Identification and Transcriptional Analysis of a 3′-Coterminal Gene Cluster Containing UL1, UL2, UL3, and UL3.5 Open Reading Frames of Bovine Herpesvirus-1

Virology

Volumn 213, Issue 1, 1995, Pages 28-37

  Khattar, Sunil K ^a   Van Drunen Littel Van Den Hurk, Sylvia ^a   Babiuk, Lorne A ^a   Tikoo, Suresh K ^a  

^a UNIVERSITY OF SASKATCHEWAN   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA;

ARTICLE; BOVINE HERPES VIRUS; CONTROLLED STUDY; DNA SEQUENCE; GENE CLUSTER; GENETIC TRANSCRIPTION; MOLECULAR CLONING; NONHUMAN; NORTHERN BLOTTING; OPEN READING FRAME; PRIORITY JOURNAL; VIRUS TRANSCRIPTION;

AMINO ACID SEQUENCE; ANIMAL; BASE SEQUENCE; BLOTTING, NORTHERN; CATTLE; COMPARATIVE STUDY; DNA, VIRAL; HERPESVIRUS 1, BOVINE; HERPESVIRUS 1, EQUID; HERPESVIRUS 1, HUMAN; HERPESVIRUS 1, SUID; HERPESVIRUS 3, HUMAN; KIDNEY; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; OPEN READING FRAMES; RNA; RNA, VIRAL; SEQUENCE HOMOLOGY, AMINO ACID; SUPPORT, NON-U.S. GOV'T; TATA BOX; TRANSCRIPTION, GENETIC;

EID: 0028829420     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1006/viro.1995.1543     Document Type: Article

References (49)

