Frequency Spectrum of NH Bonds in Eglin c from Spectral Density Mapping at Multiple Fields

Biochemistry

Volumn 34, Issue 51, 1995, Pages 16733-16752

  Peng, Jeffrey W ^a   Wagner, Gerhard ^b  

^a VERTEX PHARMACEUTICALS   (United States)

^b HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NITROGEN 15; PROTON;

ARTICLE; DEUTERON NUCLEAR MAGNETIC RESONANCE; ELECTRON SPIN RESONANCE; MOLECULAR DYNAMICS; MOLECULAR MODEL; NUCLEAR MAGNETIC RESONANCE; PRIORITY JOURNAL; PROTEIN STRUCTURE; PROTON NUCLEAR MAGNETIC RESONANCE; SPECTROMETRY;

AMINO ACID SEQUENCE; HYDROGEN; MAGNETIC RESONANCE SPECTROSCOPY; MOLECULAR SEQUENCE DATA; MOLECULAR STRUCTURE; NITROGEN; PROTEINS; SERPINS;

EID: 0029623152     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi00051a023     Document Type: Article

References (73)

1. Abragam, A. (1961) The Principles of Nuclear Magnetism, Clarendon Press, Oxford, England.
2. Akke, M., Skelton, H. J., Kordel, J., Palmer, A. G., III, & Chazin, W. J. (1993) Biochemistry 32, 9832.
3. Allerhand, A., Doddrell, D., Glushko, V., Cochran, D. W., Wenkert, E., Lawson, P. J., & Gurd, F. R. N. (1971) J. Am. Chem. Soc. 93, 544-546.
4. Barbato, G., Ikura, M., Kay, L. E., Pastor, R. W., & Bax, A. (1992) Biochemistry 31, 5269-5278.
5. Bax, A., & Davis, D. (1985) J. Magn. Reson. 65, 355-360.
6. Bax, A., Ikura, M., Kay, L. E., Torchia, D. A., & Tschudin, R. (1990) J. Magn. Reson. 86, 304-318.
7. Bodenhausen, G., & Ruben, D. (1980) Chem. Phys. Lett. 69, 185.
8. Boyd, J., Hommel, U., & Campbell, I. D. (1990) Chem. Phys. Lett. 175, 477-482.
9. Braunschweiler, L., & Ernst, R. R. (1983) J. Magn. Reson. 53, 521-528.
10. Cheng, J.-W., Lepre, C. A., Chambers, S. P., Fulghum, J. R., & Moore, J. M. (1993) Biochemistry 32, 9000.
11. Cheng, J.-W., Lepre, C. A., & Moore, J. M. (1994) Biochemistry 33, 4093.
12. Clore, G. M., Szabo, A., Bax, A., Kay, L. E., Driscoll, P. C., & Gronenbom, A. M. (1990a) J. Am. Chem. Soc. 112, 4989-4991.
13. Clore, G. M., Driscoll, P. C., Wingfield, P. T., & Gronenbom, A. M. (1990b) Biochemistry 29, 7387-7401.
14. Dalvit, C. (1991) J. Magn. Reson. 95, 410-416.
15. Dalvit, C., & Bodenhausen, G. (1989) Chem. Phys. Lett. 161, 554.
16. Davis, D. G., Perlman, M. E., & London, R. E. (1994) J. Magn. Reson. B104, 266-275.
17. Dayie, K. T., & Wagner, G. (1994) J. Magn. Reson. 111A, 121-126.
18. Deverell, C., Morgan, R. E., & Strange, J. H. (1970) Mol. Phys. 18, 553-559.
19. Ernst, R. R., Bodenhausen, G., & Wokaun, A. (1987) Principles of Nuclear Magnetic Resonance in One and Two Dimensions, Oxford University Press, Oxford, England.
20. Farrow, N. A., Zhang, O., Forman-Kay, J. D., & Kay, L. E. (1995) Biochemistry 34, 868-878.
21. Fejzo, J., Westler, W. M., Macura, S., & Markley, J. L. (1991) J. Magn. Reson. 92, 20.
22. Gerald, R., II, Bernhard, T., Haeberlen, U., Rendell, J., & Opella, S. (1993) J. Am. Chem. Soc. 115, 777-782.
23. Goldman, M. (1988) Quantum Description of High-Resolution NMR in Liquids, Clarendon Press, Oxford, England.
24. Habazettl, J., & Wagner, G. (1995) J. Magn. Reson. B109, 100-104.
25. Heinz, D. W., Hyberts, S. G., Peng, J. W., Priestle, J. P., Wagner, G., & Grutter, M. G. (1992) Biochemistry 31, 8755-8766.
26. Hipler, K., Priestle, J. P., Rahuel, J., & Grutter, M. G. (1992) FEBS Lett. 309, 139-145.
27. Hiyama, Y., Niu, C., Silverton, J. V., Bavaso, A., & Torchia, D. A. (1988) J. Am. Chem. Soc. 110, 2378-2383.
28. Hyberts, S. G., & Wagner, G. (1990) Biochemistry 29, 1465-1474.
29. Hyberts, S. G., Goldberg, M. S., Havel, T. F., & Wagner, G. (1992) Protein Sci. 1, 736-751.
30. Jardetzky, O., & Roberts, G. C. K. (1981) NMR in Molecular Biology, Academic Press, New York.
31. Kay, L. E., Torchia, D. A., & Bax, A. (1989) Biochemistry 28, 8972-8979.
32. Kay, L. E., Nicholson, L. K., Delaglio, F., Bax, A., & Torchia, D. A. (1992) J. Magn. Reson. 97, 359.
33. Keiter, E. A. (1986) Ph.D. Thesis, University of Illinois.
