Sequence of human tryptophan 2, 3-dioxygenase (TDO2): Presence of a glucocorticoid response-like element composed of a GTT repeat and an intronic CCCCT repeat

Genomics

Volumn 29, Issue 2, 1995, Pages 390-396

  Comings, David E ^a   Muhleman, Donn ^a   Dietz, George ^a   Sherman, Mark ^a   Forest, Gerald L ^a  

^a CITY OF HOPE NATIONAL MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0029100816     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1995.9990     Document Type: Article

References (35)

1. Brown, S-L., and van Praag, H. M. (1990). ''The Role of Serotonin in Psychiatric Disorders,'' Brunner/Mazel, New York.
2. Comings, D. E. (1990a). Blood serotonin and tryptophan in Tourette syndrome. Am. J. Med. Genet. 36: 418-430.
3. Comings, D. E. (1990b). ''Tourette Syndrome and Human Behavior," Hope Press, Duarte, CA.
4. Comings, D. E., and Comings, B. G. (1988). The genetics of Tourette syndrome and its relationship to other psychiatric disorders. In ''Genetics of Neuropsychiatric Diseases" (L. Wetterberg, Ed.), Mac Millan Press Ltd., London.
5. Comings, D. E., and Comings, B. G. (1990). A controlled family history study of Tourette syndrome. II. Alcoholism, drug abuse and obesity. J. Clin. Psychiat. 51: 281-287.
6. Comings, D. E., Comings, B. G., and Knell, E. (1989). Hypothesis: Homozygosity in Tourette syndrome. Am. J. Med. Genet. 34: 413-421.
7. Comings, D. E., Muhleman, D., Dietz, G. W., and Donlon, T. (1991). Human tryptophan oxygenase localized to 4q31: Possible implications for human behavioral disorders. Genomics 9: 301-308.
8. Comings, D. E., Muhleman, D., Gade, R., et al. (1995). Exon and intron mutations in the human tryptophan 2, 3-dioxygenase gene and their potential association with Tourette syndrome, substance abuse and other psychiatric disorders. Submitted for publication.
9. Danesch, U., Hashimoto, S., Renkawitz, R., and Schutz, G. (1983). Transcriptional regulation of the tryptophan oxygenase gene in rat liver by glucocorticoids. J. Biol. Chem. 258: 4750-4753.
10. Danesch, U., Gloss, B., Schmid, W., Schutz, G., Schule, R., and Renkawitz, R. (1987). Glucocorticoid induction of the rat tryptophan oxygenase gene is mediated by two widely separated glucocorticoid-responsive elements. Em Bo J. 6: 625-630.
11. Engelman, D. M., Steitz, T. A., and Goldman, A. (1986). Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins. Annu. Rev. Biophys. Chem. 15: 321.
12. Feigelson, P., and Brady, F. O. (1974). Heme-containing dioxygenases. In "Molecular Mechanisms of Oxygen Activation" (O. Hayai-shi, Ed.), p. 87, Academic Press, New York.
13. Fernstrom, J. D. (1983). Role of precursor availability in the control of monamine biosynthesis in brain. Physiol. Rev. 63: 484-546.
14. Gupta, S. L., and Dai, W. (1990). Molecular cloning, sequencing and expression of human interferon-gamma-inducible indoleamine 2, 3-dioxygenase c DNA. Biochem. Biophys. Res. Commun. 168: 1-8.
15. Hattori, M., and Sakaki, Y. (1986). Dideoxy sequencing method using denatured plasmid templates. Anal. Biochem. 152: 232-238.
16. Holton, T. A., and Graham, M. W. (1991). A simple and efficient method for direct cloning of PCR products using dd T-tailed vectors. Nucleic Acids Res. 19: 1156.
17. Jantzen, H-M., Strahle, U., Gloss, B., et al. (1987). Cooperativity of glucocorticoid response elements located far upstream of the tyrosine aminotransferase gene. Cell 49: 29-38.
