A yac contig spanning the nevoid basal cell carcinoma syndrome, fanconi anaemia group c, and xeroderma pigmentosum group a loci on chromosome 9q

Genomics

Volumn 23, Issue 1, 1994, Pages 23-29

  Morris, Deborah J ^a   Reis, André ^a  

^a FREIE UNIVERSITÄT BERLIN   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0028049612     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1994.1454     Document Type: Article

References (45)

1. Albertsen, H. M., Abderrahim, H., Cann, H. M., Dausset, J., Le Pas-lier, D., and Cohen, D. (1990). Construction and characterization of a yeast artificial chromosome library containing seven haploid human genome equivalents. Proc. Natl. Acad. Sci. USA 87: 4256-4260.
2. Anand, R., Villasente, A., and Tyler-Smith, C. (1990). A 3.5 genome equivalent multi access YAC library: Construction, characterisation, screening and storage. Nucleic Acids Res. 17: 4325-4333.
3. Banfi, S., Chung, M.-Y., Kwiatkowski, T. J., Ranum, L. P. W., McCall, A. E., Chinault, A. C., Orr, H. T., and Zoghbi, H. Y. (1993). Mapping and cloning of the critical region for the spinocerebellar ataxia type 1 gene (SCA1) in a yeast artificial chromosome contig spanning 1.3 Mb. Genomics 18: 627-635.
4. Bates, G. P., Valdes, J., Hummerich, H., Baxendale, S., Le Paslier, D. L., Monaco, A. P., Tagle, D., MacDonald, M. E., Altherr, M., Ross, M., Brownstein, B. H., Bentley, D., Wasmuth, J. J., Gusella, J. F., Cohen, D., Collins, F., and Lehrach, H. (1992). Characterization of a yeast artificial chromosome contig spanning the Huntington's disease gene candidate region. Nature Genet. 1: 180-187.
5. Bonifas, J. M., Bare, J. W., Kerschmann, R. L., Master, S. P., and Epstein, E. H., Jr. (1994). Parental origin of chromosome 9q22.3-q31 lost in basal cell carcinomas from basal cell nevus syndrome patients. Hum. Mol. Genet. 3: 447-448.
6. Bootsma, D., and Hoeijmakers, J. H. J. (1991). The genetic basis of xeroderma pigmentosum. Ann. Genet. 34: 143-150.
7. Chaganti, R. S. K., and Houldsworth, J. (1991). Fanconi anemia: A pleiotropic mutation with multiple cellular and developmental abnormalities. Ann. Genet. 34: 206-211.
8. Cohen, D., Chumakov, I., and Weissenbach, J. (1993). A first-generation physical map of the human genome. Nature 366: 698-701.
9. Dean, M., Chidambaram, A., Gailani, M., Stewart, C., Gerrad, B., Chumakov, I., Bale, S. J., Goldstein, A., and Bale, A. (1993). Genetic analysis of the nevoid basal cell carcinoma syndrome (NBCCS) locus. Am. J. Hum. Genet. 53(Suppl): A285.
10. Digweed, M. (1993). Human genetic instability syndromes: Single gene defects with increased risk of cancer. Toxicol. Lett. 67: 259-281.
11. Evans, D. G. R., Ladusans, E. J., Rimmer, S., Burnell, L. D., Thakker, N., and Famdon, P. A. (1993). Complications of the naevoid basal cell carcinoma syndrome: Results of a population based study. J. Med. Genet. 30: 460-464.
12. Evdokiou, A., Webb, G. C., Peters, G. B., Dobrovic, A., O'Keefe, D. S., Forbes, I. J., and Cowled, P. A. (1993). Localization of the human growth arrest-specific gene (GASl) to chromosome bands 9q21.3-q22, a region frequently deleted in myeloid malignancies. Genomics 18: 731-733.
13. Famdon, P. A., Evans, D. G. R., Del Mastro, R. G., and Kilpatrick, M. W. (1992). Location of gene for Gorlin syndrome. Lancet 339: 581-582.