34. Kelsh, L. P., Ellena, J. F., & Cafiso, D. S. (1992) Biochemistry 31, 5136-5144.
35. King, R., & Jardetzky, O. (1978) J. Chem. Phys. Lett. 55, 15-18.
36. Kinoshita, K., Kawato, W., Jr., & Ikegami, A. (1977) Biophys. J. 20, 289
37. Kordel, J., Skelton, N. J., Akke, M., Palmer, A. G., & Chazin, W. J. (1992) Biochemistry 31, 4856-4866.
38. Lefevre, J.-F., Dayie, K. T., Peng, J. W., & Wagner, G. (1996) Biochemistry (submitted for publication).
39. Li, Y. C., & Montelione, G. T. (1994) J. Magn. Reson. 105B, 45-51.
40. Lipari, G., & Szabo, A. (1982a) J. Am. Chem. Soc. 104, 4546-4559.
41. Lipari, G., & Szabo, A. (1982b) J. Am. Chem. Soc. 104, 4559-4570.
42. Marion, D., & Wiithrich, K. (1983) Biochem. Biophys. Res. Commun. 113, 967-974.
43. Marki, W., Rink, H., Schnebli, H. P., Liersch, M., Raschdorf, F., & Richter, W. (1985) in Peptides: Structure and Function, Proceedings of the 9th American Peptide Symposium (Deber, C. M., Hruby, V. J., & Kopple, K. D., Eds.) pp 385-388, Pierce Chemical Co., Rockford, IL.
44. Marquardt, D. W. (1963) J. Soc. Ind. Appl. Math. 11, 431-441.
45. McPhalen, C. A., & James, M. N. G. (1987) Biochemistry 26, 261-269.
46. McPhalen, C. A., & James, M. N. G. (1988) Biochemistry 27, 6582-6598.
47. McPhalen, C. A., Schnebli, H. P., & James, M. N. G. (1985) FEBS Lett. 188, 55-58.
48. Neuhaus, D., & van Mierlo, C. P. M. (1992) J. Magn. Reson. 100, 221.
49. Nicholson, L. K., Yamazaki, T., Torchia, D. A., Grzesiek, S., Bax, A., Stahl, S. J., Kaufman, J. D., Wingfield, P. T., Lam, P. Y. S., Jadhav, P. K., Hodge, C. N., Domaille, P. J., & Chang, C. H. (1995) Nat. Struct. Biol. 2, 274-280.
50. Nirmala, N. R., & Wagner, G. (1988) J. Am. Chem. Soc. 110, 7557-7558.
51. Nirmala, N. R., & Wagner, G. (1989) J. Magn. Reson. 82, 659-661.
52. Palmer, A. G., III, Skelton, N. J., Chazin, W. J., Wright, P. E., & Ranee, M. (1991) Mol. Phys. 75, 699-711.
53. Peng, J. W., & Wagner, G. (1992a) J. Magn. Reson. 98, 308.
54. Peng, J. W., & Wagner, G. (1992b) Biochemistry 31, 8571-8586.
55. Peng, J. W., & Wagner, G. (1994a) Methods Enzymol. 239, 563-596.
56. Peng, J. W., & Wagner, G. (1994b) in Nuclear Magnetic Resonance Probes of Molecular Dynamics (Tycko, R., Ed.) pp 373-454, Kluwer Academic Publishers Dordrecht, The Netherlands.
57. Peng, J. W., Thanabal, V., & Wagner, G. (1991a) J. Magn. Reson. 94, 82-100.
58. Peng, J. W., Thanabal, V., & Wagner, G. (1991b) J. Magn. Reson. 95, 421-427.
59. Powers, R., Clore, G. M., Stahl, S. J., Wingfield, P. T., & Gronenbom, A. M. (1992) Biochemistry 31, 9150.
60. Press, W. H., Flannery, B. P., Teukolsky, S. A., & Vetterling, W. T. (1988) Numerical Recipes in C-The Art of Scientific Computing, Cambridge University Press, New York.
61. Redfield, A. G. (1957) IBM J., 19-31.
62. Redfield, C., Boyd, J., Smith, L. J., Smith, A. R. G., & Dobson, C. M. (1992) Biochemistry 31, 10431.
63. Richarz, R., Nagayama, K., & Wiithrich, K. (1980) Biochemistry 19, 5189-5196.
64. Schleich, T., Morgan, C. F., & Caines, G. H. (1989) Methods Enzymol. 176A, 386-418.
65. Schneider, D. M., Dellwo, M. J., & Wand, A. J. (1992) Biochemistry 31, 3645-3652.
66. Shaka, A. J., Barker, P. B., & Freeman, R. (1985) J. Magn. Reson. 64, 547-552.
67. Slichter, C. P. (1978) Principles of Magnetic Resonance, Springer-Verlag, New York.
68. Stone, M. J., Chandrasekhar, K., Holmgren, A., Wright, P. E., & Dyson, H. J. (1993) Biochemistry 32, 426-435.
69. Szyperski, T., Luginbiihl, P., Otting, G., Guntert, P., & Wiithrich, K. (1993) J. Biol. NMR 3, 151.
70. Wagner, G. (1994) Approaches for Studies of Protein Mobility and Structure, The 35th Experimental Nuclear Magnetic Resonance Conference, April 10-15, 1994, Asilolmar, CA.
71. Wennerstrom, H. (1972) Mol. Phys. 24, 69-80.
72. Wittebort, R. J., & Szabo, A. (1978) J. Chem. Phys. 69, 1723-1736.
73. Woessner, D. E. (1962) J. Chem. Phys. 36, 647-654.