Single strand targeted triplex-formation. Destabilization of guanine quadruplex structures by foldback triplex-forming oligonucleotides

Nucleic Acids Research

Volumn 23, Issue 6, 1995, Pages 1068-1074

  Kandimalla, Ekambar R ^a   Agrawal, Sudhir ^a  

^a HYBRIDON INC   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTISENSE OLIGONUCLEOTIDE; GUANINE; POTASSIUM ION; SINGLE STRANDED DNA; SODIUM ION;

ARTICLE; DIMERIZATION; DNA STRUCTURE; EUKARYOTE; GENE TARGETING; GENETIC STABILITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RETROVIRUS; RNA STRUCTURE; TRIPLE HELIX;

BASE SEQUENCE; DNA; DNA, ANTISENSE; GENES, GAG; GUANINE; HIV-1; HYDROGEN-ION CONCENTRATION; METHYLATION; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; OLIGODEOXYRIBONUCLEOTIDES; POTASSIUM; RNA; RNA, ANTISENSE; SODIUM;

EID: 0028961229     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/23.6.1068     Document Type: Article

References (43)

1. Uhlmann, E. And Peyman, A. (1990) Chem. Rev. 90, 543-584.
2. Thoung, N. T. And Helene, C. (1993) Angew. Chem. Int. Ed. Engl. 32, 666-690.
3. Agrawal, S. (1992) TIBTech. 10, 152-158.
4. Agrawal, S. And Leiter, M.E. (1992) in: Antisense RNA and DNA (Murray, J.A.H. ed) Wiley-Liss, New York.
5. Stein, C.A. And Chang, Y.C. (1993) Science 261, 1004-1012.
6. Agrawal, S. And Tang, J.Y. (1992) Antisense Res. Dev. 2, 261-266.
7. Bayever, E., Iverson, P.L., Bishop, M.R., Sharp, J.G., Tewary, H.K., Ameson, M.A., Pimiccello, SJ., Ruddon, R.W., Kessinger, A., Zon, G. And Armitage, M.A. (1993) Antisense Res. Dev. 3, 383-390.
8. Ecker, DJ. (1993) in: Antisense Research and Applications (Crooke, S.T. And Lebleu, B. eds.), CRC Press, Boca Raton, FL, pp 387-400.
9. Ecker, DJ., Vivkers, T„ Bruice, T.W., Frier, S.M., Jenison, R.D., Manoharan, M. And Zounes, M. (1992) Science 257, 958.
10. Prats, A.-C., Roy, C., Wang, P., Erard, M., Housset, V., Gabus, C., Paoletti, C. And Darhx, J.L. (1990) J. Virol. 64, 774-783.
11. Blackburn, E.H. (1991) Nature 350, 569-573.
12. Srruth, F.W. And Feigon, J. (1992) Nature 356, 164-168.
13. Kang, C., ZJiang, X., Ralliff, R., Moyzis, R. And Rich, A. (1992) Nature 356, 126-131.
14. Sen, D. And Gilbert, W. (1988) Nature 334, 364—366.
15. Sundquist, W.I. And Klug, A. (1989) Nature 342, 825-829.
16. Panyutin, I.G., Kovalsky, O.I., Budowsky, E.I., Dickerson, R.E., Rikhirev, M.E. And Lipanov, A.A. (1990) Proc. Natl. Acad. Sci. USA 87, 867-870.
17. Kim, J., Cheong, C. And Moore, P.B. (1991) Nature 351, 331-332.
18. Baudin, F., Marquet, R., Isel, C., Darlix, J.L., Ehresmann, B. And Ehresmann, C. (1993) J. Mol. Biol. 229, 382-397.
19. Sundquist, W.I. And Heaphy, S. (1993) Proc. Natl. Acad. Sci. USA 90, 3393-3397.
20. Awang, G. And Sen, D. (1993) Biochemistry 32, 11453-11457.
21. Kool, E.T (1991) J. Am. Chem. Soc. 113, 6265-6266.
22. Prakash, G. And Kool, E.T. (1992) J. Am. Chem. Soc. 114, 3523—3528.
23. Kandimalla, E.R. And Agrawal, S. (1993) J. Biomolec. Struct. Dyn. 10, 086.
24. Kandimalla, E.R. And Agrawal, S. (1994) Gene 149, 115-121.
25. Xodo, L.E., Manzini, G. And Quadnfoglio, F. (1990) Nucleic Acids Res. 18, 3557-3564.
26. Giovannangeli, C., Montenay-Garestier, T., Rougee, M.; Chassignol, M., Thoung, N.T. And Helene, C. (1991) J. Am. Chem. Soc. 113, 7775-7776.
27. Giovannangeli, C., Thoung, N.T. And Helene, C. (1993) Proc. Natl. Acad Sci. USA.90, 10013-10017.
28. Hardin, C.C., Henderson, E., Watson, T. And Prosser, J.K. (1991) Biochemistry 30, 4460-4472.
29. Sen, D. And Gilbert, W. (1990) Nature 344, 410-414.
30. Lee, J.S. (1990) Nucleic Acids Res. 18, 6057-6060.
31. Lu, M., Guo, Q. And Kallenbach, N.R. (1993) Biochemistry 32, 598-601.
32. Sen, D. And Gilbert, W. (1992) Biochemistry 31, 65—70.
33. Roberts, R.W. And Crothers, D.M. (1992) Science 258, 1463-1465.
34. Wang, Y. And Patel, DJ. (1992) Biochemistry 31, 8112-8119.
35. Macaya, R.F., Schultz, P., and Feigon, J. (1992) J. Am. Chem. Soc. 114, 781-783.
36. Radhakrishnan, I. And Patel, DJ. (1993) J. Am. Chem. Soc. 115, 1615-1617.
37. Raghunathan, G., Miles, H.T. And Sasisekharan, V. (1993) Biochemistry 32, 455-462.
38. Han, H. And Dervan, P.B. (1993) Proc. Natl. Acad. Sci. USA 90, 3806-3810.
39. Escude, C., Francois, J.C., Sun, J.S., Ott, G„ Sprinzl, M., Garestier, T. And Helene, C. (1993) Nucleic Acids Res. 21, 5547-5553.
40. Sproat, B.S., Lamond, A.I., Beijer, B., Neuner, P. And Ryder, U. (1989) Nucleic Acids Res. 17, 3373—3564
41. Shimizu, M., Konishi, A., Shimada, Y., Inoue, H. And Ohtsuka, E. (1992) FEBSLett. 302, 155-158
42. Nielsen, P.E., Egholm, M., Berg, R.H. And Buchardt, O. (1991) Science 254, 1497-1500.
43. Tietze, L.F. (1990) in: Molecular Aspects of Chemotherapy (Borowski, E. And Shugar, D. eds.), Pergamon Press, New York, NY, pp 55-70.