1. Baer, R., Bankier, A. T., Biggin, M. D., Deininger, P. L., Farrell, P. J. Gibson, P. J., Hatful, G., Hudson, G. S., Satchwell, S. C., Sequin, C., Tuffnell, P. S. and Barrell, B. G. (1984). DNA sequence and expression of the B95-8 Epstein-Barr virus genome. Nature (London) 310, 207-211.
2. Ben Porat, T., and Kaplan, A. S. (1985). Molecular biology of pseudorabies virus. In The Herpesviruses, (B. Roizman, Ed.), Vol. 3, pp. 105-173. Plenum, New York.
3. Ben Porat, T., Veach, R., and lhara, S. (1983). Localization of the regions of homology between genomes of herpes simplex virus type 1 and pseudorabies virus. Virology 127, 194-204.
4. Bolton, D. C., Chung, Z., and Ardans, A. A. (1983). Identification of envelope and nucleocapsid proteins of infectious bovine rhinotra cheitis virus by SDS-polyacrylamide gel electrophoresis. Vet. Microbiol. 8, 57-68.
5. Brown, F. (1989). The classification and nomenclature of viruses. Summary of results of meeting of the international committee on taxonomy of viruses in Edmonton, Canada, 1987. Intervirology 30, 181-186
6. Caradonna, S. J., and Cheng, Y. C. (1980), Uracil-DNA glycosylase. I Biol. Chem. 255, 2293-2300.
7. Chee, M. S., Bankier, A. T., Beck, S., Bohni, R., Brown, C. M. Corny, R., Horsnell, T., Hutchinson, C. A. III, Kouzarides, T., Martignetty, J. A., and Barrell, B. G. (1990). Analysis of the protein coding content of the sequence of the human cytomegalovirus strain AD 169. Curr. Top. Microbiol. Immunol. 154, 127-169
8. Cheung, A. K. (1991). Cloning of the latency gene and the early protein 0 gene of pseudorabies virus. J. Virol. 65, 5260-5271.
9. Chomczynski, P., and Sacchi, N. (1987). Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162, 155-159.
10. Davison, A. J., and Scott, J E. (1986). The complete DNA sequence of varicella-zoster virus. J. Gen. Virol. 67, 1759-1816.
11. Dean, H. J., and Cheung, A. K. (1993), A 3 coterminal gene cluster in pseudorabies virus contains herpes simplex virus UL1, UL2, and UL3 gene homologs and a unique UL3.5 open reading frame. J. Virol. 67, 5955-5961.
12. Forghani, B. Ni, L., and Grone, C. (1994), Neutralizing epitope of the varicella-zoster virus gH: gL glycoprotein complex. Virology 199, 458-462.
13. Hutchinson, L., Browne, H., Wargent, V., Davis Poynter, N., Primorac, S., Goldsmith, K., Minson, A. C. and Johnson, D. C. (1992). A novel herpes simplex virus glycoprotein, gL, forms a complex with glycoprotein H (gH) and affects normal folding and surface expression of gH. J. Virol. 66, 2240-2250.
14. Kaye, J. F., Gompels, U. A., and Minson, A. C. (1992). Glycoprotein gH of human cytomegalovirus (HCMV) forms a stable complex with the HCMV UL115 gene product. J. Gen. Virol. 73, 2693-2698.
15. Klupp, B. G., Baumeister, J., Karger, A., Visser, N., and Mettenleiter, T. C. (1994). Identification and characterization of a novel structural glycoprotein in pseudorabies virus, gL. J. Virol. 68, 3868-3878.
16. Kornfeld, R., and Kornfeld, S. (1985). Assembly of asparagine linked oligosaccharides. Anno. Rev. Biochem. 54, 631-664.
17. Liu, D. X., Gompels, U. A., Foa Tomasi, L., and Campadelli Fiume, G. (1993a). Human herpesvirus 6 glycoprotein H and L homoiogs are components of the gp100 complex and the gH external domain is the target for neutralising monoclonal antibodies. Virology 197, 12-22.
18. Liu, D. X., Gompels, U. A., Nicholas, J., and Lelliott, C. (1993b). Identification and expression of the human herpesvirus 6 glycoprotein H and interaction with an accessory 40 K glycoprotein. J. Gen. Virol. 74, 1847-1857.
19. Mayfield, J. E., Good, P. J., van Oort, H. J., Campbell, A. R. and Reed, D E. (1983). Cloning and cleavage site mapping of DNAfrom bovine herpesvirus-1 (Cooper strain). J. Virol. 47, 259-264.
20. McGeoch, D. J., Cunningham, C., McIntyre, G., and Dolan, A. (1991). Comparative sequence analysis of the long repeat regions and adjoining parts of the long unique regions in the genome of herpes simplex viruses types 1 and 2. J. Gen. Virol. 72, 3057-3075.
21. McGeoch, D. J., Dalrymple, M. A., Davison, A. J., Dolan, A., Frame, M. C., McNab, D., Perry, L. J., Scott, J. E., and Taylor, P. (1988), The complete DNA sequence of the long unique region in the genome of herpes simplex virus type 1, J. Gen. Virol. 69, 1531-1574.
22. Misra, V., Blumenthal, R. L, and Babiuk, L. A. (1981). Proteins specified by bovine herpesvirus 1 (infectious bovine rhinotracheitis virus). J. Virol. 40, 367-378.
23. Moriuchi, H., Moriuchi, M., Smith, H A., Straus, S. E., and Cohen, J. I. (1992). Varicella-zoster virus open reading frame 61 protein is functionally homologous to herpes simplex virus type 1 ICP0. J. Virol. 66, 7303-7308.
24. Mullaney, J., Moss, H. W., and McGeoch, D. J. (1989). Gene UL2 of herpes simplex virus type 1 encodes a uracil-DNA glycosylase. J. Gen. Virol. 70, 449-454.
