) Arch. Microbiol. , vol.145 , pp. 1-8
    • Pedersen, K.1    Holmström, C.2    Olsson, A.-K.3    Pedersen, A.4
  • 45
    • 0029973821 scopus 로고    scopus 로고
    • 16S rRNA gene diversity of attached and unattached eubacteria in boreholes along the access tunnel to the Äspö hard rock laboratory, Sweden
    • In press
    • Pedersen, K., Arlinger, J., Ekendahl, S., and Hallbeck, L. 1996a. 16S rRNA gene diversity of attached and unattached eubacteria in boreholes along the access tunnel to the Äspö hard rock laboratory, Sweden. FEMS Microbiol. Ecol. In press.
    • (1996) FEMS Microbiol. Ecol.
    • Pedersen, K.1    Arlinger, J.2    Ekendahl, S.3    Hallbeck, L.4
  • 46
    • 0030164089 scopus 로고    scopus 로고
    • Diversity and distribution of subterranean bacteria in ground water at Oklo in Gabon, Africa, as determined by 16S rRNA gene sequencing
    • In press
    • Pedersen, K., Arlinger, J., Hallbeck, L., and Pettersson, C. 1996b. Diversity and distribution of subterranean bacteria in ground water at Oklo in Gabon, Africa, as determined by 16S rRNA gene sequencing. Mol. Ecol. In press.
    • (1996) Mol. Ecol.
    • Pedersen, K.1    Arlinger, J.2    Hallbeck, L.3    Pettersson, C.4
  • 47
    • 0027948550 scopus 로고
    • Desiccation tolerance of Prokaryotes
    • Potts, M. 1994. Desiccation tolerance of Prokaryotes. Microbiol. Rev. 58: 755-805.
    • (1994) Microbiol. Rev. , vol.58 , pp. 755-805
    • Potts, M.1
  • 48
    • 0028173005 scopus 로고
    • The phylogenetic structure of the genus Acinetobacter
    • Rainey, F.A., Lang, E., and Stackebrandt, E. 1994. The phylogenetic structure of the genus Acinetobacter. FEMS Microbiol. Lett. 124: 349-354.
    • (1994) FEMS Microbiol. Lett. , vol.124 , pp. 349-354
    • Rainey, F.A.1    Lang, E.2    Stackebrandt, E.3
  • 50
    • 0003032551 scopus 로고
    • Aerobic hydrogen-oxidizing (Knallgas) bacteria
    • Edited by H.G. Schlegel and B. Bowien. Springer-Verlag, Berlin
    • Schlegel, H.G. 1989. Aerobic hydrogen-oxidizing (Knallgas) bacteria. In Autotrophic bacteria. Edited by H.G. Schlegel and B. Bowien. Springer-Verlag, Berlin, pp. 305-330.
    • (1989) Autotrophic Bacteria , pp. 305-330
    • Schlegel, H.G.1
  • 52
    • 0001164414 scopus 로고
    • Characterization of iron-reducing Alteromonas putrefaciens strains from oil fields fluids
    • Semple, K.M., and Westlake, D.W.S. 1987. Characterization of iron-reducing Alteromonas putrefaciens strains from oil fields fluids. Can. J. Microbiol. 33: 366-371.
    • (1987) Can. J. Microbiol. , vol.33 , pp. 366-371
    • Semple, K.M.1    Westlake, D.W.S.2
  • 55
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E., and Goebel, B.M. 1994. Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int. J. Syst. Bacteriol. 44: 846-849.
    • (1994) Int. J. Syst. Bacteriol. , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 56
    • 85035165709 scopus 로고
    • Microbial research
    • Edited by J. Cramer and J. Smellie. Swedish Nuclear Fuel and Waste Management Co., Stockholm. SKB Tech. Rep. 94-04
    • Stroes-Gascoyne, S., Francis, A.J., and Vilks, P. 1994. Microbial research. In Final report of the AECL/SKB Cigar Lake analog study. Edited by J. Cramer and J. Smellie. Swedish Nuclear Fuel and Waste Management Co., Stockholm. SKB Tech. Rep. 94-04. pp. 261-265.
