Characterization of an in vitro-selected RNA ligand to the HIV-1 rev protein

Journal of Molecular Biology

Volumn 235, Issue 1, 1994, Pages 237-247

  Jensen, Kirk B ^a   Green, Louis ^b   MacDougal Waugh, Sheela ^b   Tuerk, Craig ^b  

^a UNIVERSITY OF COLORADO   (United States)

^b Nexagen   (United States)

Author keywords

protein RNA interaction; Rev; RNA ligand; RRE; SELEX

Indexed keywords

REV PROTEIN; VIRUS PROTEIN;

ARTICLE; HUMAN IMMUNODEFICIENCY VIRUS 1; NONHUMAN; PRIORITY JOURNAL; PROTEIN NUCLEIC ACID INTERACTION;

HUMAN IMMUNODEFICIENCY VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1;

EID: 0028011142     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0022-2836(05)80030-0     Document Type: Article

References (27)

1. HIV-1 Rev regulation involves recognition of non-Watson-Crick base pairs in viral RNA
2. Inhibition of human immunodeficiency virus type 1 rev-rev response element complex formation by complementary oligonucleotides
3. Characterization of HIV-1 rev protein: binding stoichiometry and minimal RNA substrate
4. Sequence-specific interaction of R17 coat protein with its ribonucleic acid binding site
5. Nomenclature for incompletely specified bases in nucleic acid sequences: recommendations 1984
6. Specific binding of HIV-1 recombinant rev protein to the rev-responsive element in vitro
7. Functional analysis of CAR, the target sequence for the rev protein of HIV-1
8. Probing the structure of RNAs in solution
9. HIV-1 regulator of virion expression (rev) protein binds to an RNA stem-loop structure located within the rev responsive element region
10. Human immunodeficiency virus type I regulator of virion expression, rev, forms nucleoprotein filaments after binding to a purine-rich “bubble” located within the rev-responsive region of viral mRNAs
11. Human immunodeficiency virus rev protein recognizes a target sequence in rev-responsive element RNA within the context of secondary structure
12. SELEXION: systematic evolution of ligands by exponential enrichment with integrated optimization by nonlinear analysis
13. Recognition of the high affinity binding site in rev-responsive element RNA by the human immunodeficiency virus type-1 rev protein
14. Improved predictions of secondary structure for RNA
15. RNA binding by the tat and rev proteins of HIV-1
16. Specific binding of a basic peptide from HIV-1 Rev.
17. In vitro evolution of RNA ligands against HIV-1 proteins
18. The HIV-1 rev trans-activator acts through a structured target sequence to activate nuclear export of unspliced viral mRNA
19. Intragenic cis-acting art gene-responsive sequences of the human immunodeficiency virus
20. Functional group substitutions as probes of hydrogen bonding between GA mismatches in RNA internal loops
21. Selection of high affinity RNA ligands to the bacteriophage R17 coat protein
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23. Autogenous translational operator recognized by bacteriophage T4 DNA polymerase
24. In vitro evolution of high-affinity RNA ligands to the HIV-1 rev protein
25. Phe in solution studied by phosphodiester bond modification with ethylnitrosourea
26. Sequence-specific RNA binding by the HIV-I rev protein
27. On finding all suboptimal foldings of a RNA molecule