메뉴 건너뛰기




Volumn 178, Issue 22, 1996, Pages 6427-6434

The TACAN4TGCA motif upstream from the -35 region in the σ70-σ(s)- dependent Pm promoter of the TOL plasmid is the minimum DNA segment required for transcription stimulation by XylS regulators

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL PROTEIN; BACTERIAL RNA; BENZOIC ACID DERIVATIVE; DNA BINDING PROTEIN; DNA DIRECTED RNA POLYMERASE; MESSENGER RNA; RNA POLYMERASE SIGMA 70; SIGMA FACTOR; SIGMA FACTOR KATF PROTEIN, BACTERIA; TRANSACTIVATOR PROTEIN; XYLS PROTEIN, PSEUDOMONAS PUTIDA;

EID: 0029658258     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/jb.178.22.6427-6434.1996     Document Type: Article
Times cited : (27)

References (31)
  • 2
    • 0024357841 scopus 로고
    • Determining residue-base interactions between AraC protein and ara1 DNA
    • Brunelle, A., and R. Schleif. 1989. Determining residue-base interactions between AraC protein and ara1 DNA. J. Mol. Biol. 209:606-622.
    • (1989) J. Mol. Biol. , vol.209 , pp. 606-622
    • Brunelle, A.1    Schleif, R.2
  • 3
    • 0026003072 scopus 로고
    • Control site location and transcriptional regulation in Escherichia coli
    • Collado-Vides, J., B. Magasanik, and J. D. Gralla. 1991. Control site location and transcriptional regulation in Escherichia coli. Microbiol. Rev. 55:371-394.
    • (1991) Microbiol. Rev. , vol.55 , pp. 371-394
    • Collado-Vides, J.1    Magasanik, B.2    Gralla, J.D.3
  • 4
    • 0027368853 scopus 로고
    • A regulatory cascade in the induction of rhaBAD
    • Egan, S. M., and R. F. Schleif. 1993. A regulatory cascade in the induction of rhaBAD. J. Mol. Biol. 234:87-98.
    • (1993) J. Mol. Biol. , vol.234 , pp. 87-98
    • Egan, S.M.1    Schleif, R.F.2
  • 5
    • 0005536404 scopus 로고
    • Molecular and functional analysis of TOL plasmid pWWO from Pseudomonas putida and cloning of the entire regulated aromatic ring meta-cleavage pathway
    • Franklin, F. C. H., M. Bagdasarian, M. M. Bagdasarian, and K. N. Timmis. 1981. Molecular and functional analysis of TOL plasmid pWWO from Pseudomonas putida and cloning of the entire regulated aromatic ring meta-cleavage pathway. Proc. Natl. Acad. Sci. USA 78:7458-7462.
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 7458-7462
    • Franklin, F.C.H.1    Bagdasarian, M.2    Bagdasarian, M.M.3    Timmis, K.N.4
  • 6
    • 10344260391 scopus 로고    scopus 로고
    • Ph.D. thesis, University of Granada, Granada, Spain
    • Gallegos, M. T. 1996. Ph.D. thesis, University of Granada, Granada, Spain.
    • (1996)
    • Gallegos, M.T.1
  • 8
    • 0025318026 scopus 로고
    • The meta-cleavage operon of TOL degradative plasmid pWWO comprises 13 genes
    • Harayama, S., and M. Rekik. 1940. The meta-cleavage operon of TOL degradative plasmid pWWO comprises 13 genes. Mol. Gen. Genet. 221:113-120.
    • (1940) Mol. Gen. Genet. , vol.221 , pp. 113-120
    • Harayama, S.1    Rekik, M.2
  • 9
    • 0001823786 scopus 로고
    • Recombinant PCR
    • M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White (ed.), Academic Press, San Diego, Calif
    • Higushi, R. 1990. Recombinant PCR, p. 177-183. In M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White (ed.), PCR protocols: a guide to methods and applications. Academic Press, San Diego, Calif.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 177-183
    • Higushi, R.1
  • 10
    • 0024520745 scopus 로고
    • Site-directed mutagenesis by overlap extension using the polymerase chain reaction
    • Ho, S. N., H. D. Hunt, R. M. Horton, J. K. Pullen, and L. R. Pease. 1989. Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene 77:51-59.
