메뉴 건너뛰기




Volumn 177, Issue 4, 1995, Pages 325-340

A microscale model of bacterial swimming, chemotaxis and substrate transport

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIUM; CELL MOTILITY; CHEMOTAXIS; COMPUTER MODEL; DIFFUSION; ENZYME SUBSTRATE; MATHEMATICAL MODEL; MEMBRANE TRANSPORT; NONHUMAN; PRIORITY JOURNAL; SWIMMING;

EID: 0029590791     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1006/jtbi.1995.0251     Document Type: Article
Times cited : (78)

References (48)
  • 1
    • 0019188958 scopus 로고
    • Biased random walk models for chemotaxis and related diffusion approximations
    • Alt, W. (1980). Biased random walk models for chemotaxis and related diffusion approximations. J. Math. Biol. 9, 147-177.
    • (1980) J. Math. Biol , vol.9 , pp. 147-177
    • Alt, W.1
  • 2
    • 0024785025 scopus 로고
    • An evaluation of mathematical models of the transport of biologically reaction solutes in saturated soils and aquifers
    • Baveye, P. & Valocchi, A. (1989). An evaluation of mathematical models of the transport of biologically reaction solutes in saturated soils and aquifers. Water Resour. Res. 25, 1413-1421.
    • (1989) Water Resour. Res , vol.25 , pp. 1413-1421
    • Baveye, P.1    Valocchi, A.2
  • 3
    • 0016540639 scopus 로고
    • How bacteria swim
    • Berg, H. C. (1975). How bacteria swim. Sci. Am. 233, 36-44.
    • (1975) Sci. Am , vol.233 , pp. 36-44
    • Berg, H.C.1
  • 4
    • 0004232671 scopus 로고
    • Expanded edn. Princeton: Princeton University Press
    • Berg, H. C. (1993). Random Walks in Biology. Expanded edn. Princeton: Princeton University Press.
    • (1993) Random Walks in Biology
    • Berg, H.C.1
  • 5
    • 0015526205 scopus 로고
    • Chemotaxis in E. Coli analyzed by three-dimensional tracking
    • Berg, H. C. & Brown, D. A. (1972). Chemotaxis in E. coli analyzed by three-dimensional tracking. Nature 239, 500-504.
    • (1972) Nature , vol.239 , pp. 500-504
    • Berg, H.C.1    Brown, D.A.2
  • 6
    • 0024991378 scopus 로고
    • Chemotaxis of bacteria in glass capillary arrays
    • Berg, H. C. & Turner, L. (1990). Chemotaxis of bacteria in glass capillary arrays. Biophys. J. 58, 919-930.
    • (1990) Biophys. J , vol.58 , pp. 919-930
    • Berg, H.C.1    Turner, L.2
  • 7
    • 0000432710 scopus 로고
    • Temporal stimulation of chemotaxis in E. Coli
    • Brown, D. A. & Berg, H. C. (1974). Temporal stimulation of chemotaxis in E. coli. Proc. Natl. Acad. Sci. U.S.A. 71, 1388-1392.
    • (1974) Proc. Natl. Acad. Sci. U.S.A , vol.71 , pp. 1388-1392
    • Brown, D.A.1    Berg, H.C.2
  • 8
    • 0027515660 scopus 로고
    • Effects of motility and adsorption rate coefficient on transport of bacteria through saturated porous media
    • Camper, A. K., Hayes, J. T., Sturman, P. J., Jones, W. L. & Cunningham, A. B. (1993). Effects of motility and adsorption rate coefficient on transport of bacteria through saturated porous media. Appl. Environ. Microbiol. 59, 3455-3462.
    • (1993) Appl. Environ. Microbiol , vol.59 , pp. 3455-3462
    • Camper, A.K.1    Hayes, J.T.2    Sturman, P.J.3    Jones, W.L.4    Cunningham, A.B.5
  • 10
    • 84968510911 scopus 로고
    • Numerical solution of the Navier-Stokes equations
    • Chorin, A. J. (1968). Numerical solution of the Navier-Stokes equations. Math. Comput. 22, 745-762.
    • (1968) Math. Comput , vol.22 , pp. 745-762
    • Chorin, A.J.1
  • 11
    • 0022252804 scopus 로고
    • Microbial transport in soils and groundwater: A numerical model. Adv
    • Corapcioglu, M. Y. & Haridas, A. (1985). Microbial transport in soils and groundwater: a numerical model. Adv. Water Resources 8, 188-200.
    • (1985) Water Resources , vol.8 , pp. 188-200
    • Corapcioglu, M.Y.1    Haridas, A.2
  • 13
    • 84990553365 scopus 로고
    • Truncated Newton methods and the modeling of complex immersed elastic structures
    • Fauci, L. J. & Fogelson, A. L. (1993). Truncated Newton methods and the modeling of complex immersed elastic structures. Comm. Pure and Appl. Math. 46, 787-818.
