Gene expression during plant embryogenesis and germination: An overview

Plant Cell

Volumn 5, Issue 10, 1993, Pages 1401-1410

  Thomas, Terry L ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

SPERMATOPHYTA;

EID: 0027674293     PISSN: 10404651     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review

References (79)

1. Allen, R.D., Trelease, R.N., and Thomas, T.L. (1988). Regulation of isocitrate lyase gene expression in sunflower. Plant Physiol. 86, 527-532.
2. Allen, R.D., Bernier, F., Lessard, P.A., and Beachy, R.N. (1989). Nuclear factors interact with a soybean β-conglycinin enhancer. Plant Cell 1, 623-631.
3. Amaya, E., Musci, T.J., and Kirschner, M.W. (1991). Expression of a dominant negative mutant of the FGF receptor disrupts mesoderm formation in Xenopus embryos. Cell 66, 257-270.
4. Bäumlein, H., Wobus, U., Pustell, J., and Kafatos, F. (1986). The legumin gene family: Structure of a B-type gene of Vicia faba and a possible legumin gene specific regulatory element. Nucl. Acids Res. 14, 2707-2720.
5. Bäumlein, H., Boerjan, W., Nagy, I., Panitz, R., and Wobus, U. (1991). Upstream sequences regulating legumin gene expression in heterologous transgenic plants. Mol. Gen. Genet. 225, 121-128.
6. Bäumlein, H., Nagy, I., Villaroel, R., Inzé, D., and Wobus, U (1992). Cis-analysis of a seed protein gene promoter: The conservative RY repeat CATGCATG within the legumin box is essential for tissue-specific expression of a legumin gene. Plant J. 2, 233-239.
7. Bogue, M.A., Von der Haar, R.A., Nuccio, M.L., Griffing, L.R., and Thomas, T.L. (1990). Developmentally regulated expression of a sunflower 11S seed protein gene in transgenic tobacco. Mol. Gen. Genet. 221, 49-57.
8. Bray, E.A., and Beachy, R.N. (1985). Regulation by ABA of β-conglycinin expression in cultured developing soybean cotyledons. Plant Physiol. 79, 746-750.
9. Bustos, M.M., Guiltinan, M.J., Jordano, J., Begum, D., Kalkan, F.A., and Hall, T.C. (1989). Regulation of β-glucuronidase expression in transgenic tobacco plants by an A/T-rich, cis-acting sequence found upstream of a French bean β-phaseolin gene. Plant Cell 1, 839-853.
10. Bustos, M.M., Begum, D., Kalkan, F.A., Battraw, M.J., and Hall, T.C. (1991). Positive and negative cis-acting DNA domains are required for spatial and temporal regulation of gene expression by a seed storage protein promoter. EMBO J. 10, 1469-1479.
11. Chen, Z.-L., Pan, N.-S., and Beachy, R.N. (1988). A DNA sequence element that confers seed-specific enhancement to a constitutive promoter. EMBO J. 7, 297-302.
12. Chuck, G., Robbins, T., Charanjit, N., Ralston, E., Courtney-Gutterson, N., and Dooner, H.K. (1993). Tagging and cloning of a petunia flower color gene with the maize transposable element Activator. Plant Cell 5, 371-378.
13. Comai, L., Dietrich, R.A., Maslyar, O.J., Baden, C.S., and Harada, JJ. (1989). Coordinate expression of transcriptionally regulated isocitrate lyase and malate synthase genes in Brassica napus L. Plant Cell 1, 293-300.
14. Cordewener, J., Booij, H., Van der Zandt, H., Van Engelen, F., Van Kammen, A., and De Vries, S. (1991). Tunicamycin-inhibited carrot somatic embryogenesis can be restored by secreted cationic peroxidase isoenzymes. Planta 184, 478-486.
15. De Jong, A.J., Cordewener, J., Lo Schlavo, F., Terzi, M., Vandekerckhove, J., Van Kammen, A., and De Vries, S.C. (1992). A carrot somatic embryo mutant is rescued by chitinase. Plant Cell 4, 425-433.
16. De Jong, A.J., Schmidt, E.D.L., and De Vries, S.C. (1993a). Early events in higher plant embryogenesis. Plant Mol. Biol. 22, 367-377.
17. De Jong, A.J., Heidstra, R., Spaink, H.P., Hartog, M.V., Meljer, E.A., Hendriks, T., Lo Schiavo, F., Terzi, M., Bisseling, T., Van Kammen, A., and De Vries, S.C. (1993b). Rhizobium lipooligosaccharides rescue a carrot somatic embryo mutant. Plant Cell 5, 615-620.
