Methylphosphonate mapping of phosphate contacts critical for RNA recognition by the human immunodeficiency virus tat and rev proteins

Nucleic Acids Research

Volumn 22, Issue 13, 1994, Pages 2592-2600

  Pritchard, Clare E ^a   Grasby, Jane A ^a   Hamy, François ^a   Zacharek, Anthony M ^a,b   Singh, Mohinder ^a   Karn, Jonathan ^a   Gait, Michael J ^a  

^a MRC LABORATORY OF MOLECULAR BIOLOGY   (United Kingdom)

^b HARVARD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; DOUBLE STRANDED RNA; HYDROGEN; METHYLPHOSPHONIC ACID; PHOSPHATE; REGULATOR PROTEIN; RNA BINDING PROTEIN; VIRUS PROTEIN;

ARTICLE; BASE PAIRING; BINDING SITE; CONTROLLED STUDY; DIASTEREOISOMER; HUMAN IMMUNODEFICIENCY VIRUS 1; HYDROGEN BOND; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; RNA CONFORMATION; RNA STRUCTURE;

BASE COMPOSITION; BASE SEQUENCE; BINDING SITES; CLONING, MOLECULAR; GENE PRODUCTS, REV; GENE PRODUCTS, TAT; HIV-1; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; ORGANOPHOSPHORUS COMPOUNDS; PHOSPHATES; RNA, VIRAL; STEREOISOMERISM;

HUMAN IMMUNODEFICIENCY VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1;

EID: 0028337047     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/22.13.2592     Document Type: Article

References (45)

