Improved large-scale preparation of phage T4 endonuclease VII overexpressed in E. coli

DNA Research

Volumn 2, Issue 6, 1995, Pages 277-284

  Golz, Stefan ^a   Birkenbihl, Rainer P ^a   Kemper, Börries ^a  

^a UNIVERSITY OF COLOGNE   (Germany)

Author keywords

DNA binding protein; Enzymatic mismatch cleavage (EMC); Mutation mapping; Protein purification; T4 endonuclease VII

Indexed keywords

ESCHERICHIA COLI;

DEOXYRIBONUCLEASE; DNA; ENDODEOXYRIBONUCLEASE VII; HYBRID PROTEIN; ISOPROPYL THIOGALACTOSIDE; VIRUS PROTEIN;

ARTICLE; BACTERIOPHAGE T4; BACTERIOPHAGE T7; BIOSYNTHESIS; ENZYME INDUCTION; ENZYME SPECIFICITY; ENZYMOLOGY; ESCHERICHIA COLI; GENE VECTOR; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; VIRUS GENE;

BACTERIOPHAGE T4; BACTERIOPHAGE T7; BASE SEQUENCE; CLONING, MOLECULAR; DNA; ENDODEOXYRIBONUCLEASES; ENZYME INDUCTION; ESCHERICHIA COLI; GENES, VIRAL; GENETIC VECTORS; ISOPROPYL THIOGALACTOSIDE; MOLECULAR SEQUENCE DATA; RECOMBINANT FUSION PROTEINS; SUBSTRATE SPECIFICITY; VIRAL STRUCTURAL PROTEINS;

EID: 0029655223     PISSN: 13402838     EISSN: None     Source Type: Journal    
DOI: 10.1093/dnares/2.6.277     Document Type: Article

References (36)

