Involvement of a GNRA tetraloop in long-range RNA tertiary interactions

Journal of Molecular Biology

Volumn 236, Issue 5, 1994, Pages 1271-1276

  Jaeger, Luc ^a,b   Michel, François ^a   Westhof, Eric ^b  

^a CENTRE DE GÉNÉTIQUE MOLÉCULAIRE   (France)

^b INSTITUT DE BIOLOGIE MOLÉCULAIRE ET CELLULAIRE   (France)

Author keywords

GNRA tetraloop; group I introns; RNA modelling; RNA structure; RNA tertiary motif

Indexed keywords

RIBOZYME;

INTRON; PRIORITY JOURNAL; RNA STRUCTURE; SHORT SURVEY;

EID: 0028294458     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/0022-2836(94)90055-8     Document Type: Article

References (15)

1. Thermodynamic parameters for loop formation in RNA and DNA hairpin tetraloops
2. A thermodynamic study of unusually stable RNA and DNA hairpins
3. Deletion-tolerance and trans-splicing of the bacteriophage T4 td intron. Analysis of the P6-L6a region
4. Structural features that give rise to the unusual stability of RNA hairpins containing GNRA loops
5. Monitoring of the co-operative unfolding of the sun Y group I intron of bacteriophage T4. The active form of the sun Y ribozyme is stabilized by multiple interactions with 3′ terminal intron components
6. Modelling of the threedimensional architecture of group I catalytic introns based on comparative sequence analysis
7. Activation of the catalytic core of a group I intron by a remote 3′ splice junction
8. An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme
9. Pseudoknots: a new motif in the RNA game
10. Context dependence of hydrogen bond free energy revealed by substitutions in an RNA hairpin
11. Aromatic-aromatic interactions and protein stability. Investigation by double-mutant cycles
12. CUUCGG hairpins: Extraordinarily stable RNA secondary structures associated with various biochemical processes
13. Computer modeling from solution data of spinach chloroplast and of Xenopus laevis somatic and oocyte 5 S rRNAs
14. Architecture of ribosomal RNA: Constraints on the sequence of ‘tetra-loops’