Crystal structure of the replication terminator protein from B. subtiiis at 2.6 Å

Cell

Volumn 80, Issue 4, 1995, Pages 651-660

  Eli Bussiere, Dirksen ^a   Bastia, Deepak ^a   Stephen White, W ^a  

^a DUKE UNIVERSITY MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DIMER;

ARTICLE; BACILLUS SUBTILIS; CRYSTAL STRUCTURE; DIMERIZATION; DNA BINDING; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA INTERACTION; PROTEIN FOLDING; PROTEIN STRUCTURE;

BACILLUS SUBTILIS;

EID: 0028918469     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/0092-8674(95)90519-7     Document Type: Article

References (62)

1. The nucleotide sequence surrounding the replication terminus of R6K
2. Escherichia coli replication terminator protein impedes simian virus 40 (SV40) DNA replication fork movement and SV40 large tumor antigen helicase activity in vitro at a prokaryotic terminus sequence
3. Free R value: a novel statistical quantity for assessing the accuracy of crystal structures
4. Aromatic-aromatic interaction: a mechanism of protein structure stabilization
5. Normal terC-region of the Bacillus subtilis chromosome acts in a polar manner to arrest the clockwise replication fork
6. The packing of a-helices simple coiled-coils
7. A second class of synthetase structure revealed by X-ray analysis of Escherichia coli seryl-tRNA synthetase at 2.5 Å
8. DNA structural variations in the E. coli tyrT promoter
9. PHASES
10. Equilibrium, kinetic, and footprinting studies of the Tus-Ter protein-DNA interaction
11. Representation of phase probability distributions for simplified combination of independent phase information
12. Differential inhibition of the DNA translocation and DNA unwinding activities of DNA helices by the Escherichia coli Tus protein
13. Nucleotide sequence of Bacillus subtilis DnaB: a gene essential for DNA replication and membrane attachment
14. Improved methods for building protein models in electron density maps and the location of errors in these models
15. The replication terminator protein of the gram positive bacterium B. subtilis functions as a polar contrahelicase in gram negative E. coli.
16. The replication terminator protein of E. coli is a DNA sequence-specific contra-helicase
17. Co-crystal structure of TBP recognizing the minor groove of a TATA element
18. Crystal structure of a yeast TBP/TATA-box complex
19. Threedimensional structure of the p subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp
20. Effect of non-contacted bases on the affinity of 434 operator for 434 repressor and Cro.
21. A sequence similarity between proteins involved in initiation and termination of bacterial chromosome replication
22. Symmetry and secondary structure of the replication terminator protein of Bacillus subtilis: sedimentation equilibrium and circular dichroic, infrared, and NMR spectroscopic studies
23. MOLSCRIPT a program to produce both detailed and schematic plots of protein structures
24. Terminus region of the chromosome in Escherichia coli inhibits replication forks
25. Protein-nucleoside contacts in the interaction between the replication terminator protein of Bacillus subtilis and the DNA terminator
26. The interpolation of protein structures: estimation of static accessibility
27. Features of replication fork blockage by the E. coli terminus binding protein
28. Structural patterns in globular proteins
29. Termination of chromosomal replication in Bacillus subtilis
30. DNA and protein sequence conservation at the replication terminus in Bacillus subtilis 168 and W23
31. Identification of the replication terminator protein binding sites in the terminus regions of the Bacillus subtilis chromosome and the stoichiometry of binding
32. Assessment of protein models with three-dimensional profiles
33. − E. coil by purified ter protein and analysis of termination intermediates
34. Solvent content of protein crystals
35. Crystallization and preliminary structural analysis of the replication terminator protein of Bacillus subtilis
36. A 27 kd protein of E. coli promotes antitermination of replication in vitro at a sequencespecific replication terminus
37. Springs and hinges: dynamic coiled-coils and discontinuities
38. Structural basis of protein-nucleic acid interactions
39. X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil
40. The operator-binding domain of lambda repressor structure and DNA recognition
41. The N-terminal arms of lambda repressor wrap around the operator DNA
42. Updating structure-function relationships in the bZip family of transcription factors
43. Improving crystallographic macromolecular images: the real-space approach
44. Areas, volumes, packing, and protein structure
45. Termination of DNA replication in vitro requirement for specific stereochemical interactions between two dimers of the replication terminator protein and the terminator site for eliciting polar contrahelicase activity and fork impedance
46. In vitro type II binding of chromosomal DNA to membrane in Bacillus subtilis
47. The energetics of ion-pair and hydrogen-bonding interactions in a helical peptide
48. Crystal structure of a CAP-DNA complex: the DNA is bent by 90°
49. Electrostatic interaction in macromolecules
50. DNA-protein interaction at the replication termini of plasmid R6K
51. Definition and polarity of action of DNA replication terminators in Bacillus subtilis
52. Structural studies of protein-nucleic acid interaction: the sources of sequence-specific binding
53. Use of T7 RNA polymerase to direct the expression of cloned genes
54. Membrane attachment of the chromosome replication origin in Bacillus subtilis
55. 3-Å resolution structure of a protein with histone-like properties in prokaryotes
56. Resolution of phase ambiguity in macromolecular crystallography
57. A unique DNA intermediate associated with termination of chromosome replication in Bacillus subtilis
58. A protein structural motif that bends DNA
59. Geometry of the rotation method
60. The interaction of E. coli IHF protein with its specific binding sites