Human replication protein A binds single-stranded DNA in two distinct complexes

Molecular and Cellular Biology

Volumn 14, Issue 6, 1994, Pages 3993-4001

  Blackwell, Leonard J ^a   Borowiec, James A ^a  

^a NEW YORK UNIVERSITY MEDICAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GLUTARALDEHYDE; PROTEIN A;

ARTICLE; BINDING SITE; CELL GROWTH; CROSS LINKING; DNA BINDING; DNA METABOLISM; DNA RECOMBINATION; DNA REPAIR; DNA REPLICATION; DNA STRAND; GENE REPLICATION; NONHUMAN; NUCLEIC ACID METABOLISM; PRIORITY JOURNAL;

EUKARYOTA;

EID: 0028333942     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.14.6.3993     Document Type: Article

References (45)

1. Adachi, Y., and U. K. Laemmli. 1992. Identification of nuclear pre-replication centers poised for DNA synthesis in Xenopus egg extracts: immunolocalization study of replication protein A. J. Cell Biol. 119:1-15.
2. Alani, E., R. Thresher, J. Griffith, and R. D. Kolodner. 1992. Characterization of DNA-binding and strand-exchange stimulation properties of y-RPA, a yeast single-strand-DNA-binding protein. J. Mol. Biol. 227:54-71.
3. Atrazhev, A., S. Zhang, and F. Grosse. 1992. Single-stranded DNA binding protein from calf thymus. Purification, properties, and stimulation of the homologous DNA-polymerase-α-primase complex. Eur. J. Biochem. 210:855-865.
4. Borowiec, J. A., F. B. Dean, P. A. Bullock, and J. Hurwitz. 1990. Binding and unwinding - how T antigen engages the SV40 origin of DNA replication. Cell 60:181-184.
5. Borowiec, J. A., and J. Hurwitz. 1988. ATP stimulates the binding of simian virus 40 (SV40) large tumor antigen to the SV40 origin of replication. Proc. Natl. Acad. Sci. USA 85:64-68.
6. Borowiec, J. A., and J. Hurwitz. 1988. Localized melting and structural changes in the SV40 origin of DNA replication induced by T antigen. EMBO J. 7:3149-3158.
7. Brill, S. J., and B. Stillman. 1989. Yeast replication factor A functions in the unwinding of the SV40 origin of replication. Nature (London) 342:92-95.
8. Brill, S. J., and B. Stillman. 1991. Replication factor-A from Saccharomyces cerevisiae is encoded by three essential genes coordinately expressed at S phase. Genes Dev. 5:1589-1600.
9. Bujalowski, W., L. B. Overman, and T. M. Lohman. 1988. Binding mode transitions of Escherichia coli single strand binding protein-single-stranded DNA complexes. Cation, anion, pH, and binding density effects. J. Biol. Chem. 263:4629-4640.
10. Bulsink, H., R. W. Wijnaendts van Resandt, B. J. Harmsen, and C. W. Hilbers. 1986. Different DNA-binding modes and cooperativities for bacteriophage M13 gene-5 protein revealed by means of fluorescence depolarisation studies. Eur. J. Biochem. 157:329-334.
11. Carpenter, M. L., and G. G. Kneale. 1991. Circular dichroism and fluorescence analysis of the interaction of Pf1 gene 5 protein with poly(dT). J. Mol. Biol. 217:681-689.
12. Chase, J. W., and K. R. Williams. 1986. Single-stranded DNA binding proteins required for DNA replication. Annu. Rev. Biochem. 55:103-136.
13. Coverley, D., M. K. Kenny, D. P. Lane, and R. D. Wood. 1992. A role for the human single-stranded DNA binding protein HSSB/ RPA in an early stage of nucleotide excision repair. Nucleic Acids Res. 20:3873-3880.
14. Coverley, D., M. K. Kenny, M. Munn, W. D. Rupp, D. P. Lane, and R. D. Wood. 1991. Requirement for the replication protein SSB in human DNA excision repair. Nature (London) 349:538-541.
15. Dean, F. B., P. Bullock, Y. Murakami, C. R. Wobbe, L. Weissbach, and J. Hurwitz. 1987. Simian virus 40 (SV40) DNA replication: SV40 large T antigen unwinds DNA containing the SV40 origin of replication. Proc. Natl. Acad. Sci. USA 84:16-20.
16. Dean, F. B., M. Dodson, H. Echols, and J. Hurwitz. 1987. ATP-dependent formation of a specialized nucleoprotein structure by simian virus 40 (SV40) large tumor antigen at the SV40 replication origin. Proc. Natl. Acad. Sci. USA 84:8981-8985.
17. Deb, S., and P. Tegtmeyer. 1987. ATP enhances the binding of simian virus 40 large T antigen to the origin of replication. J. Virol. 61:3649-3654.
18. Din, S., S. J. Brill, M. P. Fairman, and B. Stillman. 1990. Cell-cycle-regulated phosphorylation of DNA replication factor A from human and yeast cells. Genes Dev. 4:968-977.
19. Dornreiter, I., L. F. Erdile, I. U. Gilbert, D. von Winkler, T. J. Kelly, and E. Fanning. 1992. Interaction of DNA polymerase α-primase with cellular replication protein A and SV40 T antigen. EMBO J. 11:769-776.
20. Dutta, A., J. M. Ruppert, J. C. Aster, and E. Winchester. 1993. Inhibition of DNA replication factor RPA by p53. Nature (London) 365:79-82.
21. Dutta, A., and B. Stillman. 1992. cdc2 family kinases phosphorylate a human cell DNA replication factor, RPA, and activate DNA replication. EMBO J. 11:2189-2199.