14. Farndon, P. A., Morris, D. J., Hardy, C., McConville, C. M., Weissenbach, J., Kilpatrick, M. W., and Reis, A. (1994). Analysis of 133 meioses places the genes for nevoid basal cell carcinoma (Gorlin) syndrome and Fanconi anaemia group C in a 2.6-cM interval and contributes to the fine map of 9q22.3. Genomics, in press.
15. Feinberg, A. P., and Vogelstein, B. (1984). A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 137: 266-267.
16. Gailani, M. R., Bale, S. J., Leffell, D. J., DiGiovanna, J. J., Peck, G. L., Poliak, S., Drumm, M. A., Pastakia, B., McBride, O. W., Kase, R., Greene, M., Mulvihill, J. J., and Bale, A. E. (1992). Developmental defects in Gorlin syndrome related to a putative tumor suppressor gene on chromosome 9. Cell 69: 111-117.
17. Gailani, M., Dean, M., Myers, J. C., Chidambaram, A., Leffell, D., Siu, V., and Bale, A. (1993). Evaluation of COL15A1 as a candidate gene for Gorlin syndrome. Am. J. Hum. Genet. 53(Suppl.): 31A.
18. Gibson, R. A., Buchwald, M., Roberts, R. G., and Mathew, C. G. (1993). Characterisation of the exon structure of the Fanconi anaemia group C gene by vectorette PCR. Hum. Mol. Genet. 2: 35-38.
19. Goldstein, A. M., Bale, S. J., Peck, G. L., and Giovanna, J. J. (1993). Sun exposure and basal cell carcinomas in the nevoid basal cell carcinoma syndrome. J. Am. Acad. Dermatol. 29: 34-41.
20. Gorlin, R. J. (1987). Nevoid basal-cell carcinoma syndrome. Medicine 66: 98-113.
21. Goudie, D. R., Yuille, M. A. R., Barroso, I., Affara, N. A., and Fer-guson-Smith, M. A. (1993a). Mapping of the gene for multiple self-healing squamous epithelioma by haplotype analysis in families with common ancestry. Cytogenet. Cell Genet. 64: 114A.
22. Goudie, D. R., Yuille, M. A. R., Leversha, M. A., Furlong, R. A., Carter, N. P., Lush, M. J., Affara, N. A., and Ferguson-Smith, M. A. (1993b). Multiple self-healing squamous epitheliomata (ESS1) mapped to chromosome 9q22-q31 in families with common ancestry. Nature Genet. 3: 165-169.
23. Green, E. D., and Olson, M. V. (1990). Systematic screening of yeast artificial-chromosome libraries by use of the polymerase chain reaction. Proc. Natl. Acad. Sci. USA 87: 1213-1217.
24. Gyapay, G., Morisette, J., Vignal, A., Dib, C., Fizames, C., Millas-seau, P., Marc, S., Bemadi, G., Lathrop, M., and Weissenbach, J. (1994). The 1993-94 Genethon human genetic linkage map. Nature Genet. 7: 246-339.
25. Henning, K. A., Schultz, R. A., Sekhon, G. S., and Friedberg, E. C. (1990). Gene complementing xeroderma pigmentosum group A cells maps to distal human chromosome 9q. Somatic Cell Mol. Genet. 16: 395-400.
26. Huebner, K., Cannizzaro, L. A., Wang Jabs, E., Kivirikko, S., Man-zone, H., Pihlajaniemi, T., and Myers, J. C. (1992). Chromosomal assignment of a gene encoding a new collagen type (COL15A1) to 9q21-q22. Genomics 14: 220-224.
27. Jones, C., and Kao, F. T. (1984). Regional mapping of the folylpolyglu-tamate synthetase gene (FPGS) to 9cen-q34. Cytogenet. Cell Genet. 37: 499.
28. Kwiatkowski, D. J., Armour, J., Bale, A. E., Fountain, J. W., Goudie, D., Haines, J. L., Knowles, M. A., Pilz, A., Slaugenhaupt, S., and Povey, S. (1993a). Report on the Second International Workshop on Human Chromosome 9. Cytogenet. Cell Genet. 64: 94-121.
29. Kwiatkowski, D. J., Dib, C., Slaugenhaupt, S. A., Povey, S., Gusella, J. F., and Haines, J. L. (1993b). An index marker map of chromosome 9 provides strong evidence for positive interference. Am. J. Hum. Genet. 53: 1279-1288.