18. Dickinson, C.D., Evans, R.P., and Nielsen, N.C. (1988). RY repeats are conserved in the 5′-flanking region of legume seed protein genes. Nucl. Acids Res. 16, 371.
19. Dietrich, R.A., Maslyar, D.J., Heupel, R.C., and Harada, J.J. (1989). Spatial patterns of gene expression in Brassica napus seedlings: Identification of a cortex-specific gene and localization of mRNAs encoding isocitrate lyase and a polypeptide homologous to pro-teinases. Plant Cell 1, 73-80.
20. Dietrich, R.A., Radke, S.E., and Harada, J.J. (1992). Downstream DNA sequences are required to activate a gene expressed in the root cortex of embryos and seedlings. Plant Cell 4, 1371-1382.
21. Dure, L., III, Crouch, M., Harada, J., Ho, T-H.D., Mundy, J., Quatrano, R., Thomas, T., and Sung, Z.R. (1989). Common amino acid sequence domains among the tea proteins of higher plants. Plant Mol. Biol. 12, 475-486.
22. Fedoroff, N.V., and Smith, D.L. (1993). A versatile system for detecting transposition in Arabidopsis. Plant J. 3, 273-289.
23. Finkelstein, R.R., Tenbarge, K.M., Shumway, J.E., and Crouch, M.L. (1985). Role of ABA in maturation of rapeseed embryos. Plant Physiol. 78, 630-636.
24. Gatehouse, J.A., Evans, I.M., Croy, R.R.D., and Boulter, D. (1986). Differential expression of genes during legume seed development. Phil. Trans. Roy. Soc. Lond. Sen B 314, 367-384.
25. Gatz, C., Kaiser, A., and Wendenburg, R. (1991). Regulation of a modified CaMV 35S promoter by the Tn10-encoded Tet repressor. Mol. Gen. Genet. 227, 229-237.
26. Goldberg, R.B. (1986). Regulation of plant gene expression. Phil. Trans. Roy. Soc. Lond. Ser. B 314, 343-353.
27. Goldberg, R.B., Barker, S.J., and Perez-Grau, L. (1989). Regulation of gene expression during plant embryogenesis. Cell 56, 149-160.
28. Goodrich, J., Carpenter, R., and Coen, E.S. (1992). A common gene regulates pigmentation pattern in diverse plant species. Cell 68, 955-964.
29. Graham, I.A., Smith, L.M., Leaver, C.J., and Smith, S.M. (1990) Developmental regulation of expression of the malate synthase gene in transgenic plants. Plant Mol. Biol. 15, 539-549.
30. Guerche, P., Tire, C., Grossi de Sa, F., DeClercq, A., Van Montagu, M., and Krebbers, E. (1990). Differential expression of the Arabidopsis 2S albumin genes and the effect of increasing gene family size. Plant Cell 2, 469-478.
31. Guiltinan, M.J., Marcotte, W.R., and Quatrano, R.S. (1990). A leucine zipper protein that recognizes an abscisic acid response element. Science 250, 267-270.
32. Harada, J.J., Baden, C.S., and Comai, L. (1988). Spatially regulated genes expressed during seed germination and postgerminative development are activated during embryogeny. Mol. Gen. Genet. 212, 466-473.
33. Hattori, T., Vasil, V., Rosenkrans, L., Hannah, L.C., McCarty, D.R., and Vasil, I.K. (1992). The Viviparous-1 gene and abscisic acid activate the C1 regulatory gene for anthocyanin biosynthesis during seed maturation in maize. Genes Dev. 6, 609-618.
34. Hughes, D.W., and Galau, G.A. (1988). Temporally modular gene expression during cotyledon development. Genes Dev. 3, 358-369.
35. Jofuku, K.D., Okamuro, J.K., and Goldberg, R.B. (1987). Interaction of an embryo DNA binding protein with a soybean lectin gene upstream region. Nature 328, 734-737.
36. Jordano, J., Almoguera, C., and Thomas, T.L. (1989). A sunflower helianthinin gene upstream sequence ensemble contains an enhancer and sites of nuclear protein interaction. Plant Cell 1, 855-866.
37. Kamalay, J.C., and Goldberg, R.B. (1980). Regulation of structural gene expression in tobacco. Cell 19, 935-946.
38. Kawagoe, Y., and Murai, N. (1992). Four distinct nuclear proteins recognize in vitro the proximal promoter of the bean seed storage protein β-phaseolin gene conferring spatial and temporal control. Plant J. 2, 927-936.
