메뉴 건너뛰기




Volumn 23, Issue 1, 1995, Pages 97-110

Protein conformational landscapes: Energy minimization and clustering of a long molecular dynamics trajectory

Author keywords

bovine pancreatic trypsin inhibitor; cluster analysis; conformational searching; molecular dynamics; protein tertiary structure

Indexed keywords

APROTININ;

EID: 0029152775     PISSN: 08873585     EISSN: 10970134     Source Type: Journal    
DOI: 10.1002/prot.340230111     Document Type: Article
Times cited : (85)

References (29)
  • 6
    • 84995001636 scopus 로고
    • Molecular dynamics and electrostatic modeling of proteins: Methodologies and applications for conformational sampling, structure prediction, structure refinement and macromolecular association. University of California, San Francisco
    • (1993)
    • Guenot, J.1
  • 14
    • 0026590397 scopus 로고
    • A graphics program for the analysis and display of molecular dynamics trajectories.
    • (1992) J. Mol. Graphics , vol.10 , pp. 33-34
    • Laaksonen, L.1
  • 17
    • 0021104755 scopus 로고
    • Molecular dynamics of native protein II. Analysis and nature of motion.
    • (1983) J. Mol. Biol. , vol.168 , pp. 621-657
    • Levitt, M.1
  • 19
    • 0028292635 scopus 로고
    • Harmonic and anharmonic aspects in the dynamics of BPTI: A normal mode analysis and principal component analysis.
    • (1994) Protein Sci , vol.3 , pp. 936-943
    • Hayward, S.1    Kitao, A.2    Go, N.3
  • 21
    • 0027080858 scopus 로고
    • Molecular dynamics studies of a DNA‐binding protein: 2. An evaluation of implicit and explicit solvent models for the molecular dynamics simulation of the Escherichia‐coli trp repressor.
    • (1992) Protein Sci. , vol.1 , pp. 1185-1205
    • Guenot, J.1    Kollman, P.A.2
  • 23
    • 0028158280 scopus 로고
    • An evaluation of implicit and explicit solvent model systems for the molecular dynamics simulation of bacteriophage T4 lysozyme.
    • (1994) Proteins , vol.18 , pp. 19-33
    • Arnold, G.E.1    Ornstein, R.L.2
  • 25
    • 84995070630 scopus 로고
    • Statistical Sciences, Inc. S‐PLUS User's Manual, Version 3.0. Seattle: Statistical Sciences, Inc
    • (1992)
  • 28
    • 0024585391 scopus 로고
    • Structural basis of hierarchical multiple substates of a protein.
    • (1989) Proteins , vol.5 , pp. 97-138
    • Noguti, T.1    Go, N.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.