Molecular cloning and characterization of pebp2β, the heterodimeric partner of a novel drosophila runt-related dna binding protein pebp2α

Virology

Volumn 194, Issue 1, 1993, Pages 314-331

  Ogawa, Eiko ^a   Inuzuka, Manabu ^a   Maruyama, Mitsuo ^a   Satake, Masanobu ^a   Naito Fujimoto, Mariko ^a   Ito, Yoshiaki ^a   Shigesada, Katsuya ^b  

^a KYOTO UNIVERSITY   (Japan)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN;

ARTICLE; DNA BINDING; DROSOPHILA; MOLECULAR CLONING; NONHUMAN; POLYOMA VIRUS; PRIORITY JOURNAL; PROTEIN ANALYSIS;

3T3 CELLS; ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; ANIMAL; BASE SEQUENCE; CLONING, MOLECULAR; DNA-BINDING PROTEINS; ESCHERICHIA COLI; MACROMOLECULAR SYSTEMS; MICE; MICE, INBRED BALB C; MICE, NUDE; MOLECULAR SEQUENCE DATA; NEOPLASM PROTEINS; NEOPLASMS, EXPERIMENTAL; NUCLEAR PROTEINS; POLYOMAVIRUS; PROTEIN CONFORMATION; RNA, MESSENGER; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY, AMINO ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; SUPPORT, NON-U.S. GOV'T; TRANSCRIPTION FACTORS;

EID: 0027184229     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1006/viro.1993.1262     Document Type: Article

References (46)

