Widespread use of the glu-tRNAGln transamidation pathway among bacteria: A member of the α purple bacteria lacks glutaminyl-tRNA synthetase

Journal of Biological Chemistry

Volumn 271, Issue 25, 1996, Pages 14856-14863

  Gagnonl, Yves ^a   Lacoste, Lucille ^a   Champagne, Nathalie ^a   Lapointe, Jacques ^a  

^a UNIVERSITÉ LAVAL   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ALPHAPROTEOBACTERIA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; EUKARYOTA; NEGIBACTERIA; PROTEOBACTERIA; RHIZOBIUM; SINORHIZOBIUM MELILOTI;

GLUTAMINE TRANSFER RNA LIGASE; AMINO ACID TRANSFER RNA LIGASE; AMINOACYL TRANSFER RNA; GLUTAMATE TRANSFER RNA LIGASE; GLUTAMINE TRANSFER RNA; GLUTAMINYL-TRNA SYNTHETASE; ISOPROPYL THIOGALACTOSIDE; RECOMBINANT PROTEIN; TRANSFERASE; TRNA, GLUTAMIC ACID; TRNA, GLUTAMIC ACID-;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL METABOLISM; ENZYME ACTIVITY; EVOLUTION; GENE DUPLICATION; NONHUMAN; OPEN READING FRAME; PHYLOGENY; PRIORITY JOURNAL; SINORHIZOBIUM MELILOTI; BACTERIAL GENE; BIOSYNTHESIS; CHEMISTRY; COMPARATIVE STUDY; CONFIDENCE INTERVAL; ENZYME INDUCTION; ENZYMOLOGY; ESCHERICHIA COLI; GENETICS; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; PROMOTER REGION; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; AMINO ACYL-TRNA SYNTHETASES; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; CLONING, MOLECULAR; CONFIDENCE INTERVALS; ENZYME INDUCTION; ESCHERICHIA COLI; GENES, BACTERIAL; GLUTAMATE-TRNA LIGASE; ISOPROPYL THIOGALACTOSIDE; MOLECULAR SEQUENCE DATA; PHYLOGENY; PROMOTER REGIONS (GENETICS); RECOMBINANT PROTEINS; RNA, TRANSFER, AMINO ACYL; RNA, TRANSFER, GLN; SEQUENCE HOMOLOGY, AMINO ACID; SINORHIZOBIUM MELILOTI; TRANSFERASES;

EID: 0029666265     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.271.25.14856     Document Type: Article

References (68)