    • (1994) Final Report of the AECL/SKB Cigar Lake Analog Study , pp. 261-265
    • Stroes-Gascoyne, S.1    Francis, A.J.2    Vilks, P.3
  • 58
    • 0003371415 scopus 로고
    • The genus Acinetobacter
    • Edited by A. Balows, H.G. Truper, M. Dworkin, W. Harder, and K.-Z. Schleifer. Springer-Verlag, New York
    • Tower, K.J. 1992. The genus Acinetobacter. In The Prokaryotes. Edited by A. Balows, H.G. Truper, M. Dworkin, W. Harder, and K.-Z. Schleifer. Springer-Verlag, New York. pp. 3137-3143.
    • (1992) The Prokaryotes , pp. 3137-3143
    • Tower, K.J.1
  • 59
    • 0028313806 scopus 로고
    • Visualization of the role of the gas-water interface on the fate and transport of colloids in porous media
    • Wan, J., and Wilson, J.L. 1994a. Visualization of the role of the gas-water interface on the fate and transport of colloids in porous media. Water Resour. Res. 30: 11-23.
    • (1994) Water Resour. Res. , vol.30 , pp. 11-23
    • Wan, J.1    Wilson, J.L.2
  • 60
    • 0028667224 scopus 로고
    • Colloid transport in unsaturated porous media
    • Wan, J., and Wilson, J.L. 1994b. Colloid transport in unsaturated porous media. Water Resour. Res. 30: 857-864.
    • (1994) Water Resour. Res. , vol.30 , pp. 857-864
    • Wan, J.1    Wilson, J.L.2
  • 61
    • 0025366456 scopus 로고
    • 16S rRNA sequences reveal numerous uncultured microorganisms in a natural community
    • Ward, D.M., Weller, R., and Bateson, M.M. 1990. 16S rRNA sequences reveal numerous uncultured microorganisms in a natural community. Nature (London), 345: 63-65.
    • (1990) Nature (London) , vol.345 , pp. 63-65
    • Ward, D.M.1    Weller, R.2    Bateson, M.M.3
  • 62
    • 85143848022 scopus 로고
    • Ribosomal RNA analysis of microorganisms as they occur in nature
    • Edited by K.C. Marshall. Plenum Press Inc., New York
    • Ward, D.M., Bateson, M.M., Weller, R., and Ruff-Roberts, A.L. 1992. Ribosomal RNA analysis of microorganisms as they occur in nature. In Advances in microbial ecology. Edited by K.C. Marshall. Plenum Press Inc., New York. pp. 219-286.
    • (1992) Advances in Microbial Ecology , pp. 219-286
    • Ward, D.M.1    Bateson, M.M.2    Weller, R.3    Ruff-Roberts, A.L.4
  • 63
    • 0001614970 scopus 로고
    • Gram-negative, mesophilic sulphate-reducing bacteria
    • Edited by A. Balows, H.G. Truper, M. Dworkin, W. Harder, and K.-Z. Schleifer. Springer-Verlag, New York
    • Widdel, F., and Bak, F. 1991. Gram-negative, mesophilic sulphate-reducing bacteria. In The prokaryotes. Edited by A. Balows, H.G. Truper, M. Dworkin, W. Harder, and K.-Z. Schleifer. Springer-Verlag, New York. pp. 3352-3378.
    • (1991) The Prokaryotes , pp. 3352-3378
    • Widdel, F.1    Bak, F.2
  • 64
    • 0023184331 scopus 로고
    • Bacterial evolution
    • Woese, C. 1987. Bacterial evolution. Microbiol. Rev. 51: 221-271.
    • (1987) Microbiol. Rev. , vol.51 , pp. 221-271
    • Woese, C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.