1. Briggs, M. R., Kadonaga, J. T., Bell, S. P., and Than, R. (1986). Purification and biochemical characterization of the promoter-spe-cific transcription factor, Sp1. Science 234, 47-52.
2. Buluwela, L., Forster, A., Boehm, T., and Babbitts, T. H. (1989). A rapid procedure for colony screening using nylon filters. Nucleic Acids Res. 17, 452.
3. Cleveland, D. W., and Yen, T. J. (1989). Multiple determinants of eukaryotic mRNA stability. New Biol. 1, 121-126.
4. Clevers, F. I., Lonberg, N., Dunlap, S., Lacy, E., and Terhorst, C. (1989). An enhancer located in a CpG-island 3’ to the TCR/CD3-e gene confers T lymphocyte-specificity to its promoter. EMBO J. 8, 2527-2535.
5. Dynan, W. S. (1986). Promoters for house-keeping genes. Trends Genet. 2, 196-197.
6. Faisst, S., and Meyer, S. (1992). Compilation of vertebrate-encoded transcription factors. Nucleic Acids Res. 20, 3-26.
7. Farrell, P. J., Balkow, K., Hunt, T., and Jackson, R. J, (1977). Phos-phorylation of initiation factor elF-2 and the control of reticulocyte protein synthesis. Cell 11, 187-200.
8. Feinberg, A. P., and Vogelstein, B. (1983). A technique for radiola-beling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6-13.
9. Furukawa, K., Yamaguchi, Y., Ogawa, E., Shigesada, K., Satake, M., and Ito, Y. (1990). A ubiquitous repressor interacting with an F9 cell-specific silencer and its functional suppression by differen-tiated cell-specific positive factors. Cell Growth Differ. 1, 135-147.
10. Golemis, E. A., Speck, N. A., and Hopkins, N. (1990). Alignment of U3 region sequences of mammalian type C viruses: Identification of highly conserved motifs and implications for enhancer design. J. Virol. 64, 534-542.
11. Gottschalk, L. R., and Leiden, J. M. (1990). Identification and func-tional characterization of the human T-cell receptor fi gene tran-scriptional enhancer: Common nuclear proteins interact with the transcriptional regulatory elements of the T-cell receptor a and ? genes. Mol. Cell. Biol. 10, 5486-5495.
12. Guo, L.-H., and Wu, R. (1983). Exonuctease III: Use for DNA se-quence analysis and in specific deletions of nucleotides. Methods Enzymol. 100, 60-96.
13. Harrison, S. C. (1991). A structural taxonomy of DNA-binding do-mains. Nature 353, 715-719.
14. Ho, I.-C., Yang, L.-H., Morle, G., and Leiden, J. M. (1989). A T-cell- specific transcriptional enhancer element 3’ of Ca in the human T-cell receptor a locus. Proc. Natl. Acad. Sci. USA 86, 6714-6718.
15. Jacobs, K. A., Rudersdorf, R., Neill, S. D., Dougherty, J. P., Brown, E. L., and Fritsch, E. F. (1988). The thermal stability of oligonucleo-tide duplexes is sequence independent in tetraalkylammonium salt solutions: Application to identifying recombinant DNA clones. Nucleic Acids Res. 16, 4637-4650.
16. Johnson, P. F., and McKnight, S. L. (1989). Eukaryotic transcrip-tional regulatory proteins. Annu. Rev. Biochem. 58, 799-839.
17. Jones, N. C., Rigby, P. W. J., and Ziff, E. B. (1988). Jans-acting protein factors and the regulation of eukaryotic transcription: Les-sons from studies on DNA tumor viruses. Genes Dev. 2, 267-281.
18. Kamachi, Y., Ogawa, E., Asano, M., Ishida, S., Murakami, Y., Satake, M., Ito, Y., and Shigesada, K. (1990). Purification of a mouse nu-clear factor that binds to both the A and B cores of the polyoma-virus enhancer. J. Virol. 64, 4808-4819.
19. Kania, M. A., Bonner, A. S., Duffy, J. B., and Gergen, J. P. (1990). The Drosophila segmentation gene runt encodes a novel nuclear regulatory protein that is also expressed in the developing nervous system. Genes Dev. 4, 1701-1713.
20. Kappes, D. J., Browne, C. P., and Tonegawa, S. (1991). Identification of a T-cell-specific enhancer at the locus encoding T-cell antigen receptor 7 chain. Proc. Natl. Acad. Sci. USA 88, 2204-2208.
21. Kemp, B. E., and Pearson, R. B. (1990). Protein kinase recognition sequence motifs. Trends Biochem. Sci. 15, 342-346.
22. Kozak, M. (1989). The scanning model for translation: An update. J. Cell Biol. 108, 229-241.
23. Krimpenfort, P., de Jong, R., Uematsu, Y., Dembic, Z., Ryser, S., von Boehmer, H., Steinmetz, M., and Berns, A. (1988), Transcription of T cell receptor /3-chain genes is controlled by a downstream regulatory element. EMBOJ. 7, 745-750.
24. Kryszke, M. H., Piette, J., and Yaniv, M. (1987). Induction of a factor that binds to the polyomavirus A enhancer on differentiation of embryonal carcinoma cells. Nature (London) 328, 254-256.
25. Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature (London) 227, 680-685.
26. Lake, R. A., Wotton, D., and Owen, M. J. (1990). A 3’transcriptional enhancer regulates tissue-specific expression of the human CD2 gene. EMBOJ. 9, 3129-3136.
27. Mead, D. A., Skorupa, E. S., and Kemper, B. (1985). Single-stranded DNA “Blue” T7 promoter plasmids: A versatile tandem promoter system forcloning and protein engineering. Nucleic Acids Res. 13, 1103-1118.
28. Mitchell, P. J., Wang, C., and Tjian, R. (1987). Positive and negative regulation of transcription in vitro: Enhancer-binding protein AP-2 is inhibited by SV40 T antigen. Ceil 50, 847-861.
29. Miyoshi, H., Shimizu, K., Kozu, T., Maseki, N., Kaneko, Y., and Ohki, M. (1991). (8;21) breakpoints on chromosome 21 in acute my-eloid leukemia are clustered within a limited region of a single gene, AML1. Proc. Natl. Acad. Sci. USA 88, 10431-10434.
30. Ogawa, E., Maruyama, M., Kagoshima, H., Inuzuka, M., Lu, J., Sa-take, M., Shigesada, K., and Ito, Y. PEBP2/PEA2 represents a new family of transcription factor homologous to the products of the Drosophila runt and the human AML1. Proc. Natl. Acad. Sci. USA, in press.
31. Okayama, H., Kawaichi, M., Brownstein, M., Lee, F., Yokota, T., and Arai, K. (1987). High effciency cloning of full-length cDNA libraries for mammalian cells. In “Methods in Enzymology” (R. Wu and L. Grossman, Eds.), Vol. 154, pp. 3-28. Academic Press, San Diego.
32. Piette, J., and Yaniv, M. (1987). Two different factors bind to the alpha domain of the polyomavirus enhancer, one of which also interacts with the SV40 and c-fos enhancers. EMBO J. 6, 1331-1337.
33. Redondo, J. M., Pfohl, J. L., and Krangel, M. S. (1991). Identifica-tion of an essential site for transcriptional activation within the human T-cell receptor enhancer. Mol. Cell. Biol. 11, 5671-5680.
34. Rosenberg, A. H., Lade, B. N., Chui, D.-S., Lin, S.-W., Dunn, J. J., and Studier, F. W. (1987). Vectors for selective expression of cloned DNA by T7 RNA polymerase. Gene 56, 125-135.
35. Satake, M., Ibaraki, T., and Ito, Y. (1988). Modulation of polyoma-virus enhancer binding proteins by Ha-ras oncogene. Oncogene 3, 69-78.
36. Satake, M., Ibaraki, T., Yamaguchi, Y., and Ito, Y. (1989). Loss of responsiveness of an AP1-related factor, PEBP1, to 12-O-tetradec- anoylphorbol-13-acetate after transformation of NIH3T3 cells by the Ha-ras oncogene. J. Virol. 63, 3669-3677.
37. Satake, M., Inuzuka, M., Shigesada, K., Oikawa, T., and Ito, Y. (1992). Differential expression of polyomavirus and murine leuke-mia virus enhancer core binding protein, PEBP2, in various hema-topoietic cells. Jpn. J. Cancer Res. 83, 714-722.
38. Shigesada, K., Itamura, S., Kato, M., Hatanaka, M., Imai, M., Ta-naka, M., Masuda, N., Nagai, J., and Nakashima, K. (1987). Con-struction of a new plasmid vector that can express cloned cDNA in all translational reading frames. Gene 53, 163-72.
39. Smith, C. W. J., Patton, G. J., and Nadal-Ginard, B. (1989). Alterna-tive splicing in the control of gene expression. Annu. Rev. Genet. 23, 527-577.
40. Speck, N. A., Renjifo, B., and FIopkins, N. (1990). Point mutations in the Moloney murine leukemia virus enhancer identify a lymphoid- specific viral core motif and 1, 3-phorbol myristate acetate-induc-ible element. J. Virol. 64, 543-550.
41. Studier, F. W., and Moffat, B. A. (1986). Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J. Mol. Biol. 189, 113-130.
42. Thompson, C. C., Brown, T. A., and McKnight, S. L. (1991). Conver-gence of Ets-and Notch-related structural motifs in a heteromeric DNA binding complex. Science 253, 762-768.
43. Wiederrecht, G., Seto, D., and Parker, C. S. (1988). Isolation of the gene encoding the S. cerevisiae heat shock transcription factor. Cell 54, 841-853.
44. Wilkinson, J. M. (1986). “Fragmentation of polypeptides by enzy-matic methods in practical protein chemistry-A hand book,” pp. 122-148. Wiley, Sons, New York.
45. Zelent, A., Mendelsohn, C., Kastner, P., Krust, A., Garnier, J. M., Ruffenach, F., Leroy, P., and Chambon, P. (1991). Differentially expressed isoforms of the mouse retinoic acid receptor ¡S are gen-erated by usage of two promoters and alternative splicing. EMBO J. 10, 71-82.
46. Zu, Y., Shigesada, K., Nishida, E., Kubota, I., Kohno, M., Hanaoka, M., and Namba, Y. (1990). 65-kilodalton protein phosphorylated by interleukin 2 stimulation bears two putative actin-binding sites and two calcium-binding sites. Biochemistry 29, 8319-8324.