39. Lam, E., and Chua, N.-H. (1991). Tetramer of a 21-base pair synthetic element confers seed expression and transcriptional enhancement in response to water stress and abscisic acid. J. Biol. Chem. 266, 17131-17135.
40. Lelievre, J.-M., Oliveira, L.O., and Nielsen, N.C. (1992). 5′-CATGCAT-3′ elements modulate the expression of glycinin genes. Plant Physiol. 98, 387-391.
41. Lessard, P.A., Allen, R.A., Bernier, F., Crispino, J.D., Fujiwara, T., and Beachy, R.N. (1991). Multiple nuclear factors interact with upstream sequences of the differentially regulated β-conglycinin genes. Plant Mol. Biol. 16, 397-413.
42. Lessard, P.A., Allen, R.D., Fujiwara, T., and Beachy, R.N. (1993). Upstream regulatory sequences from two β-conglycinin genes. Plant Mol. Biol. 22, 873-885.
43. Liang, P., and Pardee, A.B. (1992). Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction. Science 257, 967-971.
44. Liu, C.-m., Xu, Z.-h., and Chua, N.-H. (1993). Auxin polar transport is essential for the establishment of bilateral symmetry during early plant embryogenesis. Plant Cell 5, 621-630.
45. Lopes, M.A., and Larkins, B.A. (1993). Endosperm origin, development, and function. Plant Cell 5, 1383-1399.
46. Ludwig, S.R., Habera, L.F., Dellaporta, S.L., and Wessler, S.R. (1989). Lc, a member of the maize R gene family responsible for tissue-specific anthocyanin production, encodes a protein similar to transcriptional activators and contains the myc-homology region. Proc. Natl. Acad. Sci. USA 86, 7092-7096.
47. Marcotte, W.R., Jr., Russell, S.H., and Quatrano, R.S. (1989). Abscisic acid response sequences from the Em gene of wheat. Plant Cell 1, 969-976.
48. Mariani, C., De Beuckeleer, M., Truettner, J., Leemans, J., and Goldberg, R.B. (1990). Induction of male sterility in plants by a chimaeric ribonuclease gene. Nature 347, 737-741.
49. McGurl, B., Pearce, G., Orozco-Cardenas, M., and Ryan, C.A. (1992). Structure, expression and antisense inhibition of the systemin precursor gene. Science 225, 1570-1573.
50. Meinke, D.W. (1991). Perspectives on genetic analysis of plant embryogenesis. Plant Cell 3, 857-866.
51. Mergny, J.L., Duval-Valentin, G., Nguyen, C.H., Perrouault, L., Faucon, B., Rougee, M., Montenay-Garestier, T., Bisagni, E., and Helene, C. (1992). Triple helix-specific ligands. Science 256, 1681-1684.
52. Mundy, J., Yamaguchi-Shinozaki, K., and Chua, N.-H. (1990). Nuclear proteins bind conserved elements in the abscisic acid-responsive promoter of a rice rab gene. Proc. Natl. Acad. Sci. USA 87, 1406-1410.
53. Nasrallah, J.B., and Nasrallah, M.E. (1993). Pollen-stigma signaling in the sporophytic self-incompatibility response. Plant Cell 5, 1325-1335.
54. Oeda, K., Salinas, J., and Chua, N.-H. (1991). A tobacco bZip transcription activator (TAF-1) binds to a G-box-like motif conserved in plant genes. EMBO J. 10, 1793-1802.
55. Pederson, T.J., Arwood, L.J., Spiker, S., Guiltinan, M.J., and Thompson, W.F. (1991). High mobility group chromosomal proteins bind to AT-rich tracts flanking plant genes. Plant Mol. Biol. 16, 95-104.
56. Perez-Grau, L., and Goldberg, R.B. (1989). Soybean seed protein genes are regulated spatially during embryogenesis. Plant Cell 1, 1095-1109.
57. Pysh, L.D., Aukerman, M.J., and Schmidt, RJ. (1993). OHP1: A maize basic domain/leucine zipper protein that interacts with Opaque2. Plant Cell 5, 227-236.
58. Quatrano, R.S. (1987). The role of hormones during seed development. In Plant Hormones and Their Role in Plant Growth and Development, P.J. Davies, ed (Boston: Martinus Nijhoff Publishers), pp. 494-514.
59. Rivin, C.J., and Grudt, T. (1991). Abscisic acid and the developmental regulation of embryo storage proteins in maize. Plant Physiol. 95, 358-365.