    • (1993) Comm. Pure and Appl. Math , vol.46 , pp. 787-818
    • Fauci, L.J.1    Fogelson, A.L.2
  • 14
    • 0002265666 scopus 로고
    • A computational model of aquatic animal locomotion
    • Fauci, L. J. & Peskin, C. S. (1988). A computational model of aquatic animal locomotion. J. Comp. Phys. 77, 85-108.
    • (1988) J. Comp. Phys , vol.77 , pp. 85-108
    • Fauci, L.J.1    Peskin, C.S.2
  • 15
    • 0001021844 scopus 로고
    • A mathematical model and numerical method for studying platelet adhesion and aggregation during blood clotting
    • Fogelson, A. L. (1984). A mathematical model and numerical method for studying platelet adhesion and aggregation during blood clotting. J. Comp. Phys. 56, 111-134.
    • (1984) J. Comp. Phys , vol.56 , pp. 111-134
    • Fogelson, A.L.1
  • 16
    • 0343997830 scopus 로고
    • Mathematical modeling and quantitative characterization of bacterial motility and chemotaxis
    • Hurst C. J., ed.), New York: Wiley
    • Ford, R. M. (1992). Mathematical modeling and quantitative characterization of bacterial motility and chemotaxis. In: Modeling the Metabolic and Physiology Activities ofMicroorgan-isms. (Hurst C. J., ed.) pp. 177-215. New York: Wiley.
    • (1992) Modeling the Metabolic and Physiology Activities Ofmicroorgan-Isms , pp. 177-215
    • Ford, R.M.1
  • 17
    • 0026932947 scopus 로고
    • On the relationship between cell balance equations for chemotactic cell populations
    • Ford, R. M. & Cummings P. (1992). On the relationship between cell balance equations for chemotactic cell populations. SIAM J. Appl. Math 52, 1426-1441.
    • (1992) SIAM J. Appl. Math , vol.52 , pp. 1426-1441
    • Ford, R.M.1    Cummings, P.2
  • 18
    • 0026131334 scopus 로고
    • Measurement of bacterial random motility and chemotaxis coefficients: I. Stopped-flow diffusion chamber assay
    • Ford, R. M., Phillips, B. R., Quinn, J. A. & Lauffenburger, D. A. (1991). Measurement of bacterial random motility and chemotaxis coefficients: I. Stopped-flow diffusion chamber assay. Biotechnol. Bioeng. 37, 647-660.
    • (1991) Biotechnol. Bioeng , vol.37 , pp. 647-660
    • Ford, R.M.1    Phillips, B.R.2    Quinn, J.A.3    Lauffenburger, D.A.4
  • 19
    • 0027539620 scopus 로고
    • Cellular dynamics simulations of bacterial chemotaxis
    • Frymier, P. D., Ford, R. M. & Cummings, P. T. (1993). Cellular dynamics simulations of bacterial chemotaxis. Chem. Eng. Sci. 48, 687-699.
    • (1993) Chem. Eng. Sci , vol.48 , pp. 687-699
    • Frymier, P.D.1    Ford, R.M.2    Cummings, P.T.3
  • 20
    • 0028406445 scopus 로고
    • Analysis of bacterial migration: I. Numerical solution of balance equation
    • Frymier, P. D., Ford, R. M. & Cummings, P. T. (1994). Analysis of bacterial migration: I. Numerical solution of balance equation. AICHE Journal 40, 704-715.
    • (1994) AICHE Journal , vol.40 , pp. 704-715
    • Frymier, P.D.1    Ford, R.M.2    Cummings, P.T.3
  • 21
    • 0001931058 scopus 로고
    • Microbial pollutants: Their survival and transport pattern to ground water
    • Bitton G. & Gerba C. P., New York: Wiley
    • Gerba, C. P. & Bitton, G. (1984). Microbial pollutants: Their survival and transport pattern to ground water. In: Groundwater Pollution Microbiology (Bitton G. & Gerba C. P., eds) pp. 68-85. New York: Wiley.
    • (1984) Groundwater Pollution Microbiology , pp. 68-85
    • Gerba, C.P.1    Bitton, G.2
  • 22
    • 0039361769 scopus 로고
    • Hydrodynamic forces and band formation in swimming magnetotactic bacteria
    • Guell, D. C., Brenner, H., Frankel, R. B. & Hartman, H. (1988). Hydrodynamic forces and band formation in swimming magnetotactic bacteria. J. theor. Biol. 135, 525-42.