30. Myers, J. C., Kivirikko, S., Gordon, M. K., Dion, A. S., and Pihlajaniemi, T. (1992). Identification of a previously unknown human collagen chain, al(XV), characterized by extensive interruptions in the triple-helical region. Proc. Natl. Acad. Sci. USA 89: 10144-10148.
31. NIH/CEPH Collaborative Mapping Group (1992). A comprehensive genetic linkage map of the human genome. Science 258: 67-86.
32. Reis, A., Küster, W., Gebel, E., Fuhrmann, W., Groth, W., Kuklik, M., Wegner, R. D., Linss, G., Hamm, H., Wolff, G., Gustafson, G., Bürger, J., and Neitzel, H. (1992). Localisation of gene for the naevoid basal-cell carcinoma syndrome. Lancet 339: 617.
33. Satokata, I., Tanaka, K., and Okada, Y. (1992). Molecular basis of group A xeroderma pigmentosum: A missense mutation and two deletions located in a zinc finger consensus sequence of the XPAC gene. Hum. Genet. 88: 603-607.
34. Schmickel, R. D. (1986). Contiguous gene syndromes: A component of recognizable syndromes. J. Pediatr. 109: 231-241.
35. Sherman, F., Fink, G. R., and Hicks, J. B. (1986). "Methods in Yeast Genetics' Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
36. Strathdee, C. A., Duncan, A., and Buchwald, M. (1992). Evidence for at least four Fanconi anaemia genes including FACC on chromosome 9. Nature Genet. 1: 196-198.
37. Tanaka, K., Miura, N., Satokata, I., Miyamoto, I., Yoshida, M. C., Satoh, Y., Kondo, S., Yasui, A., Okayama, H., and Okada, Y. (1990). Analysis of a human DNA excision repair gene involved in group A xeroderma pigmentosum and containing a zinc-finger domain. Nature 348: 73-76.
38. Webb, G. C., Cowled, P. A., Evdokiou, A., Ford, J. H., and Forbes, I. J. (1992). Assignment, by in situ hybridization, of the growth arrest-specific gene, Gas-1, to mouse chromosome 13, bands B3-C2. Genomics 14: 548-549.
39. Weissenbach, J., Gyapay, G., Dib, C., Vignal, A., Morissette, J., Mil-lasseau, P., Vaysseix, G., and Lathrop, M. (1992). A second-genera-tion linkage map of the human genome. Nature 359: 794-801.
40. Wevrick, R., Barker, J. E., Nadeau, J. H., Szpirer, C., and Buchwald, M. (1993a). Mapping of the murine and rat Facc genes and assessment of flexed-tail as a candidate mouse homolog of Fanconi anemia group C. Mamm. Genome 4: 440-444.
41. Wevrick, R., Clarke, C. A., and Buchwald, M. (1993b). Cloning and analysis of the murine Fanconi anemia group C cDNA. Hum. Mol. Genet. 2: 655-662.
42. Xie, Y.-G., Han, F-Y., Peyrad, M., Ruttledge, M. H., Fransson, I., DeJong, P., Collins, J., Dunham, I., Nordenskjold, M., and Duman-ski, J. P. (1993). Cloning of a novel, anonymous gene from a mega-base-range YAC and cosmid contig in the neurofibromatosis type 2/meningioma region of human chromosome 22ql2. Hum. Mol. Genet. 2: 1361-1368.
43. Yuille, M. A. R., Leversha, M., Goudie, D. R., Affara, N. A., and Ferguson-Smith, M. A. (1991). Microsatellite polymorphism at the D9S12 locus. Nucleic Acids Res. 19: 5097.
44. Yuille, M. A. R., Goudie, D. R., Affara, N. A., and Ferguson-Smith, M. A. (1992). Additional polymorphism at a chromosome 9 reference locus. Hum. Mol. Genet. 1: 351.
45. Ziegler, A., and Volz, A. (1992). Rotating field gel electrophoresis (ROFE). In "Methods in Molecular Biology: Pulsed-Field Gel Electrophoresis" (M. Burmeister and L. Ulanovsky, Eds.), Vol. 12, pp.63-72, The Humana Press, Totowa, NJ.