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Volumn 251, Issue 1, 1995, Pages 176-187

Recurring local sequence motifs in proteins

Author keywords

Multiple sequence alignments; Protein structure prediction; Sequence comparison; Sequence motifs; Substitution matrices

Indexed keywords

AMINO ACID; GLYCINE; PROTEIN;

EID: 0029112501     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1995.0424     Document Type: Article
Times cited : (76)

References (21)
  • 2
    • 0028173780 scopus 로고
    • Rules for alpha-helix termination by glycine
    • Aurora, R., Srinivasan, R. & Rose, G. D. (1994). Rules for alpha-helix termination by glycine. Science, 264, 1126-1130.
    • (1994) Science , vol.264 , pp. 1126-1130
    • Aurora, R.1    Srinivasan, R.2    Rose, G.D.3
  • 3
    • 0028111863 scopus 로고
    • PROSITE: Recent developments
    • Bairoch, A. & Bucher, P. (1994). PROSITE: recent developments. Nucl. Acids. Res. 22, 3583-3589.
    • (1994) Nucl. Acids. Res. , vol.22 , pp. 3583-3589
    • Bairoch, A.1    Bucher, P.2
  • 4
    • 0025830469 scopus 로고
    • A method to identify protein sequences that fold into a known three-dimensional structure
    • Bowie, J. U., Luthy R. & Eisenberg, D. (1991). A method to identify protein sequences that fold into a known three-dimensional structure. Science, 253, 164-170.
    • (1991) Science , vol.253 , pp. 164-170
    • Bowie, J.U.1    Luthy, R.2    Eisenberg, D.3
  • 6
    • 0015987426 scopus 로고
    • Prediction of protein conformation
    • Chou, P Y. & Fasman, G. D. (1974). Prediction of protein conformation. Biochemistry, 13, 222-245.
    • (1974) Biochemistry , vol.13 , pp. 222-245
    • Chou, P.Y.1    Fasman, G.D.2
  • 7
    • 0002929101 scopus 로고
    • A model of evolutionary change in proteins
    • National Biomedical Research Foundation, Washington, DC
    • Dayhoff, M. O., Eck, R. V. & Park, C. M. (1972). A model of evolutionary change in proteins. In Atlas ofProtein Sequence and Structure. National Biomedical Research Foundation, Washington, DC.
    • (1972) Atlas Ofprotein Sequence and Structure.
    • Dayhoff, M.O.1    Eck, R.V.2    Park, C.M.3
  • 9
    • 0020528412 scopus 로고
    • What is a conservative substitution?
    • French, S. & Robson, B. (1983). What is a conservative substitution? J. Mol. Evol. 19, 171-175.
    • (1983) J. Mol. Evol. , vol.19 , pp. 171-175
    • French, S.1    Robson, B.2
  • 10
    • 0026656815 scopus 로고
    • Exhaustive matching of the entire protein sequence database
    • Gonnet, G., Cohen, M. & Benner, S. (1992). Exhaustive matching of the entire protein sequence database. Science 256, 1443-1445.
    • (1992) Science , vol.256 , pp. 1443-1445
    • Gonnet, G.1    Cohen, M.2    Benner, S.3
  • 11
    • 0028279408 scopus 로고
    • Analysis of amino acid substitution during divergent evolution: The 400 by 400 dipeptide substitution matrix
    • Gonnet, G., Cohen, M. & Benner, S. (1994). Analysis of amino acid substitution during divergent evolution: the 400 by 400 dipeptide substitution matrix. Biochem. Biophys. Res. Commun. 199, 496-498.
    • (1994) Biochem. Biophys. Res. Commun. , vol.199 , pp. 496-498
    • Gonnet, G.1    Cohen, M.2    Benner, S.3
  • 13
    • 0026458378 scopus 로고
    • Amino acid substitution matrices from protein blocks
    • Henikoff, S. & Henikoff, J. G. (1992). Amino acid substitution matrices from protein blocks. Proc. Natl Acad. Sci. USA, 89, 10915-10919.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 10915-10919
    • Henikoff, S.1    Henikoff, J.G.2
  • 14
    • 0027305858 scopus 로고
    • Alignment and searching for common protein folds using a data bank of structural templates
    • Johnson, M., Overington, J. & Blundell, T. (1993). Alignment and searching for common protein folds using a data bank of structural templates. J. Mol. Biol. 231, 735-752.
    • (1993) J. Mol. Biol. , vol.231 , pp. 735-752
    • Johnson, M.1    Overington, J.2    Blundell, T.3
  • 15
    • 0015243774 scopus 로고
    • Identification of common molecular subsequences
    • McLachlan, A. D. (1971). Identification of common molecular subsequences. J. Mol. Biol. 61, 409-424.
    • (1971) J. Mol. Biol. , vol.61 , pp. 409-424
    • McLachlan, A.D.1
  • 16
    • 0024267619 scopus 로고
    • Amino acid substitutions in structurally related proteins, a pattern recognition approach
    • Risler, J. L., Delorme, H. D. & Henaut, A. (1988). Amino acid substitutions in structurally related proteins, a pattern recognition approach. J. Mol. Biol. 204, 1019-1029.
    • (1988) J. Mol. Biol. , vol.204 , pp. 1019-1029
    • Risler, J.L.1    Delorme, H.D.2    Henaut, A.3
  • 17
    • 0027291015 scopus 로고
    • Prediction of protein secondary structure at better than 70% accuracy
    • Rost, B. & Sander, C. (1993). Prediction of protein secondary structure at better than 70% accuracy. J. Mol. Biol. 232, 584-599.
    • (1993) J. Mol. Biol. , vol.232 , pp. 584-599
    • Rost, B.1    Sander, C.2
  • 18
    • 0026030641 scopus 로고
    • Database of homology-derived protein structures and the structural meaning of sequence alignment
    • Sander, C. & Schneider, R. (1991). Database of homology-derived protein structures and the structural meaning of sequence alignment. Proteins: Struct. Funct. Genet. 9, 56-68.
    • (1991) Proteins: Struct. Funct. Genet. , vol.9 , pp. 56-68
    • Sander, C.1    Schneider, R.2
  • 19
    • 0025641641 scopus 로고
    • Weighting aligned protein or nucleic acid sequences to correct for unequal representation
    • Sibbald, P & Argos, P (1990). Weighting aligned protein or nucleic acid sequences to correct for unequal representation. J. Mol. Biol. 216, 813-818.
    • (1990) J. Mol. Biol , vol.216 , pp. 813-818
    • Sibbald, P.1    Argos, P.2
  • 20
    • 0025010571 scopus 로고
    • Iterative character weighting based on mutation frequency: A new method for constructing phyletic trees
    • van Ooyen, A. & Hogeweg, P (1990). Iterative character weighting based on mutation frequency: a new method for constructing phyletic trees. J. Mol. Evol. 31, 330-342.
    • (1990) J. Mol. Evol. , vol.31 , pp. 330-342
    • Van Ooyen, A.1    Hogeweg, P.2
  • 21
    • 0027496980 scopus 로고
    • Weighting in Sequence Space: A comparison of methods in terms of generalized sequences
    • Vingron, M. & Sibbald, P R. (1993). Weighting in Sequence Space: A comparison of methods in terms of generalized sequences. Proc. Natl Acad. Sci. USA, 90, 8777-8781.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 8777-8781
    • Vingron, M.1    Sibbald, P.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.