Statistical analysis of nucleotide sequences of the hemagglutinin gene of human influenza A viruses

Proceedings of the National Academy of Sciences of the United States of America

Volumn 91, Issue 18, 1994, Pages 8388-8392

  Ina, Yasuo ^a   Gojobori, Takashi ^a  

^a NATIONAL INSTITUTE OF GENETICS   (Japan)

Author keywords

neutral theory of molecular evolution; positive selection; synonymous and nonsynonymous substitutions

Indexed keywords

ANTIGENICITY; ARTICLE; EVOLUTION; GENETIC SELECTION; INFLUENZA VIRUS A; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; STATISTICAL ANALYSIS; VIRAL GENETICS; VIRUS GENE;

INFLUENZA A VIRUS; INFLUENZA VIRUS;

EID: 0028048620     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.91.18.8388     Document Type: Article

References (39)

1. Gojobori, T., Moriyama, E. N. & Kimura, M. (1990) Proc. Natl. Acad. Sci. USA 87, 10015-10018.
2. Fitch, W. M., Leiter, J. M. E., Li, X. & Palese, P. (1991) Proc. Natl. Acad. Sci. USA 88, 4270-4274.
3. Sugita, S., Yoshioka, Y., Itamura, S., Kanegae, Y., Oguchi, K., Gojobori, T., Nerome, K. & Oya, A. (1991) J. Mol. Evol. 32, 16-23.
4. Takahata, N. (1990) in Population Biology of Genes and Molecules, eds. Takahata, N. & Crow, J. F. (Baifukan, Tokyo), pp. 267-286.
5. Kimura, M. (1968) Nature (London) 217, 624-626.
6. Kimura, M. (1983) The Neutral Theory of Molecular Evolution (Cambridge Univ. Press, Cambridge, UK).
7. Kimura, M. & Ohta, T. (1974) Proc. Natl. Acad. Sci. USA 71, 2848-2852.
8. Kimura, M. (1977) Nature (London) 267, 275-276.
9. Felsenstein, J. (1978) Syst. Zool. 27, 401-410.
10. Saitou, N. & Imanishi, T. (1989) Mol. Biol. Evol. 6, 514-525.
11. Nei, M. & Gojobori, T. (1986) Mol. Biol. Evol. 3, 418-426.
12. Miyata, T. & Yasunaga, T. (1980) J. Mol. Evol. 16, 23-36.
13. Li, W.-H., Wu, C.-I. & Luo, C.-C. (1985) Mol. Biol. Evol. 2, 150-174.
14. Pamilo, P. & Bianchi, N. O. (1993) Mol. Biol. Evol. 10, 271-281.
15. Li, W.-H. (1993) J. Mol. Evol. 36, 96-99.
16. Kimura, M. (1980) J. Mol. Evol. 16, 111-120.
17. Caton, A., Brownlee, C. G., Yewdell, J. W. & Gerhard, W. (1982) Cell 31, 417-427.
18. Nei, M. & Li, W. -H. (1979) Proc. Natl. Acad. Sci. USA 76, 5269-5273.
19. Hiti, A. L., Davis, A. R. & Nayak, D. P. (1981) Virology 111, 113-124.
20. Winter, G., Fields, S. & Brownlee, G. G. (1981) Nature (London) 292, 72-75.
21. Nakajima, S., Nakajima, K. & Kendal, A. P. (1983) Virology 131, 116-127.
22. Raymond, F. L., Caton, A. J., Cox, N. J., Kendal, A. P. & Brownlee, G. G. (1983) Nucleic Acids Res. 11, 7191-7203.
23. Beklemishev, A. B., Blinov, V. M., Vassilendo, S. K., Golovin, S. Y., Gutorov, V. V., Karginov, V. A., Mamaev, L. V., Mikryukov, N. N., Netesov, S. V., Petrenko, V. A., Petrov, N. A. & Sandakhchiev, L. S. (1984) Bioorg. Khim. 10, 1535-1543.
24. Beklemishev, A. B., Blynov, V. M., Vassilenko, S. K., Golovin, S. Y., Karginov, V. A. & Mamayev, L. V. (1986) Bioorg. Khim. 12, 375-381.
25. Concannon, P., Cummings, I. W. & Salser, W. A. (1984) J. Virol. 49, 276-278.
26. Robertson, J. S. (1987) J. Gen. Virol. 68, 1205-1208.
27. Cox, N. J., Black, R. A. & Kendal, A. P. (1989) J. Gen. Virol. 70, 299-313.
28. Rajakumar, A., Swierkosz, E. M. & Schulze, I. T. (1990) Proc. Natl. Acad. Sci. USA 87, 4154-4158.
29. Rocha, E., Cox, N. J., Black, R. A., Harmon, M. W., Harrison, C. J. & Kendal, A. P. (1991) J. Virol. 65, 2340-2350.
30. Hayashida, H., Toh, H., Kikuno, R. & Miyata, T. (1985) Mol. Biol. Evol. 2, 289-303.
31. Saitou, N. & Nei, M. (1986) Mol. Biol. Evol. 3, 57-74.
32. Nei, M. & Jin, L. (1989) Mol. Biol. Evol. 6, 240-300.
33. Jukes, T. H. & Cantor, C. R. (1969) in Mammalian Protein Metabolism, ed. Munro, H. N. (Academic, New York), pp. 21-132.
34. Takahata, N. & Tajima, F. (1991) Mol. Biol. Evol. 8, 494-502.
35. Efron, B. (1982) The Jackknife, the Bootstrap and Other Sampling Plans (Soc. Ind. Appl. Math., Philadelphia).
36. Saitou, N. & Nei, M. (1987) Mol. Biol. Evol. 4, 406-425.
37. Tajima, F. (1993) Mol. Biol. Evol. 10, 677-688.
38. Suzuki, Y., Kato, H., Naeve, C. W. & Webster, R. G. (1989) J. Virol. 63, 4298-4302.
39. Ina, Y. (1994) J. Mol. Evol., in press.