25. Olsen, L. C., Aasland, R., Wittwer, C. V., Krokan, H. E., and Helland, D. E. (1989). Molecular cloning of human uracil-DNA glycosylase, a highly conserved DNA repair enzyme, EMBO J. 8, 3121-3125.
26. Pelletier, J., and Sonenberg, N. (1988). Internal initiation of translation of eukaryotic mRNA directed by a sequence derived from poliovirus RNA. Nature 334, 320-325.
27. Plummer, G., Goodheart, C. R., Henson, D., and Bowling, C. P. (1969). A comparative study of the DNA density and behavior in tissue culture of fourteen different herpesviruses. Virology 39, 134-137.
28. Pyles, R. B., and Thompson, R. L. (1994). Evidence that the herpes simplex virus type 1 uracil-DNA glycosylase is required for efficient viral transcription and latency in the murine nervous system. J. Virol. 68, 4963-4972.
29. Rigby, P. W., Dieckmann, M., Rodes, C., and Berg, P. (1977). Labelling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. J. Mol. Biol. 113, 237-251.
30. Roizman, B., Carmichael, L. E., Deinhart, F., de The, G., Nahmias, A. J., Plowright, W., Rapp, F., Sheldrich, P., Takahashi, M., and Wolfy, K. (1982). Herpesviridae: Definition, provisional nomenclature and taxonomy. Intervirology 16, 201-217.
31. Rouse, B. T., and Babiuk, L. A. (1978). Mechanisms of recovery from herpesvirus infections. Can. J. Comp. Med. 42, 414-427.
32. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual.’ 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY.
33. Sancar, A., and Sancar, G. B. (1988). DNA repair enzymes. Anna. Rev. Biochem. 57, 29-67.
34. Seal, B. S., Irving, J. M., and Whetstone, C. A. (1991), Transcriptional analysis of bovine herpesvirus 1 Cooper isolate. Temporal analysis and characterization of immediate-early, early and late RNA. Arch. Virol. 121, 55-73.
35. Spaete, R. R., Perot, K., Scott, P., Nelson, J. A., Stinski, M. F., and Pachl, C. (1993). Co-expression of truncated human cytomegalovirus gH with the UL115 gene product or the truncated human fibroblast growth factor receptor results in transport of gH to the cell surface. Virology 193, 853-861.
36. Southern, E. M. (1975). Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98, 503-517.
37. Telford, E., Watson, M., McBride, K., and Davison, A. (1992). The DNA sequence of equine herpesvirus-1. Virology 189, 304-316.
38. Tikoo, S. K., Campos, M., and Babiuk, L. A. (1995). Bovine herpesvirus 1 (BHV-1): Biology, pathogenesis, and control. Adv. Virus Res. 45, 191-223.
39. Vlcek, C., Benes, V., Lu, Z., Kutish, G. F., Paces, V., Rock, D., Letchworth, G. J., and Schwyzer, M. (1995). Nucleotide sequence analysis of a 30-kb region of the bovine herpesvirus 1 genome which exhibits a colinear gene arrangement with the UL21 to UL4 genes of herpes simplex virus. Virology 210, 100-108.
40. von Heijne, G. (1986). A new method for predicting signal sequence cleavage sites. Nucleic Acids Res. 14, 4683-4690.
41. Varshney, U., Hutcheon, T., and van de Sande, J. H. (1988). Sequence analysis, expression and conservation of Escherichia coti uracil- DNA glycosylase and its gene (ung). J. Biol. Chem. 263, 7776-7784.
42. Wirth, U. V., Fraefel, C., Vogt, B., Vleck, C., Paces, V., and Schwyzer, M. (1992). Immediate early RNA 2.9 and early RNA 2.6 of bovine herpes virus 1 are coterminal and encode a putative zinc finger transactivator protein. J. Virol. 66, 2763-2772.
43. Wirth, U. V., Gunkel, K., Engels, M., and Schwyzer, M. (1989). Spatial and temporal distribution of bovine herpesvirus 1 transcripts. J. Virol 63, 4882-4889.
44. Worrad, D. M., and Caradonna, S. (1988). Identification of the coding sequence for herpes simplex virus uracil-DNA glycosylase. J. Virol. 62, 4774-4777.
45. Worrad, D. M., and Caradonna, S. (1993). The herpes simplex virus type 2 UL3 open reading frame encodes a nuclear localizing phos-phoprotein. Virology 195, 364-376.
46. Wyler, R., Engels, M., and Schwyzer, M. (1989). Infectious bovine rhino tracheitis vulvovaginitis (BHV-1). In Herpesvirus Diseases of Cattle, Horses, and Pigs. Developments in Veterinary Virology (G. Wittman, Ed.). Kluwer Academic, Boston.
47. Yaswen, L R., Campbell, C., Devenport, L. C., Stephens, E. B., and Hutt Fletcher, L. M. (1992). Expression and analysis of the Epstein-Barr virus gH. 17th Int. Herpesvirus Workshop, Abstract 273.
48. Yates, W. D. G. (1982). A review of infectious bovine rhinotracheitis, shipping fever pneumonia and viral bacterial synergism in respiratory disease of cattle. Can. j. Comp. Med. 46, 225-263.
49. Yoshida, S., Lee, L. F., Yanagida, N., and Nazerian, K. (1994). Identification and characterization of a Marek’s disease virus gene homologous to glycoprotein L of herpes simplex virus. Virology 204, 414-419.