1. Kam J., (1991) Current Opinion in Immunol., 3, 526-536.
2. Gait, M. J., and Kam J., (1993) TIBS, 18, 255-259.
3. Cullen, B. R., (1986) Cell, 46, 973-982.
4. Rosen, C. A., Sodroski, J. G., and Haseltine, W. A., (1985) Cell, 41, 813-823.
5. Muesing, M. A., Smith, D. H., and Capon, D. J., (1987) Cell, 48, 691-701.
6. Dingwall, C., Emberg, I., Gait, M. J., Green, S. M., Heaphy, S., Kam J., Lowe, A. D., Singh, M., Skinner, M. A., and Valerio, R., (1989) Proc. Natl. Acad. Sei. USA, 86, 6925-6929.
7. Dingwall, C., Emberg, I., Gait, M. J., Green, S. M., Heaphy, S., Kam J., Lowe, A. D., Singh, M., and Skinner, M. A., (1990) EMBO J., 9, 4145-4153.
8. Roy, S., Delling, U., Chen, C.-H., Rosen, C. A., and Sonenberg, N., (1990) Genes & Devel., 4, 1365-1373.
9. Weeks, K. M., and Crothers, D. M., (1991) Cell, 66, 577-588.
10. Sumner-Smith, M., Roy, S., Barnett, R., Reid, L. S., Kuperman, R., Delling, U., and Sonenberg, N., (1991) J. Virol., 65, 5196-5202.
11. Delling, U., Reid, L. S., Barnett, R. W., Ma, M. Y.-X., Climie, S., Sumner-Smith, M., and Sonenberg, N., (1992) J. Virol., 66, 3018-3025.
12. Churcher, M., Lamont, C., Dingwall, C., Green, S. M., Lowe, A. D., Butler, P. J. G., Gait, M. J., and Kam J., (1993) J. Mol. Biol, 230, 90-110.
13. Daly, T. J., Cook, K. S., Gary, G. S., Maione, T. E., and Rusche, J. R., (1989) Nature, 342, 816-819.
14. Heaphy, S., Dingwall, C., Emberg, I., Gait, M. J., Green, S. M., Kam I., Lowe, A. D., Singh, M., and Skinner, M. A., (1990) Cell, 60, 685-693.
15. Malim, M. H., Hauber, J., Le, S.-Y., Maizel, J. V., and Cullen, B. R., (1989) Nature, 338, 254-257.
16. Malim, M. H., Tiley, L. S., McCam, D. F., Rusche, J. R., Hauber, J., and Cullen, B. R., (1990) Cell, 60, 675-683.
17. Zapp, M. L., and Green, M. R., (1989) Nature, 342, 714-716.
18. Mann, D. A., Mikaélian, I., Zemmel, R., Green, S. M., Lowe, A. D., Kimura, T., Singh, M., Butler, P. J. G., Gait, M. J., and Kam J., (1994) J. Mol. Biol., in press.
19. Heaphy, S., Finch, J. T., Gait, M. J., Kam J., and Singh, M., (1991) Proc. Natl. Acad. Sei. USA, 88, 7366-7370.
20. Kjems, J., Brown, M., Chang, D. D., and Sharp, P. A., (1991) Proc. Natl. Acad. Sei. USA, 88, 683-687.
21. Malim, M. H., and Cullen, B. R., (1991) Cell, 65, 241-248.
22. Kjems, J., Calnan, B. J., Frankel, A. D., and Sharp, P. A., (1992) EMBO J., II, 1119-1129.
23. Tiley, L. S., Malim, M. H., Tewary, H. K., Stockley, P. G., and Cullen B. R., (1992) Proc. Natl. Acad. Sei. USA, 89, 758-762.
24. Bartel, D. P., Zapp, M. L., Green, M. R., and Szostak, J. W., (1991) Cell, 67, 529-536.
25. Iwai, S., Pritchard, C., Mann, D. A., Kam J., and Gait, M. J., (1992) Nucl. Acids Res., 20, 6465-6472.
26. Pavlevitch, N. P., and Pabo, C. O., (1991) Science, 252, 809-817.
27. Feng, J.-A., Johnson, R. C., and Dickerson, R. E., (1994) Science, 263, 348-355.
28. Calnan, B. J., Tidor, B., Biancalana, S., Hudson, D., and Frankel, A. D., (1991) Science, 252, 1167-1171.
29. Tao, J., and Frankel, A. D., (1992) Proc. Natl. Acad. Sei. USA, 89, 2723-2726.
30. Hamy, F., Asseline, U., Grasby, J., Iwai, S., Pritchard, C., Slim, G., Buüer, P. J. G., Kam J., and Gait, M. J., (1993) J. Mol. Biol., 230, 111-123.
31. Grasby, J. A., Butler, P. J. G., and Gait, M. J., (1993) Nucl. Acids Res., 21, 4444-4450.
32. Pieken, W. A., Olsen, D. B., Benseler, F., Aurup, H., and Eckstein, F., (1991) Science, 253, 314-317.
33. Grasby, J. A., Pritchard, C. E., Mersmann, K., Seela, F., and Gait, M. J., (1993) Coll. Czech. Chem. Commun., 58, 154-157.
34. Kam J., Churcher, M. J., Rittner, K., Kelley, A. C., Butler, P. J. G., Mann, D. A., and Gait, M. J., (1994) In HIV: A Practical Approach, J. Kam (ed.), Oxford University Press, Oxford, in press.
35. Lebedev, A. V., Frauendorf, A., Vyazovkina, E. V., and Engels, J. W., (1993) Tetrahedron, 49, 1043-1052.
36. Giver, L., Bartel, D., Zapp, M., Pawul, A., Green, M., and Ellington, A. D., (1993) Nucl. Acids Res. 21, 5509-5516.
37. Jensen, K. B., Green, L., MacDougal-Waugh, S., and Tuerk, C., (1994) J. Mol. Biol., 234, 235-247.
38. Noble, S. A., Fisher, E. F., and Caruthers, M. H., (1984) Nucl. Acids Res. 12, 3387-3404.
39. Puglisi, J. D., Tan, R., Calnan, B. J., Frankel, A. D., and Williamson, J. R., (1992) Science, 257, 76-80.
40. Puglisi, J. D., Chen, L., Frankel, A. D., and Williamson, J. R., (1993) Proc. Natl. Acad. Sei. USA, 90, 3680-3684.
41. Tao, J., and Frankel, A. D., (1993) Proc. Natl. Acad. Sei. USA, 90, 1571-1575.
42. Battiste, J. L., Tan, R., Frankel, A. D., and Williamson, J. R., (1994) Biochemistry, 33, 2741-2747.
43. Ledere, F., Cedergren, R., and Ellington, A. D., (1994) Nature Structural Biol., 1, 293-300.
44. Tan, R., Chen, L., Buettner, J. A., Hudson, D., and Frankel, A. D., (1993) Cell, 73, 1031-1040.
45. Nagai, K., (1992) Curr. Opinion Struct. Biol., 2, 131-137.