-
2
-
-
0000379806
-
The genetic control of tertiary protein structure: Studies with model systems
-
Anfinsen, C. B., Epstein, C. J. & Goldberger, R. F. (1963). The genetic control of tertiary protein structure: studies with model systems. Cold Spring Harbor Symp. Quant, Biol. 28, 439-449.
-
(1963)
Cold Spring Harbor Symp. Quant. Biol.
, vol.28
, pp. 439-449
-
-
Anfinsen, C.B.1
Epstein, C.J.2
Goldberger, R.F.3
-
3
-
-
0026562263
-
The SWISS-PROT protein sequence data bank
-
Bairoch, A. & Boeckmann, B. (1992). The SWISS-PROT protein sequence data bank. Nucl. Acids Res. 20, 2019-2022.
-
(1992)
Nucl. Acids Res.
, vol.20
, pp. 2019-2022
-
-
Bairoch, A.1
Boeckmann, B.2
-
4
-
-
0025865814
-
Amino acid sequence analysis of the annexin super-gene family of proteins
-
Barton, G. J., Newman, R. H., Freemont, P. S. & Crumpton, M. J. (1991). Amino acid sequence analysis of the annexin super-gene family of proteins. Eur. J. Biochem. 198, 749-760.
-
(1991)
Eur. J. Biochem.
, vol.198
, pp. 749-760
-
-
Barton, G.J.1
Newman, R.H.2
Freemont, P.S.3
Crumpton, M.J.4
-
5
-
-
0025935158
-
Patterns of divergence in homologous proteins as indicators of secondary and tertiary structure: A prediction of the structure of the catalytic domain of protein kinases
-
Benner, S, A. & Gerloff, D. (1990). Patterns of divergence in homologous proteins as indicators of secondary and tertiary structure: a prediction of the structure of the catalytic domain of protein kinases. Advan. Enz. Reg. 31, 121-181.
-
(1990)
Advan. Enz. Reg.
, vol.31
, pp. 121-181
-
-
Benner, S.A.1
Gerloff, D.2
-
6
-
-
0026497463
-
Correct structure prediction?
-
Benner, S. A., Cohen, M. A. & Gerloff, D. (1992). Correct structure prediction? Nature (London), 359, 781.
-
(1992)
Nature (London)
, vol.359
, pp. 781
-
-
Benner, S.A.1
Cohen, M.A.2
Gerloff, D.3
-
7
-
-
0017411710
-
The Protein Data Bank: A computer-based archival file for macromolecular structures
-
Bernstein, F. C., Koetzle, T. F., Williams, G. J. B., Meyer, E. F., Brice, M. D., Rodgers, J. R., Kennard, O., Shimanouchi, T. & Tasumi, M. (1977). The Protein Data Bank: a computer-based archival file for macromolecular structures. J. Mol. Biol. 112, 535-542.
-
(1977)
J. Mol. Biol.
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.B.3
Meyer, E.F.4
Brice, M.D.5
Rodgers, J.R.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
8
-
-
0023718983
-
Secondary structure prediction: Combination of three different methods
-
Biou, V., Gibrat, J. F., Levin, J. M., Robson, B. & Gamier, J. (1988). Secondary structure prediction: combination of three different methods. Protein Eng. 2, 185-191.
-
(1988)
Protein Eng.
, vol.2
, pp. 185-191
-
-
Biou, V.1
Gibrat, J.F.2
Levin, J.M.3
Robson, B.4
Gamier, J.5
-
9
-
-
0026530383
-
Quantitative analysis of protein far UV circular dichroism spectra by neural networks
-
Böhm, G., Muhr, R. & Jaenicke, R. (1992). Quantitative analysis of protein far UV circular dichroism spectra by neural networks. Protein Eng. 5, 191-195.
-
(1992)
Protein Eng.
, vol.5
, pp. 191-195
-
-
Böhm, G.1
Muhr, R.2
Jaenicke, R.3
-
10
-
-
0024202930
-
Protein secondary structure and homology by neural networks
-
Bohr, H., Bohr, J., Brunak, S., Cotterill, R. M. J., Lautrup, B., Nerskov, L., Olsen, O. H. & Petersen, S. B. (1988). Protein secondary structure and homology by neural networks. FEBS Letters, 241, 223-228.
-
(1988)
FEBS Letters
, vol.241
, pp. 223-228
-
-
Bohr, H.1
Bohr, J.2
Brunak, S.3
Cotterill, R.M.J.4
Lautrup, B.5
Nerskov, L.6
Olsen, O.H.7
Petersen, S.B.8
-
11
-
-
0025155981
-
A novel approach to prediction of the 3-dimensional structures of protein backbones by neural networks
-
Bohr, H., Bohr, J., Brunak, S., Fredholm, H., Lautrup, B. & Petersen, S. B. (1990). A novel approach to prediction of the 3-dimensional structures of protein backbones by neural networks. FEBS Letters, 261, 43-46.