    • (1988) J. Theor. Biol , vol.135 , pp. 525-542
    • Guell, D.C.1    Brenner, H.2    Frankel, R.B.3    Hartman, H.4
  • 25
    • 0018515511 scopus 로고
    • The hydrodynamics of flagellar propulsion: Helical waves
    • Higdon, J. J. L. (1979). The hydrodynamics of flagellar propulsion: Helical waves. J. Fluid Mech. 94, 331-351.
    • (1979) J. Fluid Mech , vol.94 , pp. 331-351
    • Higdon, J.J.L.1
  • 26
    • 0029257461 scopus 로고
    • The development of concentration gradients in a suspension of chemotactic bacteria
    • Hillesdon, A. J., Pedley, T. J. & Kessler, J. O. (1995). The development of concentration gradients in a suspension of chemotactic bacteria. Bull. math. Biol. 57, 299-344.
    • (1995) Bull. Math. Biol , vol.57 , pp. 299-344
    • Hillesdon, A.J.1    Pedley, T.J.2    Kessler, J.O.3
  • 27
    • 0001264289 scopus 로고
    • Bacterial transport in porous media: Evaluation of model using laboratory observations
    • Hornberger, G. M., Mills, A. L. & Herman, J. S. (1992). Bacterial transport in porous media: evaluation of model using laboratory observations. Water Resources Research 28, 915-938.
    • (1992) Water Resources Research , vol.28 , pp. 915-938
    • Hornberger, G.M.1    Mills, A.L.2    Herman, J.S.3
  • 28
    • 0013581263 scopus 로고
    • Survival, detection and containment of bacteria
    • Jackman, S. C., Lee, H. & Trevors, J. T. (1992). Survival, detection and containment of bacteria. Microb. Releases 1, 125-154.
    • (1992) Microb. Releases , vol.1 , pp. 125-154
    • Jackman, S.C.1    Lee, H.2    Trevors, J.T.3
  • 29
    • 0021798652 scopus 로고
    • Microbial penetration through nutrient-saturated Berea sandstone
    • Jenneman, G. E., McInerney, M. J. & Knapp, R. M. (1985). Microbial penetration through nutrient-saturated Berea sandstone. Appl. Environ. Microbiol. 50, 383-391.
    • (1985) Appl. Environ. Microbiol , vol.50 , pp. 383-391
    • Jenneman, G.E.1    McInerney, M.J.2    Knapp, R.M.3
  • 30
    • 0015010990 scopus 로고
    • Traveling bands of chemotactic bacteria: A theoretical analysis
    • Keller, E. F. & Segel, L. A. (1971). Traveling bands of chemotactic bacteria: a theoretical analysis. J. theor. Biol. 30, 235-248.
    • (1971) J. Theor. Biol , vol.30 , pp. 235-248
    • Keller, E.F.1    Segel, L.A.2
  • 32
    • 51249174778 scopus 로고
    • Quantitative studies of bacterial chemotaxis and microbial population dynamics
    • Lauffenburger, D. A. (1991). Quantitative studies of bacterial chemotaxis and microbial population dynamics. Microb. Ecol. 22, 175-185.
    • (1991) Microb. Ecol , vol.22 , pp. 175-185
    • Lauffenburger, D.A.1
  • 33
    • 0000279210 scopus 로고
    • Flagellar hydrodynamics
    • Lighthill, J. (1976). Flagellar hydrodynamics. SIAM Review 18, 161-230.
    • (1976) SIAM Review , vol.18 , pp. 161-230
    • Lighthill, J.1
  • 34
    • 0028838469 scopus 로고
    • Unidirectional motility of Eschericia coli in restrictive capillaries
    • Liu, Z. & Papadopoulos, K. D. (1995). Unidirectional motility of Eschericia coli in restrictive capillaries. Appl. Environ. Microbiol. 61, 3567-3572.
    • (1995) Appl. Environ. Microbiol , vol.61 , pp. 3567-3572
    • Liu, Z.1    Papadopoulos, K.D.2
  • 35
    • 0015397646 scopus 로고
    • The gradient sensing mechanism in bacterial chemotaxis
    • MacNab, R. M. & Koshland, D. E. (1972). The gradient sensing mechanism in bacterial chemotaxis. Proc. Natn. Acad. Sci. U.S.A. 69, 2509-2512.
    • (1972) Proc. Natn. Acad. Sci. U.S.A , vol.69 , pp. 2509-2512
    • Macnab, R.M.1    Koshland, D.E.2
  • 37
    • 0023746235 scopus 로고
    • Models of dispersal in biological systems
    • Othmer, H. G., Dunbar, S. R. & Alt, W. (1988). Models of dispersal in biological systems. J. Math. Biol. 26, 263-298.