1. Amann, E., Ochs, B., and Abel, K.-J. (1988) Gene (Amst.) 69, 301-315
2. Ausubel, F. M., Brent, R., Kingston, R. E., Moore, D. D., Seidman, J. G., Smith, J. A., and Strahl, K. (1989) Current Protocols in Molecular Biology, Greene Publishing Associates & Wiley-Interscience, New York
3. Bachmann, B. J. (1990) Microbiol. Rev. 54, 130-197
4. Bordeleau, L. M., Antoun, H., and Lachance, R. A. (1977) Can. J Plant Sci. 57, 433-439
5. Breton, R. (1990) Étude de l'Evolution des Aminoacyl-tRNA Synthétases Spécifiques au Glutamate et à la Glutamine chez Escherichia coli, Bacillus subtilis et Bacillus stearothermophilus. Ph.D. thesis, Université Laval, Québec, Canada
6. Breton, R., Sanfaçon, H., Papayannopoulos, I., Biemann, K., and Lapointe, J. (1986) J. Biol. Chem. 261, 10610-10617
7. Breton, R., Watson, D., Yaguchi, M., and Lapointe, J. (1990) J. Biol. Chem. 265, 18248-18255
8. Brown, J. R., and Doolittle, W. F. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 2441-2445
9. Brunie, S., Zelwer, C., and Risler, J.-L. (1990) J. Mol. Biol. 216, 411-424
10. Cerini, C., Kerjan, P., Astier, M., Gratecos, D., Mirande, M., and Sémériva, M. (1991) EMBO J. 10, 4267-4277
11. Chung, C. T., Niemela, S. L., and Miller, R. H. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 8275-8279
12. Cousineau, B., Cerpa, C., Lefebvre, J., and Cedergren, R. (1992) Gene (Amst.) 120, 33-41
13. Cusack, S., Berthet-Colominas, C., Härtlein, M., Nassar, N., and Leberman, R. (1990) Nature 347, 249-255
14. Dayhoff, M. O., Schwartz, R. M., and Orcutt, B. C. (1978) in Atlas of Protein Sequence and Structure (Dayhoff, M. O., ed) Vol. 5, Suppl. 3, pp. 345-452, National Biochemical Research Foundation, Washington, D. C.
15. Devereux, J., Haeberli, P., and Smithies, O. (1984) Nucleic Acids Res. 12, 387-395
16. Dickerson, R. E. (1980) Nature 283, 210-211
17. Dybvig, K., and Yu, H. (1994) Mol. Microbiol. 12, 547-560
18. Eriani, G., Delarue, M., Poch, O., Gangloff, J., and Moras, D. (1990) Nature 347, 203-206
19. Falah, M., and Gupta, R. S. (1994) J. Bacterial. 176, 7748-7753
20. Felsenstein, J. (1988) Annu. Rev. Genet. 22, 521-565
21. Fett, R., and Knippers, R. (1991) J. Biol. Chem. 266, 1448-1455
22. Fujita, N., Mori, H., Yura, T., and Ishihama, A. (1994) Nucleic Acids Res. 22, 1637-1639
23. Golding, G. B., and Gupta, R. S. (1995) Mol. Biol. Evol. 12, 1-6
24. Gray, M. W. (1992) Int. Rev. Cytol. 141, 233-357
25. Gupta, R. (1984) J. Biol. Chem. 269, 9461-9471
26. Hanahan, D. (1983) J. Mol. Biol. 166, 557-580
27. Iwabe, N., Kuma, K., Hasegawa, M., Osawa, S., and Miyata, T. (1989) Proc. Natt. Acad. Sci. U. S. A. 86, 9355-9359
28. Kang, P. J., and Craig, E. A. (1990) J. Bacterial. 172, 2055-2064
29. Kern, D., and Lapointe, J. (1979) Biochemistry 18, 5809-5818
30. Kern, D., Potier, S., Boulanger, Y., and Lapointe, J. (1979) J. Biol. Chem. 254, 518-524
31. Laberge, S., Gagnon, Y., Bordeleau, L. M., and Lapointe, J. (1989) J. Bacteriol. 171, 3926-3932
32. Laemmli, U. K. (1970) Nature 227, 680-685
33. Lake, J. A. (1988) Nature 331, 184-186
34. Lamour, V., Quevillon, S., Diriong, S., N'Guyen, V. C., Lipinski, M., and Mirande, M. (1994) Proc. Natl. Acad. Sci. U. S. A. 91, 8670-8674
35. Lapointe, J. (1982) Can. J. Biochem. 60, 471-474
36. Lapointe, J., Duplain, L., and Proulx, M. (1986) J. Bacterial. 165, 88-93
37. Lin, S. X., Brisson, A., Liu, J., Roy, P., and Lapointe, J. (1992) Protein Expression Purif. 3, 71-74
38. Ludmerer, S. W., and Schimmel, P. (1987) J. Biol. Chem. 262, 10801-10806
39. Nagel, G. M., and Doolittle, R. F. (1991) Proc. Natl. Acad. Sci. U.S.A. 88, 8122-8125
40. Nagel, G. M., and Doolittle, R. F. (1995) J. Mol. Evol. 40, 487-498
41. Nureki, O., Susuki, K., Hara-Yokoyama, M., Kohno, T., Matsuzawa, H., Ohta, T., Shimizu, T., Morikawa, K., Miyazawa, T., and Yokoyama, S. (1992) Eur. J. Biochem. 204, 465-472
42. Nureki, O., Vassylyev, D. G., Katayanagi, K., Shimizu, S.-L, Sekine, T., Miyazawa, T., Yokoyama, S., and Morikawa, K. (1995) Science 267, 1958-1965
43. Olsen, G. J., Woese, C. R, and Overbeek, R. (1994) J. Bacteriol. 176, 1-6
44. Perona, J. J., Rould, M. A., and Steitz, T. A. (1993) Biochemistry 32, 8758-8771
45. Rogers, K. C., and Söll, D. (1993) Biochemistry 32, 14210-14219
46. Rogers, K. C., and Söll, D. (1995) J. Mol. Evol. 40, 476-481
47. Rould, M. A., Perona, J. J., Söll, D., and Steitz, T. A. (1989) Science 246,1135-1142
48. Ruft, M., Krishnaswamy, S., Boeglin, M., Poterszman, A., Mitschier, A., Podjarny, A., Rees, B., Thierry, J. C., and Moras, D. (1991) Science 252, 1682-1689
49. Russell, R. R. B., and Pittard, A. J. (1971) J. Bacteriol. 108, 790-798
50. Saitou, N., and Nei, M. (1987) Mol. Biol. Evol. 4, 406-425
51. Schimmel, P., and Ribas de Pouplana, L. (1995) Cell 81, 983-986
52. Schimmel, P., Giegé, R., Moras, D., and Yokoyama, S. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 8763-8768
53. Schön, A., Kannangara, C. G., Gough, S., and Söll, D. (1988) Nature 331,187-190
54. Shields, J. M. (1993) Characterization of Glutaminyl-tRNA Synthetase Gene from Giardia. Ph.D. thesis, Cleveland State University
55. Sogin, M. L., Gunderson, J. H., Elwood, H. J., Alonso, R. A., and Peattie, D. A. (1989) Science 243, 75-77
56. Strauch, M. A., Zalkin, H., and Aronson, A. I. (1988) J. Bacteriol. 170, 916-920
57. Viale, A. M., and Arakaki, A. K. (1994) FEES Lett. 341, 146-151
58. Vincent, J. M. (1970) IBP Handb. 15, 121-123
59. White, B. N., and Bayley, S. T. (1972) Can. J. Biochem. 50, 600-609
60. Wichlan, D. G., and Hatch, T. P. (1993) J. Bacteriol. 175, 2936-2942
61. Wilcox, M., and Nirenberg, M. (1968) Proc. Natl. Acad. Sci. U. S. A. 61, 229-236
62. Wong, J. T.-F. (1975) Proc. Natl. Acad. Sci. U. S. A. 72, 1909-1912
63. Wong, J. T.-F. (1988) Microbiol. Sci. 5, 174-181
64. Yamao, F., Inokuchi, H., Cheung, A., Ozeki, H., and Soll, D. (1982) J. Biol. Chem. 257, 11639-11643
65. Yang, D., Oyaizu, Y., Oyaizu, H., Olsen, G. J., and Woese, C. R. (1985) Proc. Natl. Acad, Sci. U. S. A. 82, 4443-4447
66. Yanisch-Perron, C., Vieira, J., and Messing, J. (1985) Gene (Amst.) 33, 103-119
67. Zhao, J., Snyder, W. B., Mühlenhoff, U., Rhiel, E., Warren, P. V., Goldbeck, J. H., and Bryant, D. A. (1993) Mol. Microbiol. 9, 183-194
68. Zubay, G. (1966) in Isolation of Transfer RNA (Cantoni, G. L., and Davies, D. R., eds) Vol. 1, pp. 455-460, Harper & Row, New York