-
(1990)
FEBS Letters
, vol.261
, pp. 43-46
-
-
Bohr, H.1
Bohr, J.2
Brunak, S.3
Fredholm, H.4
Lautrup, B.5
Petersen, S.B.6
-
12
-
-
0027125735
-
What's in a genome?
-
Bork, P., Ouzonis, C., Sander, C., Scharf, M., Schneider, R. & Sonnhammer, E. (1992). What's in a genome? Nature (London), 358, 287.
-
(1992)
Nature (London)
, vol.358
, pp. 287
-
-
Bork, P.1
Ouzonis, C.2
Sander, C.3
Scharf, M.4
Schneider, R.5
Sonnhammer, E.6
-
13
-
-
0024387058
-
PRONET: A microcomputer program for predicting the secondary structure of proteins with a neural network
-
Bossa, F. & Pascarella, S. (1990). PRONET: a microcomputer program for predicting the secondary structure of proteins with a neural network. CABIOS, 5, 319-320.
-
(1990)
CABIOS
, vol.5
, pp. 319-320
-
-
Bossa, F.1
Pascarella, S.2
-
14
-
-
0001644632
-
Between objectivity and subjectivity
-
Brändén, C.-I. & Jones, T. A. (1990). Between objectivity and subjectivity. Nature (London), 343, 687-689.
-
(1990)
Nature (London)
, vol.343
, pp. 687-689
-
-
Brändén, C.-I.1
Jones, T.A.2
-
15
-
-
0015967881
-
Prediction of protein conformation
-
Chou, P. Y. & Fasman, U. D. (1974). Prediction of protein conformation. Biochemistry, 13, 211-215.
-
(1974)
Biochemistry
, vol.13
, pp. 211-215
-
-
Chou, P.Y.1
Fasman, U.D.2
-
16
-
-
0021101195
-
Secondary structure assignment for α/β proteins by a combinatorial approach
-
Cohen, F. E., Abarbanel, R. M., Kuntz, I. D. & Fletterick, R. J. (1983). Secondary structure assignment for α/β proteins by a combinatorial approach. Biochemistry, 22, 4894-4904.
-
(1983)
Biochemistry
, vol.22
, pp. 4894-4904
-
-
Cohen, F.E.1
Abarbanel, R.M.2
Kuntz, I.D.3
Fletterick, R.J.4
-
17
-
-
0023048287
-
Turn prediction in proteins using a pattern-matching approach
-
Cohen, F. E., Abarbanel, R. M., Kuntz, I. D. & Fletterick, R. J. (1986). Turn prediction in proteins using a pattern-matching approach. Biochemistry, 25, 266-275.
-
(1986)
Biochemistry
, vol.25
, pp. 266-275
-
-
Cohen, F.E.1
Abarbanel, R.M.2
Kuntz, I.D.3
Fletterick, R.J.4
-
18
-
-
0003801275
-
Neural networks: The early days
-
(Touretzky, D. S., ed.), Morgan Kaufmann, San Mateo, CA
-
Cowan, J. D. (1990). Neural networks: the early days. In Neural Information Processing Systems 2 (Touretzky, D. S., ed.), pp. 828-842, Morgan Kaufmann, San Mateo, CA.
-
(1990)
Neural Information Processing Systems 2
, pp. 828-842
-
-
Cowan, J.D.1
-
21
-
-
0000961820
-
Protein conformation prediction
-
(Fasman, G. D., ed.), Plenum, New York and London
-
Fasman, G. F. (1989). Protein conformation prediction. In Prediction of Protein Structure and the Principles of Protein Conformation (Fasman, G. D., ed.), pp. 193-316, Plenum, New York and London.
-
(1989)
Prediction of Protein Structure and the Principles of Protein Conformation
, pp. 193-316
-
-
Fasman, G.F.1
-
22
-
-
0024965788
-
DNA-binding domain ancestry
-
Frampton, J., Leutz, A., Gibson, T. J. & Graf, T. (1989). DNA-binding domain ancestry. Nature (London), 342, 134.
-
(1989)
Nature (London)
, vol.342
, pp. 134
-
-
Frampton, J.1
Leutz, A.2
Gibson, T.J.3
Graf, T.4
-
23
-
-
85030082772
-
Prediction of protein structure
-
(Brunak, S., ed.), Institute for Scientific Interchange Foundation, Torino, Italy, in the press
-
Garnier, J. (1993). Prediction of protein structure. In Biological Sequences: Finding Structure and Function by Neural Networks (Brunak, S., ed.), Institute for Scientific Interchange Foundation, Torino, Italy, in the press.