1. Frankel, F. R., Batcheler, M. L., and Clark, C. F. 1971, The role of the gene 49 in DNA replication and head morphogenesis in bacteriophage T4, J. Mol. Biol., 62, 439-463.
2. Fujisawa, H. and Minagawa, T. 1971, Genetic control of the DNA maturation in the process of phage morphogenesis, Virology, 45, 289-291.
3. Kemper, B. and Brown, D. T. 1976, Function of gene 49 of bacteriophage T4. II. Analysis of intracellular development and the structure of very fast-sedimenting DNA, J. Virol., 18, 1000-1015.
4. Kemper, B. and Janz, E. 1976, Function of gene 49 of bacteriophage T4. I. Isolation and biochemical characterization of very fast-sedimenting DNA, J. Virol., 18, 992-999.
5. Minagawa, T. and Ryo, Y. 1978, Substrate specificity of gene 49-controlled deoxyribonuclease of bacteriophage T4: special reference to DNA packaging, Virology, 91, 222-233.
6. Minagawa, T. and Ryo, Y. 1979, Genetic control of formation of very fast sedimenting DNA of bacteriophage T4, Mol Gen. Genet., 170, 113.
7. Kemper, B., Garabett, M., and Courage, U. 1981, Studies on T4-head maturation. 2. Substrate specificity of gene-49-controlled endonuclease, Eur. J. Biochem., 115, 133-141.
8. Kemper, B. and Garabett, M. 1981, Studies on T4-head maturation. 1. Purification and characterization of gene-49-controlled endonuclease, Eur. J. Biochem., 115, 123-131.
9. Miyazaki, J., Ryo, Y., and Minagawa, T. 1983, Involvement of gene 49 in recombination of bacteriophage T4, Genetics, 104, 1-9.
10. Mosig, G., Shaw, M., and Garcia, G. M. 1984, On the role of DNA replication, endonuclease VII, and rII proteins in processing of recombinational intermediates in phage T4, Cold Spring Habor Symp. Quant. Biol., 49, 371-382.
11. Mosig, G. 1987, The essential role of recombination in phage T4 growth, Annu. Rev. Genet., 21, 347-371.
12. Grebenshchikova, S. M., Plugina, L. A., Shcherbakov, V. P. 1994, The role of T4-bacteriophage endonuclease-VII in correction of mismatched regions, Genetika, 30, 622-626.
13. Kemper, B., Jensch, F., von Depka-Prondzynski, M., Fritz, H. J., Borgmeyer, U. M., and Mizuuchi K. 1984, Resolution of Holliday structures by endonuclease VII as observed in interactions with cruciform DNA, Cold Spring Habor Symp. Quant. Biol., 49, 815-825.
14. Mizuuchi, K., Kemper, B., Hays, J., Weisberg, R. A. 1982, T4 endonuclease VII cleaves Holliday structures, Cell, 29, 357-365.
15. Duckett, D, Murchie, A. I. H., Diekmann, S., v. Kitzing, E., Kemper, B., and Lilley, D. M. J. 1988, The structure of the Holliday junction and its resolution, Cell, 55, 79-89.
16. Bhattacharyya, A., Murchie, A. I. H., v. Kitzing, E., Diekmann, S., Kemper, B, and Lilley, D. M. J. 1991, Model for the interaction of DNA junctions and resolving enzymes, J. Mol. Biol., 221, 1191-1207.
17. Lilley, D. M. J, Kemper, B. 1984, Cruciform-resolvase interactions in supercoiled DNA, Cell, 36, 413-422.
18. Jensch, F. and Kemper, B. 1986, Endonuclease VII resolves Y-junctions in branched DNA in vitro, EMBO J., 5, 181-189.
19. Kemper, B., Pottmeyer, S., Solaro, P. et al. 1990, Structure & Methods Vol. 1, Human Genome Initiative & DNA Recombination, Sarma RH, Sarma MH (eds) Adenine Press, Schenectady, N.Y.
20. Pottmeyer, S. and Kemper, B. 1992, T4 endonuclease VII resolves cruciform DNA with nick and counter-nick and its activity is directed by local nucleotide sequence, J. Mol. Biol., 223, 607-615.
21. Kleff, S. and Kemper, B. 1988, Initiation of heteroduplexloop repair by T4-encoded endonuclease VII in vitro, EMBO J., 7, 1527-1535.
22. Solaro, P. C, Birkenkamp, K., Pfeiffer, P., and Kemper, B. 1993, Endonuclease VII of phage T4 triggers mismatch correction in vitro, J. Mol. Biol., 230, 868-877.
23. Birkenkamp, K. and Kemper, B. 1995, In vitro processing of heteroduplex loops and mismatches by endonuclease VII, DNA Res., 2, 9-14.
24. Shcherbakov, V. P., Plugina, L. A., and Kudryashova, E. A. 1995, Marker-dependent recombination in T4 bacteriophage. 4. Recombinational effects of antimutator T4. DNA polymerase, Genetics, 140, 13-25.
25. Bertrand-Burggraf, E., Kemper, B., and Fuchs, R. P. P. 1994, Endonuclease VII of phage T4 nicks N-2 acetylaminofluorene induced DNA structures in vitro, Mutations Research, 13, 484-489.
26. Murchie, A. I. H. and Lilley, D. M. J. 1993, T4 endonuclease VII cleaves DNA containing a cisplatin adduct, J. Mol. Biol., 233, 77-85.
27. Youil, R., Kemper, B. W., Cotton, R. G. 1995, Screening for mutations by enzyme mismatch cleavage with T4 endonuclease VII, Proc. Natl. Acad. Sci. USA, 92, 87-91.
28. Kosak, H. G. and Kemper, B. 1990, Large-scale preparation of T4 endonuclease VII from over-expressing bacteria, Eur. J. Biochem., 194, 779-784.
29. Studier, W. F., Rosenberg, A. H., Dunn, J. J. et al. 1991, Methods in Enzymology Vol. 185, Goeddel DV (eds) Academic Press, Inc., San Diego.
30. Jensch, F., Kosak, H., Seeman, N. C., and Kemper, B. 1989, Cruciform cutting endonucleases from Saccharomyces cerevisiae and phage T4 show conserved reactions with branched DNAs, EMBO J., 8, 4325-4334.
31. Mueller, J. E., Newton, C. J., Jensch, F. et al. 1990, Resolution of Holliday Junction Analogs by T4 Endonuclease VII can be directed by substrate structure, J. Biol. Chem., 265, 13918-13924.
32. Laemmli, U. K. 1970, Cleavage of structural proteins during the assembly of the head of bacteriophage T4, Nature, 227, 680-685.
33. Maniatis, T, Fritsch, E. F, and Sambrook, J. 1982, Molecular Cloning. A laboratory manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York.
34. Wilson, G. G., Young, K. K. Y., Edlin, G. J., and Konigsberg, W. 1979, High-frequency generalized transduction by bacteriophage T4, Nature, 280, 80-81.
35. Mosig, G., Luder, A., Ernst, A., and Canan, N. 1991, Bypass of a primase requirement for bacteriophage T4 DNA replication in vivo by a recombination enzyme, endonuclease VII, The New Biologist., 3, 1195-1205.
36. Barth, K. A., Powell, D., Trupin, M., and Mosig, G. 1988, Regulation of two nested proteins from gene 49 (recombination endonuclease VII) and of a lambda rexA-like protein of bacteriophage T4, Genetics, 120, 329-343.