Dissecting RNA-protein interactions: RNA-RNA recognition by Rop

Cell

Volumn 80, Issue 1, 1995, Pages 41-50

  Predki, Paul F ^a   Mike Nayak, L ^a   Gottlieb, Morris B C ^a   Regan, Lynne ^a  

^a YALE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MUTANT PROTEIN; RNA; RNA BINDING PROTEIN;

ARTICLE; BINDING SITE; MOLECULAR RECOGNITION; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN STRUCTURE; RNA ANALYSIS; RNA STRUCTURE;

EID: 0028873824     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/0092-8674(95)90449-2     Document Type: Article

References (45)

1. FMR1 protein: conserved RNP family domains and selective RNA binding
2. Structure of the CoIE1 rop protein at 1.7 Å resolution
3. Tyrosyl-tRNA synthetase forms a mononucleotide-binding fold
4. Ser
5. Structure of tyrosyltRNA synthetase refined at 2.3 Å resolution
6. Conserved structures and diversity of function of RNA-binding proteins
7. Genetic and structural analysis of the ColE1 Rop (Rom) protein
8. High-resolution epitope mapping of hG H-receptor interactions by alanine-scanning mutagenesis
9. A second class of synthetase structure revealed by x-ray analysis of Escherichia coli seryl-tRNA synthetase at 2.5 Å
10. Proton nuclear magnetic resonance assignments and secondary structure determination of the ColEl rop (rom) protein
11. The structure of ColEl rop in solution
12. Complex formed by complementary RNA stem-loops and its stabilization by a protein: function of CoIE1 Rom protein
13. Complex formed by complementary RNA stem-loops: their formations, structures and interaction with CoIE1 Rom protein
14. 1H-NMR.
15. Human immunodeficiency virus type 1 regulator of virion expression, rev, forms nucleoprotein filaments after binding to a purine-rich “bubble” located within the rev-responsive region of viral mRNAs
16. Formation of an RNA primer for initiation of replication of CoIE1 DNA by ribonuclease H
17. Identification of molecular contacts between the U1 A small nuclear ribonuclearprotein and Ul RNA
18. Primary structure and binding activity of the hnRNP U protein: binding RNA-through RGG box
19. Co-crystal structure of TBP recognizing the minor groove of a TATA element
20. Crystal structure of a yeast TBP-TATA-box complex
21. MOLSCRIPT a program to produce both detailed and schematic plots of protein structures
22. Sequence-specific recognition of RNA hairpins by bacteriophage antiterminators requires a conserved arginine-rich motif
23. Side chain contributions to the stability of alpha-helical structure in peptides
24. Phenylalanines that are conserved among several RNAbinding proteins form part of a nucleic acid-binding pocket in the A1 heterogeneous nuclear ribonucleoprotein
25. ColE1-compatible vectors for high-level expression of cloned DNAs from the T7 promoter
26. Redesigning the hydrophobic core of a four-helix-bundle protein
27. Crystal structure of the RNA-binding domain of the U1 small nuclear ribonucleoprotein A
28. Protein folding and association insights from the interfacial and thermodynamic properties of hydrocarbons
29. A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids
30. ColE1 replication control circuitry: sense from antisense
31. 1H-NMR (500 MHz) identification of aromatic residues of gene 32 protein involved in DNA binding by use of protein containing perdeuterated aromatic residues and by site-directed mutagenesis
32. DNA recognition by β-sheets in the Arc repressor-operator crystal structure
33. Gln and ATP at 2.8 angstrom resolution
34. Structural basis of anticodon loop recognition by glutaminyl-tRNA synthetase
35. Asp
36. Crystallographic refinement of ricin to 25 Å resolution
37. DNA sequencing with chain terminating inhibitors
38. The protein product of the fragile X gene, FMR1, has characteristics of an RNA-binding protein
39. The pre-mRNA binding K protein contains a novel evolutionary conserved motif
40. Studying a helix and β sheet formation in small proteins
41. Subunit interactions provide a significant contribution to the stability of the dimeric four-α-helical-bundle protein Rop
42. Control of ColE1 plasmid replication: the process of binding of RNA I to the primer transcript
43. The importance of RNA secondary structure in ColE1 primer formation
44. Control of ColEl plasmid replication: enhancement of binding of RNA I to the primer transcript by the Rom protein
45. Crystal structure of Escherichia coli methionyl-tRNA synthetase at 2.5 angström resolution