-
(1993)
Biological Sequences: Finding Structure and Function by Neural Networks
-
-
Garnier, J.1
-
24
-
-
0017873321
-
Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins
-
Garnier, J., Osguthorpe, D. J. & Robson, B. (1978). Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. J. Mol. Biol. 120, 97-120.
-
(1978)
J. Mol. Biol.
, vol.120
, pp. 97-120
-
-
Garnier, J.1
Osguthorpe, D.J.2
Robson, B.3
-
25
-
-
0025964419
-
An extension of secondary structure prediction towards the prediction of the tertiary structure
-
Garrett, R. C., Thornton, J. M. & Taylor, W. R. (1991). An extension of secondary structure prediction towards the prediction of the tertiary structure. FEBS Letters, 280, 141-146.
-
(1991)
FEBS Letters
, vol.280
, pp. 141-146
-
-
Garrett, R.C.1
Thornton, J.M.2
Taylor, W.R.3
-
26
-
-
0023555768
-
Further developments of protein secondary structure prediction using information theory. New Parameters and consideration of residue pairs
-
Gibrat, J.-F., Gamier, J. & Robson, B. (1987). Further developments of protein secondary structure prediction using information theory. New Parameters and consideration of residue pairs. J. Mol. Biol. 198, 425-443.
-
(1987)
J. Mol. Biol.
, vol.198
, pp. 425-443
-
-
Gibrat, J.-F.1
Gamier, J.2
Robson, B.3
-
27
-
-
0027465712
-
Proposed structure for the DNA-binding domain of the helix-loop-helix family of eukaryotic gene regulatory proteins
-
Gibson, T. J., Thompson, J. D. & Abagyan, R. A. (1993). Proposed structure for the DNA-binding domain of the helix-loop-helix family of eukaryotic gene regulatory proteins. Protein Eng. 6, 41-50.
-
(1993)
Protein Eng.
, vol.6
, pp. 41-50
-
-
Gibson, T.J.1
Thompson, J.D.2
Abagyan, R.A.3
-
29
-
-
0003979924
-
-
Addison-Wesley, Redwood City, CA
-
Hertz, J. A., Krogh, A. & Palmer, R. G. (1991). Introduction to the Theory of Neural Computation. Addison-Wesley, Redwood City, CA.
-
(1991)
Introduction to the Theory of Neural Computation
-
-
Hertz, J.A.1
Krogh, A.2
Palmer, R.G.3
-
30
-
-
0026672260
-
Prediction of structural and functional features of protein and nucleic acid sequences by artificial neural networks
-
Hirst, J. D. & Sternberg, M. J. E. (1992). Prediction of structural and functional features of protein and nucleic acid sequences by artificial neural networks. Biochemistry, 31, 615-623.
-
(1992)
Biochemistry
, vol.31
, pp. 615-623
-
-
Hirst, J.D.1
Sternberg, M.J.E.2
-
31
-
-
0027092678
-
Selection of representative protein data sets
-
Hobohm, U., Scharf, M., Sehneider, R. & Sander, C. (1992). Selection of representative protein data sets. Protein Sci. 1, 409-417.
-
(1992)
Protein Sci.
, vol.1
, pp. 409-417
-
-
Hobohm, U.1
Scharf, M.2
Sehneider, R.3
Sander, C.4
-
32
-
-
0000268209
-
Protein secondary structure prediction with a neural network
-
Holley, H. L. & Karplus, M. (1989). Protein secondary structure prediction with a neural network. Proc. Nat. Acad. Sci., U.S.A. 86, 152-156.
-
(1989)
Proc. Nat. Acad. Sci., U.S.A.
, vol.86
, pp. 152-156
-
-
Holley, H.L.1
Karplus, M.2
-
33
-
-
0026006843
-
The role of heat-shock and chaperone proteins in protein folding: Possible molecular mechanisms
-
Hubbard, T. J. P. & Sander, C. (1991). The role of heat-shock and chaperone proteins in protein folding: possible molecular mechanisms. Protein Eng. 4, 711-717.
-
(1991)
Protein Eng.
, vol.4
, pp. 711-717
-
-
Hubbard, T.J.P.1
Sander, C.2
-
34
-
-
0025301439
-
Protein secondary structure and circular dichroism: A practical guide
-
Johnson, C. W. J. (1990). Protein secondary structure and circular dichroism: a practical guide. Proteins: Struct. Funct. Genet. 7, 205-214.
-
(1990)
Proteins: Struct. Funct. Genet.
, vol.7
, pp. 205-214
-
-
Johnson, C.W.J.1
-
35
-
-
0020997912
-
Dictionary of protein secondary structure: Pattern recognition of hydrogen bonded and geometrical features
-
Kabsch, W. & Sander, C. (1983). Dictionary of protein secondary structure: pattern recognition of hydrogen bonded and geometrical features. Biopolymers, 22, 2577-2637.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
36
-
-
0024046664
-
A multivariate analysis method for discriminating protein secondary structural segments
-
Kanehisa, M. (1988). A multivariate analysis method for discriminating protein secondary structural segments. Protein Eng. 2, 87-92.
