RNA pseudoknots

Current Opinion in Structural Biology

Volumn 4, Issue 3, 1994, Pages 337-344

  Pleij, Cornelis W A ^a  

^a LEIDEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

REPRESSOR PROTEIN; RIBOSOME PROTEIN; RIBOSOME RNA; RIBOZYME; SINGLE STRANDED DNA; TRANSFER RNA; VIRUS RNA;

BASE PAIRING; GENE EXPRESSION; HEPATITIS DELTA VIRUS; NONHUMAN; NUCLEAR MAGNETIC RESONANCE; PICORNAVIRUS; PLANT VIRUS; PRIORITY JOURNAL; PROTEIN BINDING; REVIEW; RIBOSOME; RNA CLEAVAGE; RNA REPLICATION; RNA SPLICING; RNA STRUCTURE; RNA TRANSLATION; STOP CODON; VIRUS REPLICATION; X RAY DIFFRACTION;

EID: 0028277765     PISSN: 0959440X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0959-440X(94)90101-5     Document Type: Article

References (45)

1. RNA Pseudoknots
2. RNA Pseudoknots
3. RNA Structural Elements and RNA Function
4. Structural and Functional Aspects of RNA Pseudoknots
5. Conformation of an RNA Pscudoknot
6. Nucleoside Triples from the Group L Intron
7. Crystallisation of Ribozymcs and Small RNA Motifs by a Sparse Matrix Approach
8. Interlocked Circle Formation by Group L Introns: Structural Requirements and Mechanism
9. Tight Single-Stranded DNA Knots
10. Turnip Yellow Mosaic Virus RNAs with Anticodon Loop Substitutions that Result in Decreased Valylation Fail to Replicate Efficiently
11. The 3′ Promoter Region Involved in RNA Synthesis Directed by the Turnip Yellow Mosaic Virus Genome in vitro
12. Solution Structure of the 3′ End of Brome Mosaic Virus Gcnomic RNAs. Conformational Mimicry with Canonical tRNAs
13. Second-site Suppressor Mutations Assist in Studying the Function of the 3′ Noncoding Rcgion of Turnip Yellow Mosaic Virus RNA
14. A Phylogenetically Conserved Sequence within Viral 3′ Untranslated RNA Pseudoknots Regulates Translation
15. Contributions of the Brome Mosaic Virus RNA-3 3′ Nontranslated Region to Replication and Translation
16. Sequence and Structural Elements that Contribute to Efficient Encephalomyo carditis Viral RNA Translation
17. Conserved Tertiary Structural Elements in the 5′ Non-Translated Region of Cardiovirus, Aphtovirus and Hepatitis A Virus
18. Conserved Tertiary Structure Elements in the 5′ Untranslated Region of Human Enteroviruses and Rhinoviruses
19. Biochemical and Genetic Evidence for a Pseudoknot Structure at the 3′ Terminus of the Poliovirus Gcnome and its Role in Viral RNA Amplification
20. Towards Identification of Cis-Acting Elements Involved in the Replication of Enterovirus and Rhinovirus RNAs: a Proposal for the Existence of tRNA-Like Terminal Structures
21. Comparative Studies of RNA: Inferring Higher Order Structure from Patterns of Sequence Variation
22. A Functional Pseudoknot in 16S Ribosomal RNA
23. Formation of the the central pseudoknot in 16S rRNA is essential for initiation of translation
24. A Cold-Sensitive Mutation in 16S rRNA Provides Evidence for Helical Switching in Ribosome Assembly
25. Tertiary Structure of Ribosomal RNA
26. The Phylogenetically Conserved Doublet Tertiary Interaction in Domain III of the Large Subunit rRNA is Cru cial for Ribosomal Protein Binding
27. Allostcric Mechanism for Translational Repression in the Escherichia toll α Operon
28. Ribosome Initiation Complex Formation with the Pseudoknotted a Operon Messenger RNA
29. Ribosomal Protein S15 from Escherichia coli Modulates its Own Translation by Trapping the Ribosome on the mRNA Initiation Site
30. Autogenous Regulatory Site on the Bacteriophage T4 Gene 32 Messenger RNA
31. Translational Repression by the Bacteriophage T4 Gene 32 Protein Involves Specific Recognition of an RNA Pseudoknot Structure
32. Characterization of an Efficient Coronavirus Ribosomal Frameshifting Signal: Requirement for an RNA Pseudoknot
33. Alternative Readings of the Genetic Code
34. An ‘Elaborated’ Pseudoknot is Required for High Frequency Frameshifting During Translation of HCV 229E Polymerase mRNA
35. Ribosomal Movement Impeded at a Pseudoknot Required for Frameshifting
36. Ribosomal Pausing During Translation of an RNA Pseudoknot
37. Differential Response to Frameshift Signals in Eukaryotic and Prokaryotic Translational Systems
38. Structural Requirements for Efficient Frameshifting in the Synthesis of the Putative Viral RNA-dependent RNA Polymerase of Potato Leafroll Virus
39. Ribosomal Frameshifting in Plants a Novel Signal Directs the -1 Frameshift in the Synthesis of the Putative Viral Replicase of Potato Leafroll Lutcovirus
40. Assessment of Disparate Structural Features in Three Models of the Hepatitis Delta Virus Ri- bozyme
41. Chemical Probing Studies of Variants of the Genomic Hepatitis Delta Virus Ri- bozyme by Primer Extension Analysis
42. Systematic Substitution of Individual Bases in Two Important Single-Stranded Regions of the HDV Ri bozymc for Evaluation of the Role of Specific Bases
43. Mutagenesis Analysis of a Hepatitis Delta Virus Genomic Ribozyme
44. RNA Pseudoknots that Inhibit Immunodeficiency Virus Type 1 Reverse Transcriptase
45. RNA: The Shape of Things to Come