22. Erdile, L. F., W. D. Heyer, R. Kolodner, and T. J. Kelly. 1991. Characterization of a cDNA encoding the 70-kDa single-stranded DNA-binding subunit of human replication protein A and the role of the protein in DNA replication. J. Biol. Chem. 266:12090-12098.
23. Erdile, L. F., M. S. Wold, and T. J. Kelly. 1990. The primary structure of the 32-kDa subunit of human replication protein A. J. Biol. Chem. 265:3177-3182.
24. Fairman, M. P., and B. Stillman. 1988. Cellular factors required for multiple stages of SV40 DNA replication in vitro. EMBO J. 7:1211-1218.
25. Fotedar, R., and J. M. Roberts. 1992. Cell cycle regulated phosphorylation of RPA-32 occurs within the replication initiation complex. EMBO J. 11:2177-2187.
26. Georgaki, A., B. Strack, V. Podust, and U. Hübscher. 1992. DNA unwinding activity of replication protein A. FEBS Lett. 308:240-244.
27. He, Z., B. T. Brinton, J. Greenblatt, J. A. Hassell, and C. J. Ingles. 1993. The transactivator proteins VP16 and GAL4 bind replication factor A. Cell 73:1223-1232.
28. Heyer, W. D., M. R. S. Rao, L. Erdile, T. Kelly, and R. D. Kolodner. 1990. An essential Saccharomyces cerevisiae single-stranded DNA binding protein is homologous to the large subunit of human RP-A. EMBO J. 9:2321-2329.
29. Kansy, J. W., B. A. Clack, and D. M. Gray. 1986. The binding of fd gene 5 protein to polydeoxynucleotides: evidence from CD measurements for two binding modes. J. Biomol. Struct. Dynam. 3:1079-1110.
30. Kelly, R. C., D. E. Jensen, and P. H. von Hippel. 1976. DNA "melting" proteins. IV. Fluorescence measurements of binding parameters for bacteriophage T4 gene 32-protein to mono-, oligo-, and polynucleotides. J. Biol. Chem. 251:7240-7250.
31. Kenny, M. K., S.-H. Lee, and J. Hurwitz. 1989. Multiple functions of human single-stranded-DNA binding protein in simian virus 40 DNA replication: single-strand stabilization and stimulation of DNA polymerases α and δ. Proc. Natl. Acad. Sci. USA 86:9757-9761.
32. Kenny, M. K., U. Schlegel, H. Furneaux, and J. Hurwitz. 1990. The role of human single-stranded DNA binding protein and its individual subunits in simian virus 40 DNA replication. J. Biol. Chem. 265:7693-7700.
33. Kim, C., R. O. Snyder, and M. S. Wold. 1992. Binding properties of replication protein A from human and yeast cells. Mol. Cell. Biol. 12:3050-3059.
34. Kowalczykowski, S. C., D. G. Bear, and P. H. von Hippel. 1981. Single-stranded DNA binding proteins, p. 373-444. In P. D. Boyer (ed.), The enzymes, vol. 14. Academic Press, Orlando, Fla.
35. Li, R., and M. Botchan. 1993. The acidic transcriptional activation domains of VP16 and p53 bind the cellular replication protein A and stimulate in vitro BPV-1 DNA replication. Cell 73:1207-1221.
36. Mastrangelo, I. A., P. V. C. Hough, J. S. Wall, M. Dodson, F. B. Dean, and J. Hurwitz. 1989. ATP-dependent assembly of double hexamers of SV40 T antigen at the viral origin of DNA replication. Nature (London) 338:658-662.
37. Parsons, R., M. E. Anderson, and P. Tegtmeyer. 1990. Three domains in the simian virus 40 core origin orchestrate the binding, melting, and DNA helicase activities of T antigen. J. Virol. 64:509-518.
38. Rodriguez, A. T., G. Colmenarejo, and F. Montero. 1991. Thermal denaturation profiles of deoxypolynucleotide-destabilizer ligand complexes: semiempirical studies. Arch. Biochem. Biophys. 290: 133-142.
39. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
40. Siegel, L. M., and K. J. Monty. 1966. Determination of molecular weights and frictional ratios of proteins in impure systems by use of gel filtration and density gradient centrifugation. Application to crude preparations of sulfite and hydroxylamine reductases. Biochim. Biophys. Acta 112:346-362.
41. Umbricht, C. B., L. F. Erdile, E. W. Jabs, and T. J. Kelly. 1993. Cloning, overexpression, and genomic mapping of the 14-kDa subunit of human replication protein A. J. Biol. Chem. 268:6131-6138.
42. Wobbe, C. R., L. Weissbach, J. A. Borowiec, F. B. Dean, Y. Murakami, P. Bullock, and J. Hurwitz. 1987. Replication of simian virus 40 origin-containing DNA in vitro with purified proteins. Proc. Natl. Acad. Sci. USA 84:1834-1838.
43. Wold, M. S., and T. Kelly. 1988. Purification and characterization of replication protein A, a cellular protein required for in vitro replication of simian virus 40 DNA. Proc. Natl. Acad. Sci. USA 85:2523-2527.
44. Wold, M. S., J. J. Li, and T. J. Kelly. 1987. Initiation of simian virus 40 DNA replication in vitro: large-tumor-antigen- and origin-dependent unwinding of the template. Proc. Natl. Acad. Sci. USA 84:3643-3647.
45. Wold, M. S., D. H. Weinberg, D. M. Virshup, J. J. Li, and T. J. Kelly. 1989. Identification of cellular proteins required for simian virus 40 DNA replication. J. Biol. Chem. 264:2801-2809.