-
(1988)
Protein Eng.
, vol.2
, pp. 87-92
-
-
Kanehisa, M.1
-
37
-
-
0025048105
-
Molecular dynamics simulations in biology
-
Karplus, M. & Petsko, G. A. (1990). Molecular dynamics simulations in biology. Nature (London), 347, 631-639.
-
(1990)
Nature (London)
, vol.347
, pp. 631-639
-
-
Karplus, M.1
Petsko, G.A.2
-
38
-
-
0025334980
-
Improvements in protein secondary structure prediction by an enhanced neural network
-
Kneller, D. G., Cohen, F. E. & Langridge, R. (1990). Improvements in protein secondary structure prediction by an enhanced neural network. J. Mol. Biol. 214, 171-182.
-
(1990)
J. Mol. Biol.
, vol.214
, pp. 171-182
-
-
Kneller, D.G.1
Cohen, F.E.2
Langridge, R.3
-
39
-
-
0024283401
-
Improvements in a secondary structure prediction method based on a senrch for local sequence homologies and its use as a model building tool
-
Levin, J. M. & Garnier, J. (1988). Improvements in a secondary structure prediction method based on a senrch for local sequence homologies and its use as a model building tool. Biochim. Biophys. Acta, 955, 283-295.
-
(1988)
Biochim. Biophys. Acta
, vol.955
, pp. 283-295
-
-
Levin, J.M.1
Garnier, J.2
-
40
-
-
0023050277
-
An algorithm for secondary structure determination in proteins based on sequence similarity
-
Levin, J. M., Robson, B. & Garnier, J. (1986). An algorithm for secondary structure determination in proteins based on sequence similarity. FEBS Letters, 205, 303-308.
-
(1986)
FEBS Letters
, vol.205
, pp. 303-308
-
-
Levin, J.M.1
Robson, B.2
Garnier, J.3
-
41
-
-
0017309766
-
Structural patterns in globular proteins
-
Levitt, M. & Chothia, C. (1976). Structural patterns in globular proteins. Nature (London), 261, 552-558.
-
(1976)
Nature (London)
, vol.261
, pp. 552-558
-
-
Levitt, M.1
Chothia, C.2
-
42
-
-
0016209912
-
Structural principles of the globular organization of protein chains. A stereochemical theory of globular protein secondary structure
-
Lim, V. T. (1974). Structural principles of the globular organization of protein chains. A stereochemical theory of globular protein secondary structure. J. Mol. Biol. 88, 857-872.
-
(1974)
J. Mol. Biol.
, vol.88
, pp. 857-872
-
-
Lim, V.T.1
-
43
-
-
0000494468
-
-
(Touretzky, D. S., ed.), Morgan Kaufmann, San Mateo, CA
-
Lincoln, W. P. & Skrzypek, J. (1990). In Neural Information Processing Systems 2 (Touretzky, D. S., ed.), pp. 650-657, Morgan Kaufmann, San Mateo, CA.
-
(1990)
Neural Information Processing Systems 2
, pp. 650-657
-
-
Lincoln, W.P.1
Skrzypek, J.2
-
44
-
-
0027596624
-
Using knowledge-based neural networks to improve algorithms: Refining the Chou-Fasman algorithm for protein folding
-
in the press
-
Maclin, R. & Shavlik, J. W. (1993). Using knowledge-based neural networks to improve algorithms: refining the Chou-Fasman algorithm for protein folding. Machine Learning, in the press.
-
(1993)
Machine Learning
-
-
Maclin, R.1
Shavlik, J.W.2
-
45
-
-
0016772212
-
Comparison of the predicted and observed secondary structure of T4 phage lysozyme
-
Matthews, B. W. (1975). Comparison of the predicted and observed secondary structure of T4 phage lysozyme. Biochim. Biophys. Acta, 405, 442-451.
-
(1975)
Biochim. Biophys. Acta
, vol.405
, pp. 442-451
-
-
Matthews, B.W.1
-
46
-
-
0017166105
-
Status of empirical methods for the prediction of protein backbone topography
-
Maxfield, F. R. & Scheraga, H. A. (1976). Status of empirical methods for the prediction of protein backbone topography. Biochemistry, 15, 5138-5153.
-
(1976)
Biochemistry
, vol.15
, pp. 5138-5153
-
-
Maxfield, F.R.1
Scheraga, H.A.2
-
47
-
-
0018796254
-
Improvements in the prediction of protein topography by reduction of statistical errors
-
Maxfield, F. R. & Scheraga, H. A. (1979). Improvements in the prediction of protein topography by reduction of statistical errors. Biochemistry, 18, 697-704.