    • (1989) Gene , vol.77 , pp. 51-59
    • Ho, S.N.1    Hunt, H.D.2    Horton, R.M.3    Pullen, J.K.4    Pease, L.R.5
  • 11
    • 0019844981 scopus 로고
    • Molecular cloning of gene xylS of the TOL plasmid: Evidence for positive regulation of the xylDEGF operon by xylS
    • Inouye, S., A. Nakazawa, and T. Nakazawa. 1981. Molecular cloning of gene xylS of the TOL plasmid: evidence for positive regulation of the xylDEGF operon by xylS. J. Bacteriol. 148:413-418.
    • (1981) J. Bacteriol. , vol.148 , pp. 413-418
    • Inouye, S.1    Nakazawa, A.2    Nakazawa, T.3
  • 12
    • 0021198329 scopus 로고
    • Nucleotide sequence of the promoter region of the xylDEGF operon on TOL plasmid of Pseudomonas putida
    • Inouye, S., A. Nakazawa, and T. Nakazawa. 1984. Nucleotide sequence of the promoter region of the xylDEGF operon on TOL plasmid of Pseudomonas putida. Gene 29:323-330.
    • (1984) Gene , vol.29 , pp. 323-330
    • Inouye, S.1    Nakazawa, A.2    Nakazawa, T.3
  • 13
    • 0022502348 scopus 로고
    • Nucleotide sequence of the regulatory gene xylS on the Pseudomonas putida TOL plasmid and identification of the protein product
    • Inouye, S., A. Nakazawa, and T. Nakazawa. 1986. Nucleotide sequence of the regulatory gene xylS on the Pseudomonas putida TOL plasmid and identification of the protein product. Gene 44:235-242.
    • (1986) Gene , vol.44 , pp. 235-242
    • Inouye, S.1    Nakazawa, A.2    Nakazawa, T.3
  • 14
    • 0023393135 scopus 로고
    • Overproduction of the xylS gene product and activation of the xylDLEGF operon on the TOL plasmid
    • Inouye, S., A. Nakazawa, and T. Nakazawa. 1987. Overproduction of the xylS gene product and activation of the xylDLEGF operon on the TOL plasmid. J. Bacteriol. 169:3587-3592.
    • (1987) J. Bacteriol. , vol.169 , pp. 3587-3592
    • Inouye, S.1    Nakazawa, A.2    Nakazawa, T.3
  • 15
    • 0027324747 scopus 로고
    • Identification of a cis-acting sequence within the Pm promoter of the TOL plasmid which confers XylS-mediated responsiveness to substituted benzoates
    • Kessler, B., V. de Lorenzo, and K. N. Timmis. 1993. Identification of a cis-acting sequence within the Pm promoter of the TOL plasmid which confers XylS-mediated responsiveness to substituted benzoates. J. Mol. Biol. 230:699-703.
    • (1993) J. Mol. Biol. , vol.230 , pp. 699-703
    • Kessler, B.1    De Lorenzo, V.2    Timmis, K.N.3
  • 16
    • 0026020230 scopus 로고
    • Identification of a central regulator of stationary-phase gene expression in Escherichia coli
    • Lange, R., and R. Hengge-Aronis. 1991. Identification of a central regulator of stationary-phase gene expression in Escherichia coli. Mol. Microbiol. 5:49-59.
    • (1991) Mol. Microbiol. , vol.5 , pp. 49-59
    • Lange, R.1    Hengge-Aronis, R.2
  • 17
    • 0029174957 scopus 로고
    • Role of sigma-S in transcription stimulation from the positively controlled Pm promoter of the TOL plasmid of Pseudomonas putida
    • Marqués, S., M. T. Gallegos, and J. L. Ramos. 1995 Role of sigma-S in transcription stimulation from the positively controlled Pm promoter of the TOL plasmid of Pseudomonas putida. Mol. Microbiol. 18:851-857.