    • (1988) J. Math. Biol , vol.26 , pp. 263-298
    • Othmer, H.G.1    Dunbar, S.R.2    Alt, W.3
  • 38
    • 0000304274 scopus 로고
    • Hydrodynamic phenomena in suspensions of swimming microorganisms
    • Pedley, T. J. & Kessler, J. O. (1992). Hydrodynamic phenomena in suspensions of swimming microorganisms. Annu. Rev. Fluid Mech. 24, 313-58.
    • (1992) Annu. Rev. Fluid Mech , vol.24 , pp. 313-358
    • Pedley, T.J.1    Kessler, J.O.2
  • 39
    • 45149145362 scopus 로고
    • A three-dimensional computational model for blood flow in the heart II
    • Peskin, C. C. & McQueen, D. M. (1989a). A three-dimensional computational model for blood flow in the heart II. J. Comp. Phys. 82, 289-297.
    • (1989) J. Comp. Phys , vol.82 , pp. 289-297
    • Peskin, C.C.1    McQueen, D.M.2
  • 40
    • 0017424014 scopus 로고
    • Numerical analysis of blood flow in the heart
    • Peskin, C. S. (1977). Numerical analysis of blood flow in the heart. J. Comp. Phys. 25, 220-252.
    • (1977) J. Comp. Phys , vol.25 , pp. 220-252
    • Peskin, C.S.1
  • 41
    • 45149143078 scopus 로고
    • A three-dimensional computational model for blood flow in the heart I
    • Peskin, C. S. & McQueen, D. M. (1989b). A three-dimensional computational model for blood flow in the heart I. J. Comp. Phys. 81, 372-405.
    • (1989) J. Comp. Phys , vol.81 , pp. 372-405
    • Peskin, C.S.1    McQueen, D.M.2
  • 42
    • 84890506631 scopus 로고
    • Life at low Reynolds number
    • Purcell, E. M. (1977). Life at low Reynolds number. Am. J. Physics 45, 3-11.
    • (1977) Am. J. Physics , vol.45 , pp. 3-11
    • Purcell, E.M.1
  • 43
    • 0027163350 scopus 로고
    • The role of hydrodynamic interaction in the locomotion of microorganisms
    • Ramia, M., Tullock, D. L. & Phan-Thien, N. (1993). The role of hydrodynamic interaction in the locomotion of microorganisms. Biophys. J. 65, 755-778.
    • (1993) Biophys. J , vol.65 , pp. 755-778
    • Ramia, M.1    Tullock, D.L.2    Phan-Thien, N.3
  • 44
    • 0024730887 scopus 로고
    • Mechanisms of microbial movement in subsurface materials
    • Reynolds, P. J., Chang, Y. I. & Yen, T. F. (1989). Mechanisms of microbial movement in subsurface materials. Appl. Environ. Microbiol. 55, 2280-2286.
    • (1989) Appl. Environ. Microbiol , vol.55 , pp. 2280-2286
    • Reynolds, P.J.1    Chang, Y.I.2    Yen, T.F.3
  • 45
    • 0024940626 scopus 로고
    • Transport models for chemotactic cell populations based on individual cell behavior
    • Rivero, M. A., Tranquillo, R. T., Buettner, H. M. & Lauffenburger, D. A. (1989). Transport models for chemotactic cell populations based on individual cell behavior. Chem. Eng. Sci. 44, 2881-2897.
    • (1989) Chem. Eng. Sci , vol.44 , pp. 2881-2897
    • Rivero, M.A.1    Tranquillo, R.T.2    Buettner, H.M.3    Lauffenburger, D.A.4
  • 46
    • 0001595172 scopus 로고
    • A theoretical study of receptor mechanisms in bacterial chemotaxis
    • Segel, L. A. (1977). A theoretical study of receptor mechanisms in bacterial chemotaxis. SIAM J. Appl. Math. 32, 654-665.
    • (1977) SIAM J. Appl. Math , vol.32 , pp. 654-665
    • Segel, L.A.1
  • 47
    • 0001409359 scopus 로고
    • Motility and chemotaxis of Rhizobium meliloti in soil
    • Soby, S. & Bergman, K. (1983). Motility and chemotaxis of Rhizobium meliloti in soil. Appl. Environ. Microbiol. 46, 995-998.
    • (1983) Appl. Environ. Microbiol , vol.46 , pp. 995-998
    • Soby, S.1    Bergman, K.2
  • 48
    • 0000019266 scopus 로고
    • Methods for the introduction of bacteria into soil: A review
    • van Elsas, J. D. & Heijnen, C. E. (1990). Methods for the introduction of bacteria into soil: A review. Biol. Fertil. Soils 10, 127-133.
    • (1990) Biol. Fertil. Soils , vol.10 , pp. 127-133
    • Van Elsas, J.D.1    Heijnen, C.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.