-
(1979)
Biochemistry
, vol.18
, pp. 697-704
-
-
Maxfield, F.R.1
Scheraga, H.A.2
-
49
-
-
5944250450
-
Energy parameters in polypeptides
-
Momany, F. A., McGuire, R. F., Burgess, A. W. & Scheraga, H. A. (1975). Energy parameters in polypeptides. J. Phys. Chem. 79, 2361-2381.
-
(1975)
J. Phys. Chem.
, vol.79
, pp. 2361-2381
-
-
Momany, F.A.1
McGuire, R.F.2
Burgess, A.W.3
Scheraga, H.A.4
-
50
-
-
0026492833
-
Protein secondary structure prediction using logic-based machine learning
-
Muggleton, S., King, R. D. & Sternberg, M. J. E. (1992). Protein secondary structure prediction using logic-based machine learning. Protein Eng. 5, 647-657.
-
(1992)
Protein Eng.
, vol.5
, pp. 647-657
-
-
Muggleton, S.1
King, R.D.2
Sternberg, M.J.E.3
-
52
-
-
0026749753
-
SH3 - An abundant protein domain in search of a function
-
Musacchio, A., Gibson, T., Lehto, V.-P. & Saraste, M. (1992). SH3 - an abundant protein domain in search of a function. FEBS Letters, 307, 55-61.
-
(1992)
FEBS Letters
, vol.307
, pp. 55-61
-
-
Musacchio, A.1
Gibson, T.2
Lehto, V.-P.3
Saraste, M.4
-
53
-
-
0026632379
-
Predicting protein secondary structure content. A tandem neural network approach
-
Muskal, S. M. & Kim, S.-H. (1992). Predicting protein secondary structure content. A tandem neural network approach. J. Mol. Biol. 225, 713-727.
-
(1992)
J. Mol. Biol.
, vol.225
, pp. 713-727
-
-
Muskal, S.M.1
Kim, S.-H.2
-
54
-
-
0015914842
-
Logical analysis of the mechanism of protein folding
-
Nagano, K. (1973). Logical analysis of the mechanism of protein folding. J. Mol. Biol. 75, 401-420.
-
(1973)
J. Mol. Biol.
, vol.75
, pp. 401-420
-
-
Nagano, K.1
-
55
-
-
0016692426
-
Logical analysis of the mechanism of protein folding
-
Nagano, K. & Hasegawa, K. (1975). Logical analysis of the mechanism of protein folding. J. Mol. Biol. 94, 257-281.
-
(1975)
J. Mol. Biol.
, vol.94
, pp. 257-281
-
-
Nagano, K.1
Hasegawa, K.2
-
56
-
-
0026061886
-
Improving the prediction of secondary structure of "TIM-barrel" enzymes
-
Niermann, T. & Kirschner, K. (1991). Improving the prediction of secondary structure of "TIM-barrel" enzymes (Corrigendum). Protein Eng. 4, 359-370.
-
(1991)
Protein Eng.
, vol.4
, pp. 359-370
-
-
Niermann, T.1
Kirschner, K.2
-
57
-
-
0026326273
-
Predicting protein secondary structure based on amino acid sequence
-
Nishikawa, K. & Noguchi, T. (1991). Predicting protein secondary structure based on amino acid sequence. Methods Enzymol. 202, 31-44.
-
(1991)
Methods Enzymol.
, vol.202
, pp. 31-44
-
-
Nishikawa, K.1
Noguchi, T.2
-
58
-
-
0025905314
-
Primary and secondary structural patterns in eukaryotic cytochrome P-450 families correspond to structures of the helix-rich domain of Pseudomonas putida cytochrome P-450cam
-
Ouzounis, C. A. & Melvin, W. T. (1991). Primary and secondary structural patterns in eukaryotic cytochrome P-450 families correspond to structures of the helix-rich domain of Pseudomonas putida cytochrome P-450cam. Eur. J. Biochem. 198, 307-315.
-
(1991)
Eur. J. Biochem.
, vol.198
, pp. 307-315
-
-
Ouzounis, C.A.1
Melvin, W.T.2
-
59
-
-
0014932569
-
Analysis of the code relating sequence to secondary structure in proteins
-
Pain, R. H. & Robson, B. (1970). Analysis of the code relating sequence to secondary structure in proteins. Nature (London), 227, 62-63.
-
(1970)
Nature (London)
, vol.227
, pp. 62-63
-
-
Pain, R.H.1
Robson, B.2
-
60
-
-
0000573263
-
Configurations of polypeptide chains with favored orientations around single bonds: Two new pleated sheets
-
Pauling, L. & Corey, R. B. (1951). Configurations of polypeptide chains with favored orientations around single bonds: two new pleated sheets. Proc. Nat. Acad. Sci., U.S.A. 37, 729-740.
-
(1951)
Proc. Nat. Acad. Sci., U.S.A.