18. Kyte, J., and Doolittle, R. F. (1982). A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157: 105-132.
19. Lawn, J., Fritsch, E. F., Parker, E. F., Blake, G., and Maniatis, T. (1978). The isolation and characterization of linked delta and beta globin genes from a cloned library of human DNA. Cell 15: 1157-1174.
20. Maezono, K., Tashiro, K., and Nakamura, T. (1990). Deduced primary structure of rat tryptophan-2, 3-dioxygenase. Biochem. Bio-phys. Res. Commun. 170: 176-181.
21. Marnett, L. J., Chen, Y. N., Maddipati, K. R., Ple, P., and Labeque, R. (1988). Functional differentiation of cyclooxygenase and peroxidase activities of prostaglandin synthetase by trypsin treatment. J. Biol. Chem. 263: 16532-16535.
22. Merkulov, V. M., and Merkulova, T. I. (1992). Nucleotide sequence of a fragment of the rat tryptophan oxygenase gene showing high affinity to glucocorticoid receptor in vitro. Biochim. Biophys. Acta 1132: 100-102.
23. Myers, R. M., Tilly, K., and Maniatis, T. (1986). Fine structure genetic analysis of a b-globin promoter. Science 232: 613-618.
24. Najfeld, V., Menniger, J., Muhleman, D., Comings, D. E., and Gupta, S. L. (1993). Localization of indoleamine 2, 3-dioxygenase gene to chromosome 8p12-p11 by fluorescent in situ hybridization. Cyto-genet. Cell Genet. 64: 231-232.
25. Needleman, S. B., and Wunsch, C. D. (1970). A general method applicable to the search for similarities in the amino acid sequence of two proteins. J. Mol. Biol. 48: 443-453.
26. Ohshima, Y., and Gotoh, Y. (1987). Signals for the selection of a splice site in pre-m RNA. Computer analysis of splice junction sequences and like sequences. J. Mol. Biol. 195: 247-259.
27. Sanger, F., Nicklen, S., and Coulson, A. R. (1977). DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74: 5463-5467.
28. Schimke, R. T., Sweeney, E. W., and Berlin, C. M. (1965). The roles of synthesis and degradation in the control of rat liver tryptophan pyrrolase. J. Biol. Chem. 240: 322-331.
29. Schmid, W., Scherer, G., Danesch, U., et al. (1982). Isolation and characterization of the rat tryptophan oxygenase gene. EMBO J. 1: 1287-1293.
30. Schubart, U. K. (1986). Regulation of gene expression in rat hepato-cytes and hepatoma cells by insulin: Quantitation of messenger ribonucleic acid's coding for tyrosine aminotransferase, tryptophan oxygenase, and phosphoenolpyruvate carboxykinase. Endocrinology 119: 1741-1749.
31. Schule, R., Muller, M., Otsuka-Murakami, H., and Renkawitz, R. (1988). Cooperativity of the glucocorticoid receptor and the CACCC-box binding factor. Nature 332: 87-90.
32. Schutz, G., and Feigelson, P. (1972). Purification and properties of rat liver tryptophan oxygenase. J. Biol. Chem. 247: 5327-5332.
33. Shapiro, M. B., and Senapathy, P. (1987). RNA splice junctions of different classes of eukaryotes: Sequence statistics and functional implications in gene expression. Nucleic Acids Res. 17: 7155-7174.
34. Tone, S., Takikawa, O., Habara-Ohkubo, A., Kadoya, A., Yoshida, R., and Kido, R. (1990). Primary structure of human indoleamine 2, 3-dioxygenase deduced from the nucleotide sequence of its c DNA. Nucleic Acids Res. 18: 367.
35. Whitaker-Azmita, P. M., and Peroutka, S. J. (1990). ''The Neuropharmacology of Serotonin," Proc. N.Y. Acad. Sci., New York.