    • (1995) Mol. Microbiol. , vol.18 , pp. 851-857
    • Marqués, S.1    Gallegos, M.T.2    Ramos, J.L.3
  • 18
    • 0028274784 scopus 로고
    • Transcriptional induction kinetics from the promoters of the catabolic pathways of TOL plasmid pWWO of Pseudomonas putida for metabolism of aromatics
    • Marqués, S., A. Holtel, K. N. Timmis, and J. L. Ramos. 1994. Transcriptional induction kinetics from the promoters of the catabolic pathways of TOL plasmid pWWO of Pseudomonas putida for metabolism of aromatics. J. Bacteriol. 176:2517-2524.
    • (1994) J. Bacteriol. , vol.176 , pp. 2517-2524
    • Marqués, S.1    Holtel, A.2    Timmis, K.N.3    Ramos, J.L.4
  • 19
    • 0027282545 scopus 로고
    • Transcriptional control of the Pseudomonas putida TOL plasmid catabolic pathways
    • Marqués, S., and J. L. Ramos. 1993. Transcriptional control of the Pseudomonas putida TOL plasmid catabolic pathways. Mol. Microbiol. 9:923-929.
    • (1993) Mol. Microbiol. , vol.9 , pp. 923-929
    • Marqués, S.1    Ramos, J.L.2
  • 20
    • 0027367102 scopus 로고
    • Analysis of the m-RNA structure of the Pseudomonas putida TOL meta-fission pathway operon around the transcription initiation point. xylTE and the xylFJ regions
    • Marqués, S., J. L. Ramos, and K. N. Timmis. 1993. Analysis of the m-RNA structure of the Pseudomonas putida TOL meta-fission pathway operon around the transcription initiation point. xylTE and the xylFJ regions. Biochim. Biophys. Acta 1216:227-237.
    • (1993) Biochim. Biophys. Acta , vol.1216 , pp. 227-237
    • Marqués, S.1    Ramos, J.L.2    Timmis, K.N.3
  • 21
    • 0021530830 scopus 로고
    • Transcription of the TOL plasmid toluate catabolic pathway operon of Pseudomonas putida is determined by a pair of coordinately and positively regulated overlapping promoters
    • Mermod, N., P. R. Lehrbach, W. Reineke, and K. N. Timmis. 1984. Transcription of the TOL plasmid toluate catabolic pathway operon of Pseudomonas putida is determined by a pair of coordinately and positively regulated overlapping promoters. EMBO J. 3:2461-2466.
    • (1984) EMBO J. , vol.3 , pp. 2461-2466
    • Mermod, N.1    Lehrbach, P.R.2    Reineke, W.3    Timmis, K.N.4
  • 22
    • 0023190414 scopus 로고
    • XylS gene positive regulator of TOL plasmid pWWO: Identification, sequence analysis, and overproduction leading to constitutive expression of meta-cleavage pathway
    • Mermod, N., J. L. Ramos, A. Bairoch, and K. N. Timmis. 1987. xylS gene positive regulator of TOL plasmid pWWO: identification, sequence analysis, and overproduction leading to constitutive expression of meta-cleavage pathway. Mol. Gen. Genet. 207:349-354.
    • (1987) Mol. Gen. Genet. , vol.207 , pp. 349-354
    • Mermod, N.1    Ramos, J.L.2    Bairoch, A.3    Timmis, K.N.4
  • 23
    • 0026440111 scopus 로고
    • Identification of critical amino-terminal regions of XylS, the positive regulator encoded by the TOL plasmid
    • Michán, C., L. Zhou, M. T. Gallegos, K. N. Timmis, and J. L. Ramos. 1992. Identification of critical amino-terminal regions of XylS, the positive regulator encoded by the TOL plasmid. J. Biol. Chem. 267:22897-22901.