, vol.37
, pp. 729-740
-
-
Pauling, L.1
Corey, R.B.2
-
61
-
-
76549252207
-
The structure of proteins: Two hydrogen-bonded helical configurations of the polypeptide chain
-
Pauling, L., Corey, R. B. & Branson, H. R. (1951). The structure of proteins: two hydrogen-bonded helical configurations of the polypeptide chain. Proc. Nat. Acad. Sci., U.S.A. 37, 205.
-
(1951)
Proc. Nat. Acad. Sci., U.S.A.
, vol.37
, pp. 205
-
-
Pauling, L.1
Corey, R.B.2
Branson, H.R.3
-
62
-
-
0025861478
-
Convex constraint analysis: A natural deconvolution of circular dichroism curves of proteins
-
Perczel, A., Hollósi, M., Tusnády, G. & Fasman, G, D. (1991). Convex constraint analysis: a natural deconvolution of circular dichroism curves of proteins. Protein Eng. 4, 669-679.
-
(1991)
Protein Eng.
, vol.4
, pp. 669-679
-
-
Perczel, A.1
Hollósi, M.2
Tusnády, G.3
Fasman, G.D.4
-
63
-
-
0026628269
-
Deconvolution of the circular dichroism spectra of proteins: The circular dichroism spectra of the anti-parallel β-sheet in proteins
-
Perczel, A., Park, K. & Fasman, G. D. (1992). Deconvolution of the circular dichroism spectra of proteins: the circular dichroism spectra of the anti-parallel β-sheet in proteins. Proteins: Struct. Funct. Genet. 13, 57-69.
-
(1992)
Proteins: Struct. Funct. Genet.
, vol.13
, pp. 57-69
-
-
Perczel, A.1
Park, K.2
Fasman, G.D.3
-
64
-
-
0014202294
-
Recognition of α-helical segments in proteins of known primary structure
-
Periti, P. F., Quagliarotti, G. & Liquori, A. M. (1967). Recognition of α-helical segments in proteins of known primary structure. J. Mol. Biol. 24, 313-322.
-
(1967)
J. Mol. Biol.
, vol.24
, pp. 313-322
-
-
Periti, P.F.1
Quagliarotti, G.2
Liquori, A.M.3
-
65
-
-
0026596926
-
A segment-based approach to protein secondary structure prediction
-
Presnell, S. R., Cohen, B. I. & Cohen, F. E. (1992). A segment-based approach to protein secondary structure prediction. Biochemistry, 31, 983-993.
-
(1992)
Biochemistry
, vol.31
, pp. 983-993
-
-
Presnell, S.R.1
Cohen, B.I.2
Cohen, F.E.3
-
66
-
-
0003474751
-
-
University Press, Cambridge, MA
-
Press, W. H., Flamery, B. P., Tenholsky, S. A. & Vetterling, W, T. (1986). Numerical Recipes: The Art of Scientific Computing, University Press, Cambridge, MA.
-
(1986)
Numerical Recipes: The Art of Scientific Computing
-
-
Press, W.H.1
Flamery, B.P.2
Tenholsky, S.A.3
Vetterling, W.T.4
-
67
-
-
0014693764
-
Statistical analysis of the distribution of amino acid residues among helical and non-helical regions in globular proteins
-
Ptitsyn, O. B. (1969). Statistical analysis of the distribution of amino acid residues among helical and non-helical regions in globular proteins, J. Mol. Biol. 42, 501-510.
-
(1969)
J. Mol. Biol.
, vol.42
, pp. 501-510
-
-
Ptitsyn, O.B.1
-
68
-
-
0020648054
-
Theory of protein secondary structure and algorithm of its prediction
-
Ptitsyn, O. B. & Finkelstein, A. V. (1983). Theory of protein secondary structure and algorithm of its prediction. Biopolymers, 22, 15-25.
-
(1983)
Biopolymers
, vol.22
, pp. 15-25
-
-
Ptitsyn, O.B.1
Finkelstein, A.V.2
-
69
-
-
0023803244
-
Predicting the secondary structure of globular proteins using neural network models
-
Qian, N. & Sejnowski, T. J. (1988). Predicting the secondary structure of globular proteins using neural network models. J. Mol. Biol. 202, 865-884.
-
(1988)
J. Mol. Biol.
, vol.202
, pp. 865-884
-
-
Qian, N.1
Sejnowski, T.J.2
-
70
-
-
0015243226
-
Analysis of the code relating sequence to conformation in proteins: Possible implications for the mechanism of formation of helical regions
-
Robson, B. & Pain, R. H. (1971). Analysis of the code relating sequence to conformation in proteins: possible implications for the mechanism of formation of helical regions. J. Mol. Biol. 58, 237-259.
