A method for constructing radiation hybrid maps of whole genomes

Nature Genetics

Volumn 7, Issue 1, 1994, Pages 22-28

  Walter, Michael A ^a,c   Spillett, Dominique J ^a   Thomas, Philip ^a   Weissenbach, Jean ^b   Goodfellow, Peter N ^a  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b GÉNÉTHON   (France)

^c UNIVERSITY OF ALBERTA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ANIMAL EXPERIMENT; ANIMAL MODEL; ANIMAL TISSUE; ARTICLE; CHROMOSOME ANALYSIS; CHROMOSOME STRUCTURE; COMPUTER ANALYSIS; DEER; DENSITY GRADIENT CENTRIFUGATION; DNA DETERMINATION; FLOW CYTOMETRY; GENE ISOLATION; GENE MAPPING; GENE TRANSFER; GENOME; HYBRIDIZATION; KARYOTYPE; MOLECULAR CLONING; NONHUMAN; PRIORITY JOURNAL;

ANIMALS; BASE SEQUENCE; CELL FUSION; CELL LINE; CHO CELLS; CHROMOSOME MAPPING; CHROMOSOMES, HUMAN; CHROMOSOMES, HUMAN, PAIR 14; CRICETINAE; CRICETULUS; DIPLOIDY; FIBROBLASTS; GENETIC MARKERS; GENOME, HUMAN; HUMANS; HYBRID CELLS;

EID: 0028141719     PISSN: 10614036     EISSN: 15461718     Source Type: Journal    
DOI: 10.1038/ng0594-22     Document Type: Article

References (34)