    • (1992) J. Biol. Chem. , vol.267 , pp. 22897-22901
    • Michán, C.1    Zhou, L.2    Gallegos, M.T.3    Timmis, K.N.4    Ramos, J.L.5
  • 24
    • 0023443646 scopus 로고
    • Regulatory circuits controlling transcription of TOL plasmid operon encoding meta-cleavage pathway for degradation of alkylbenzoates by Pseudomonas
    • Ramos, J. L., N. Mermod, and K. N. Timmis. 1987. Regulatory circuits controlling transcription of TOL plasmid operon encoding meta-cleavage pathway for degradation of alkylbenzoates by Pseudomonas. Mol. Microbiol. 1:293-300.
    • (1987) Mol. Microbiol. , vol.1 , pp. 293-300
    • Ramos, J.L.1    Mermod, N.2    Timmis, K.N.3
  • 25
    • 0343419040 scopus 로고
    • Altered effector specificities in regulators of gene expression: TOL plasmid xylS mutants and their use to engineer expansion of the range of aromatics degraded by bacteria
    • Ramos, J. L., A. Stolz, W. Reineke, and K. N. Timmis. 1986. Altered effector specificities in regulators of gene expression: TOL plasmid xylS mutants and their use to engineer expansion of the range of aromatics degraded by bacteria. Proc. Natl. Acad. Sci. USA 83:8467-8471.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 8467-8471
    • Ramos, J.L.1    Stolz, A.2    Reineke, W.3    Timmis, K.N.4
  • 27
    • 0022624526 scopus 로고
    • Genetic, functional and sequence analysis of the xylS and xylR regulators of the TOL plasmid pWWO
    • Spooner, A. R., K. Lindsay, and F. C. H. Franklin. 1986. Genetic, functional and sequence analysis of the xylS and xylR regulators of the TOL plasmid pWWO. J. Gen. Microbiol. 132:1347-1358.
    • (1986) J. Gen. Microbiol. , vol.132 , pp. 1347-1358
    • Spooner, A.R.1    Lindsay, K.2    Franklin, F.C.H.3
  • 28
    • 0023660796 scopus 로고
    • Positive regulation of the Escherichia coli L-rhamnose operon is mediated by products of tandemly repeated regulatory genes
    • Tobin, J. F., and R. F. Schleif. 1987. Positive regulation of the Escherichia coli L-rhamnose operon is mediated by products of tandemly repeated regulatory genes. J. Mol. Biol. 196:789-799.
    • (1987) J. Mol. Biol. , vol.196 , pp. 789-799
    • Tobin, J.F.1    Schleif, R.F.2
  • 29
    • 0023513976 scopus 로고
    • Organisation of the regulatory region of the Escherichia coli melibiose operon
    • Webster, C., K. Kempsell, I. Booth, and S. Busby. 1987. Organisation of the regulatory region of the Escherichia coli melibiose operon. Gene 59:253-263.
    • (1987) Gene , vol.59 , pp. 253-263
    • Webster, C.1    Kempsell, K.2    Booth, I.3    Busby, S.4
  • 30
    • 0016593935 scopus 로고
    • Metabolism of toluene and xylenes by Pseudomonas putida (arvilla) mt-2: Evidence for a new function of the TOL plasmid
    • Worsey, M. J., and P. A. Williams. 1974. Metabolism of toluene and xylenes by Pseudomonas putida (arvilla) mt-2: evidence for a new function of the TOL plasmid. J. Bacteriol. 124:7-13.
    • (1974) J. Bacteriol. , vol.124 , pp. 7-13
    • Worsey, M.J.1    Williams, P.A.2
  • 31
    • 0025371323 scopus 로고
    • Mutations leading to constitutive expression from the TOL plasmid meta-cleavage pathway operon are located at the C-terminal end of the positive regulator XylS protein
    • Zhou, L., K. N. Timmis, and J. L. Ramos. 1990. Mutations leading to constitutive expression from the TOL plasmid meta-cleavage pathway operon are located at the C-terminal end of the positive regulator XylS protein. J. Bacteriol. 172:3707-3710.
    • (1990) J. Bacteriol. , vol.172 , pp. 3707-3710
    • Zhou, L.1    Timmis, K.N.2    Ramos, J.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.