-
(1971)
J. Mol. Biol.
, vol.58
, pp. 237-259
-
-
Robson, B.1
Pain, R.H.2
-
71
-
-
0026085495
-
Weak correlation between predictive power of individual sequence patterns and overall prediction accuracy in proteins
-
Rooman, M. J. & Wodak, S. (1991). Weak correlation between predictive power of individual sequence patterns and overall prediction accuracy in proteins. Proteins: Struct. Funct. Genet. 9, 69-78.
-
(1991)
Proteins: Struct. Funct. Genet.
, vol.9
, pp. 69-78
-
-
Rooman, M.J.1
Wodak, S.2
-
72
-
-
0024743902
-
Amino acid sequence templates derived from recurrent turn motifs in proteins: Critical evaluation of their predictive power
-
Rooman, M. J., Wodak, S. & Thornton, J. M. (1989). Amino acid sequence templates derived from recurrent turn motifs in proteins: critical evaluation of their predictive power. Protein Eng. 3, 23-27.
-
(1989)
Protein Eng.
, vol.3
, pp. 23-27
-
-
Rooman, M.J.1
Wodak, S.2
Thornton, J.M.3
-
73
-
-
0026009212
-
Prediction of protein backbone conformation based on seven structure assignments: Influence of local interactions
-
Rooman, M. J., Kocher, J. P. & Wodak, S. J. (1991). Prediction of protein backbone conformation based on seven structure assignments: influence of local interactions. J. Mol. Biol. 221, 961-979.
-
(1991)
J. Mol. Biol.
, vol.221
, pp. 961-979
-
-
Rooman, M.J.1
Kocher, J.P.2
Wodak, S.J.3
-
74
-
-
0026716833
-
Jury returns on structure prediction
-
Rost, B. & Sander, C. (1992). Jury returns on structure prediction. Nature (London), 360, 540.
-
(1992)
Nature (London)
, vol.360
, pp. 540
-
-
Rost, B.1
Sander, C.2
-
75
-
-
0027375587
-
Secondary structure prediction of all-helical proteins in two states
-
in the press
-
Rost, B. & Sander, C. (1993). Secondary structure prediction of all-helical proteins in two states. Protein Eng. in the press.
-
(1993)
Protein Eng.
-
-
Rost, B.1
Sander, C.2
-
76
-
-
0027403355
-
Progress in protein structure prediction?
-
Rost, B., Sander, C. & Schneider, R. (1993). Progress in protein structure prediction? Trends Biochem. Sci. 18, 120-123.
-
(1993)
Trends Biochem. Sci.
, vol.18
, pp. 120-123
-
-
Rost, B.1
Sander, C.2
Schneider, R.3
-
78
-
-
0022471098
-
Learning representations by back-propagating error
-
Rumelhart, D. E., Hinton, G. E. & Williams, R. J. (1986). Learning representations by back-propagating error. Nature (London), 323, 533-536.
-
(1986)
Nature (London)
, vol.323
, pp. 533-536
-
-
Rumelhart, D.E.1
Hinton, G.E.2
Williams, R.J.3
-
79
-
-
0026772714
-
Conservation analysis and structure prediction of the SH2 family of phosphotyrosine binding domains
-
Russell, R. B., Breed, J. & Barton, G. J. (1992). Conservation analysis and structure prediction of the SH2 family of phosphotyrosine binding domains. FEBS Letters, 304, 15-20.
-
(1992)
FEBS Letters
, vol.304
, pp. 15-20
-
-
Russell, R.B.1
Breed, J.2
Barton, G.J.3
-
80
-
-
0026674246
-
Predicting protein secondary structure with a nearest-neighbor algorithm
-
Salzberg, S. & Cost, S. (1992). Predicting protein secondary structure with a nearest-neighbor algorithm. J. Mol. Biol. 227, 371-374.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 371-374
-
-
Salzberg, S.1
Cost, S.2
-
81
-
-
0026030641
-
Database of homology-derived structures and the structural meaning of sequence alignment
-
Sander, C. & Schneider, R. (1991). Database of homology-derived structures and the structural meaning of sequence alignment. Proteins: Struct. Funct. Genet. 9, 56-68.
-
(1991)
Proteins: Struct. Funct. Genet.
, vol.9
, pp. 56-68
-
-
Sander, C.1
Schneider, R.2
-
83
-
-
85030082726
-
A theory of supervised learning
-
(Benhar, O. et al., eds), Elba, Italy
-
Solla, S. A. (1991). A theory of supervised learning. In Neural Networks from Biology to High Energy Physics (Benhar, O. et al., eds), pp. 11-28, Elba, Italy.