1. Walter, M.A. & Goodfellow, P.N. Radiation hybrids: irradiation and fusion gene transfer. Trends Genet. 9, 352-356 (1993).
2. Goss, S.J. & Harris, H. New method for mapping genes in human chromosomes. Nature 255, 680-684 (1975).
3. Willard, H.F., Goss, S.J., Holmes, M.T. & Munroe, D.L. Regional localization of the phosphoglycerate kinase gene and pseudogene on the human X chromosome and assignment of a related DNA sequence to chromosome 19. Hum. Genet. 71, 138-143 (1985).
4. Cox, D.R., Burmeister, M., Price, E.R., Kim, S. & Myers, R.M. Radiation hybrid mapping: a somatic cell genetic method for constructing high-resolution maps of mammalian chromosomes. Science 250, 245-250 (1990).
5. Barrett, J.H. Genetic mapping based on radiation hybrid data. Genomics13, 95-103 (1992).
6. Wigler, M., Pellicer, A., Silverstein, S. & Axel, R. Biochemical transfer of single-copy eucaryotic genes using total cellular DNA as donor. Cell 14, 725-731 (1978).
7. Benham, F. et al. A method for generating hybrids containing nonselected fragments of human chromosomes. Genomics 4, 509-517 (1989).
8. Warrington, J.A. et al. A radiation hybrid map of 18 growth-factor, growth-factor receptor, hormone receptor, or neurotransmitter receptor genes on the distal region of the long arm of chromosome-5. Genomics 13, 803-808 (1992).
9. Siden, T.S., Kumlien, J., Schwartz, C.E. & Rohme, D. Radiation fusion hybrids for human chromosomes 3 and X generated at various irradiation doses. Somat. Cell. molec. Genet. 18, 33-44 (1992).
10. Boehnke, M., Lange, K. & Cox, D.R. Statistical methods for multipoint radiation hybrid mapping. Am. J. hum. Genet. 49, 1174-1188 (1991).
11. NIH/CEPH Collaborative Mapping Group. A comprehensive genetic-linkage map of the human genome. Science 258, 67-86 (1992).
12. Weissenbach, J. et al. A 2nd-generatlon linkage map of the human genome. Nature 359, 794-801 (1992).
13. Cox, D.W. Report of the first International workshop on human chromosome 14 mapping 1993. Cytogenet. Cell Genet. 66, 2-9 (1994).
14. Goodfellow, P.J., Povey, S., Nevanlinna, H.A. & Goodfellow, P.N. Generation of a panel of somatic cell hybrids containing unselected fragments of human chromosome 10 by X-ray irradiation and cell fusion: application to Isolating the MEN2A region in hybrid cells. Somat. Cell. molec. Genet. 16, 163-171 (1990).
15. Ceccherini, I. et al. Construction of a map of chromosome 16 by using radiation hybrids. Proc. natn. Acad. Sci. U.S.A. 89, 104-108 (1992).
16. Sefton, L., Arnaud, D., Goodfellow, P.N., Simmler, M.C. & Avner, P. Characterization of the central region containing the X-inactivation center and terminal region of the mouse X chromosome using irradiation and fusion gene transfer hybrids. Mamm. Genome 2, 21-31 (1992).
17. Gorski, J.L., Boehnke, M., Reyner, E.L. & Burright, E.N. A radiation hybrid map of the proximal short arm of the human x-chromosome spanning incontinentia-pigmenti-1 (ip1) translocation breakpoints. Genomics 14, 657-665 (1992).
18. Lawrence, S., Morton, N.E. & Cox, D.R. Radiation hybrid mapping. Proc. natn. Acad. Sci. U.S.A. 88, 7477-7480 (1991).
19. Westerveld, A., Visser, R.P.L.S., Khan, P.M. & Bootsma, D. Loss of human genetic markers in man-Chinese hamster ovary cells. Nature New Biol. 234, 20-22 (1971).
20. Cotter, F.C., Hampton, G.M., Nasipuri, S., Bodmer, W. & Young, B. Rapid isolation of human chromosome-specific DNA probes from a somatic cell hybrid. Genomics 7, 257-263 (1990).
21. Orita, M., Sekiya, T. & Hayashi, K. DNA sequence polymorphisms in Alu repeats. Genomics 8, 271-278 (1990).
22. Powell, S.J., et al. Human bradykinin b2-receptor-nucleotide-sequence analysis and assignment to chromosome-14. Genomics 15, 435-438 (1993).
23. Polymeropoulos, M.H., Xiao, H., Rath, D.S. & Merril, C.R. Dinucleotide repeat polymorphism at the human cardiac beta-myosin gene. Nucl. Acids Res. 19, 4019 (1991).
24. Byth, B.C., Meijers, J.C.M. & Cox, D.W. A (ca)n repeat polymorphism in the protein-c inhibitor (pci) gene. Hum. molec. Genet. 2, 1752-1752 (1993).
25. Byth, B.C. & Cox, D.W. A (ca)n repeat polymorphism at the 5' end of the alpha-1-antitrypsin gene (pi). Hum. molec. Genet. 2, 1752-1752 (1993).
26. Yamada, Y. et al. Human somatostatin receptor genes-localization to human chromosome-14, chromosome-17, and chromosome-22 and identification of simple tandem repeat polymorphisms. Genomics 15, 449-452 (1993).
27. Weber, J.L., Kwitek, A.E. & May, P.E. Dinucleotide repeat polymorphism at the D14S34 locus. Nucl. Acids Res. 18, 4638 (1990).
28. Jordan, S.A., McWilliam, P., O'Briain, D.S. & Humphries, P. Dinucleotide repeat polymorphism attheD14S42 locus. Nucl. Acids Res. 19, 1171 (1991).
29. Sharma, V., Smith, L., Allen, L., Magenis, R.E. & Litt, M. Dinucleotide repeat polymorphism at the D14S43 locus. Nucl. Acids Res. 19, 1722 (1991).
30. Luty, J.A. & Litt, M. Dinucleotide repeat polymorphism at the D14S45 locus. Nucl. Acids Res. 19, 4308 (1991).
31. Wang, Z. & Weber, J.L. Continuous linkage map of human chromosome 14 short tandem repeat polymorphisms. Genomics 13, 532-536 (1992).
32. Hudson, T.J. et al. Isolation and chromosomal assignment of 100 highly Informative human simple sequence repeat polymorphisms. Genomics13, 622-629 (1992).
33. Polymeropoulos, M.H., Ziao, H., Ide, S.E. & Merril, C.R. Dinulceotide repaet polymorphism at the D14s99E locus. Hum. molec. Genet. 2, 490 (1993).
34. Zhao, B. et al. The human gene for apurinic/apyrimldinic endonuclease (HAP1): sequence and localization to chromosome 14 band q12. Nucl. Acids Res. 20, 4097-4098 (1992).