60. Salinas, J., Oeda, K., and Chua, N.-H. (1992). Two G-box-related sequences confer different expression patterns in transgenic tobacco. Plant Cell 4, 1485-1493.
61. Schiavone, F.M., and Racusen, R.H. (1991). Regeneration of the root pole in surgically transected carrot embryos occurs by position-dependent, proximodistal replacement of missing tissues. Development 113, 1305-1313.
62. Schindler, U, Beckmann, H., and Cashmore, A.R. (1992). TGAI and G-box binding factors: Two distinct classes of Arabidopsis leucine zipper proteins compete for the G-box-like element TGACGTGG. Plant Cell 4, 1309-1319.
63. Schmidt, R.J., Ketudat, M., Aukerman, M.J., and Hoschek, G. (1992). Opaque-2 is a transcriptional activator that recognizes a specific target site in 22-kD zein genes. Plant Cell 4, 689-700.
64. Shotwell, M.A., and Larkins, B.A. (1989). The biology of seed storage proteins. In The Biochemistry of Plants, Vol. 15, A. Marcus, ed (New York: Academic Press), pp. 297-345.
65. Skriver, K., and Mundy, J. (1990). Gene expression in response to abscisic acid and osmotic stress. Plant Cell 2, 503-512.
66. Sterk, P., Booij, H., Scheiiekens, G.A., Van Kammen, A., and De Vries, S.C. (1991). Cell-specific expression of the carrot EP2 lipid transfer protein gene. Plant Cell 3, 907-921.
67. Thomas, T.L., Vivekananda, J., and Bogue, M.A. (1991). ABA regulation of gene expression in embryos and mature plants. In Abscisic Acid: Physiology and Biochemistry, WJ. Davies and H.G. Jones, eds (Oxford: Bios Scientific Publishers), pp. 125-135.
68. Van Engelen, F.A., and De Vries, S.C. (1992). Extracellular proteins in plant embryogenesis. Trends Genet. 8, 66-70.
69. Van Engelen, F.A., Hartog, M.V., Thomas, T.L., Taylor, A., Sturm, A., Van Kammen, A., and De Vries, S.C (1993). The carrot secreted glycoprotein gene EP1 is expressed in the epidermis and has sequence homology to Brassica S-locus glycoproteins. Plant J., in press.
70. Van Gelder, R.N., von Zastrow, M.E., Yool, A., Dement, W.C., Barehas, J.D., and Eberwine, J.H. (1990). Amplified RNA synthesized from limited quantities of heterogenous cDNA. Proc. Natl. Acad. Sci. USA 87, 1663-1667.
71. Vellanoweth, R.L., and Okita, TW. (1993). Regulation of expression of wheat and rice seed storage protein genes. In Control of Plant Gene Expression, D.P.S. Verma, ed (Boca Raton, FL: CRC Press, Inc.), pp. 377-392.
72. Vilardell, J., Goday, A., Freire, M.A., Torrent, M., Martinez, M.C., Torne, J.M., and Pagès, M. (1990). Gene sequence, developmental expression and protein phosphorylation of RAB17 in maize. Plant Mol. Biol. 14, 423-432.
73. Vivekananda, J., Drew, M.C., and Thomas, T.L. (1992). Hormonal and environmental regulation of the carrot lea-class gene Dc3. Plant Physiol. 100, 576-581.
74. Voelker, T., Sturm, A., and Chrispeels, M.J. (1987). Differences in expression between two seed lectin alleles obtained from normal and lectin-deficient beans are maintained in transgenic tobacco. EMBO J. 6, 3571-3577.
75. Wang, Z., and Brown, D.D. (1991). A gene expression screen. Proc. Natl. Acad. Sci. USA 88, 11505-11509.
76. Weintraub, H., Devis, R., Tapscott, S., Thayer, M., Krause, M., Benezra, R., Blackwell, T.K., Turner, D., Rupp, R., Hollenberg, S., Zhuang, Y., and Lassar, A. (1991). The myoD gene family: Nodal point during specification of the muscle cell lineage. Science 251, 761-766.
77. West, M.A.L., and Harada, J.J. (1993). Embryogenesis in higher plants: An overview. Plant Cell 5, 1361-1369.
78. Wilde, R.J., Shufflebottom, D., Cooke, S., Jasinska, I., Merryweather, A., Berl, R., Brammar, W.J., Bevan, M.J., and Schuch, W. (1992). Control of gene expression in tobacco cells using a bacterial operator-repressor system. EMBO J. 11, 1251-1259.
79. Zimmerman, J.L. (1993). Somatic embryogenesis: A model for early development in higher plants. Plant Cell 5, 1411-1423.