-
(1991)
Neural Networks from Biology to High Energy Physics
, pp. 11-28
-
-
Solla, S.A.1
-
84
-
-
0025633838
-
Machine learning approach for the prediction of protein secondary structure
-
Sternberg, M. J. E. & King, R. D. (1990). Machine learning approach for the prediction of protein secondary structure. J. Mol. Biol. 216, 441-457.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 441-457
-
-
Sternberg, M.J.E.1
King, R.D.2
-
85
-
-
0026682530
-
Predicting protein secondary structure using neural net and statistical methods
-
Stolorz, P., Lapedes, A. & Xia, Y. (1992). Predicting protein secondary structure using neural net and statistical methods. J. Mol. Biol. 225, 363-377.
-
(1992)
J. Mol. Biol.
, vol.225
, pp. 363-377
-
-
Stolorz, P.1
Lapedes, A.2
Xia, Y.3
-
86
-
-
0000628210
-
Role of proline in polypeptide chain configuration of proteins
-
Szent-Györgyi, A. G. & Cohen, C. (1957). Role of proline in polypeptide chain configuration of proteins. Science, 126, 697.
-
(1957)
Science
, vol.126
, pp. 697
-
-
Szent-Györgyi, A.G.1
Cohen, C.2
-
87
-
-
0024046573
-
Pattern matching methods in protein sequence comparison and structure prediction
-
Taylor, W. R. (1988). Pattern matching methods in protein sequence comparison and structure prediction. Protein Eng. 2, 77-86.
-
(1988)
Protein Eng.
, vol.2
, pp. 77-86
-
-
Taylor, W.R.1
-
88
-
-
0024328791
-
A holistic approach to protein structure alignment
-
Taylor, W. R. & Orengo, C. A. (1989). A holistic approach to protein structure alignment. Protein Eng. 2, 505-519.
-
(1989)
Protein Eng.
, vol.2
, pp. 505-519
-
-
Taylor, W.R.1
Orengo, C.A.2
-
89
-
-
0021099107
-
Prediction of super-secondary structure in proteins
-
Taylor, W. R. & Thornton, J. M. (1983). Prediction of super-secondary structure in proteins. Nature (London), 301, 540-542.
-
(1983)
Nature (London)
, vol.301
, pp. 540-542
-
-
Taylor, W.R.1
Thornton, J.M.2
-
90
-
-
0026424140
-
Prediction of progress at last
-
Thornton, J. M., Flores, T. P., Jones, D. T. & Swindells, M. B. (1992). Prediction of progress at last. Nature (London), 354, 105-100.
-
(1992)
Nature (London)
, vol.354
, pp. 105-1100
-
-
Thornton, J.M.1
Flores, T.P.2
Jones, D.T.3
Swindells, M.B.4
-
91
-
-
0025744920
-
Detection of common three-dimensional substructures in proteins
-
Vriend, G. & Sander, C. (1991). Detection of common three-dimensional substructures in proteins. Proteins: Struct. Funct. Genet. 11, 52-58.
-
(1991)
Proteins: Struct. Funct. Genet.
, vol.11
, pp. 52-58
-
-
Vriend, G.1
Sander, C.2
-
92
-
-
0026475673
-
Detection of secondary structure elements in proteins by hydrophobic cluster analysis
-
Woodcock, S., Mornon, J.-P. & Henrissat, B. (1992). Detection of secondary structure elements in proteins by hydrophobic cluster analysis. Protein Eng. 5, 629-635.
-
(1992)
Protein Eng.
, vol.5
, pp. 629-635
-
-
Woodcock, S.1
Mornon, J.-P.2
Henrissat, B.3
-
93
-
-
0026771388
-
Hybrid system for protein secondary structure prediction
-
Zhang, X., Mesirov, J. P. & Waltz, D. L. (1992). Hybrid system for protein secondary structure prediction. J. Mol. Biol. 225, 1049-1063.
-
(1992)
J. Mol. Biol.
, vol.225
, pp. 1049-1063
-
-
Zhang, X.1
Mesirov, J.P.2
Waltz, D.L.3
-
94
-
-
0026608073
-
Environment affects amino acid preference for secondary structure
-
Zhong, L., Johnson, W. & Curtis, J. (1992). Environment affects amino acid preference for secondary structure. Proc. Nat. Acad. Sci., U.S.A. 89, 4462-4465.
-
(1992)
Proc. Nat. Acad. Sci., U.S.A.
, vol.89
, pp. 4462-4465
-
-
Zhong, L.1
Johnson, W.2
Curtis, J.3
-
95
-
-
0023660653
-
Prediction of protein secondary structure and active sites using alignment of homologous sequences
-
Zvelebil, M. J., Barton, G. J., Taylor, W. R. & Sternberg, M. J. E. (1987). Prediction of protein secondary structure and active sites using alignment of homologous sequences. J. Mol. Biol. 195, 957-961.
-
(1987)
J. Mol. Biol.
, vol.195
, pp. 957-961
-
-
Zvelebil, M.J.1
Barton, G.J.2
Taylor, W.R.3
Sternberg, M.J.E.4
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