A mechanism for deletion formation in DNA by human cell extracts: The involvement of short sequence repeats

Nucleic Acids Research

Volumn 20, Issue 23, 1992, Pages 6183-6188

  Thacker, John ^a   Chalk, Jeremy ^a   Ganesh, Anil ^a   North, Phillip ^a  

^a MEDICAL RESEARCH COUNCIL   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ATAXIA; ATAXIA TELANGIECTASIA;

CELL EXTRACT; DOUBLE STRANDED DNA; REPETITIVE DNA;

ARTICLE; DNA FLANKING REGION; DNA REPAIR; DNA SEQUENCE; DNA STRAND BREAKAGE; ESCHERICHIA COLI; GENE DELETION; GENETIC RECOMBINATION; HUMAN; HUMAN CELL; MODEL; PRIORITY JOURNAL;

ATAXIA TELANGIECTASIA; BASE SEQUENCE; CELL EXTRACTS; CELL LINE; DNA; DNA REPAIR; HUMAN; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; POLYMERASE CHAIN REACTION; REPETITIVE SEQUENCES, NUCLEIC ACID; SEQUENCE ANALYSIS, DNA; SEQUENCE DELETION; SUPPORT, NON-U.S. GOV'T;

EID: 0027074470     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/20.23.6183     Document Type: Article

References (58)

1. Shortle, D., Grisafi, P., Benkovic, S.J. and Botstein, D. (1982) Proc Nall. Acad. Sd. USA. 79, 1588-1592.
2. Kuchino, Y., Mori, F., Kasai, H., Inoue, J.L, Iwai, I.S., Miura, K., Ohtsuka, E., and Nishimura, S. (1987) Nature 327, 77 - 79.
3. Ide, H., Perniilo, L.A., Hatahet, Z., and Wallace, S.S. (1991)J. Biol. Chem. 266, 1469-1477
4. Basu, A.K., Loechler, E.L, Leadon, S.A., and Essigmann, J.M. (1989) Proc. Nall. Acad. Sci. USA. 86, 7677 - 7681.
5. Lawrence, C.W., Borden, A., Baneijee, S.K., Leclerc, J.E. (1990) Nucleic Adds Res. 18, 2153-2157.
6. Leclerc, J.E., Borden, A., and Lawrence, C.W. (1991) Proc. Natl. Acad Sci. USA 88, 9685 -9689.
7. Kow, Y.W., Faundez, G., Melamede, R.J., and Wallace, S.S. (1991) Radiai. Res. 126, 357 - 366
8. Thacker, J. (1986) Mutation Res. 160, 267—275.
9. Urlaub, G., Mitchell, P. J., Kas, E., Chasin, L.A., Funanage, V.L., Myoda, T.T., and Hamlin, J. (1986) Somat. CellMolec. Genet. 12, 555—566.
10. Isom, H., Kitchingman, G., Roy-Burman, P., Fausto, N., and Padarathsingh, M. (1991) Cancer Res. 51, 5440 -5444.
11. Cooper, D.N. Schmidtke, J. (1989) Hum. Genet. 83, 307 - 334.
12. Albertini, A.M., Hofer, M., Calos, M.P., and Miller, J.H. (1982) Cell 29, 319-328.
13. Vanin, E.F., Henthom, P.S., Kioussis, D., Grosvekl, F., and Smithies, O. (1983) Cell 35, 701-709.
14. Glickman, B.W., and Ripley, L.S. (1984) Proc. Natl. Acad. Sd. USA 81, 512-516.
15. Bae, Y-S., Kawasaki, I., Ikeda, H., and Liu, L.F. (1988) Proc. Natl. Acad Sd. USA. 85, 2076 -2080
16. Conley, E.C.Saunders, V.A., Jackson, V., and Saunders, J.R. (1986) Nucleic Acids Res. 14, 8919 - 8932.
17. North, P., Ganesh, A., and Thacker, J. (1990) Nucleic Acids Res. 18, 6205 -6210.
18. Cox, R., Debenham, P.G., Masson, W.K., and Webb, M.B.T. (1986) Mol. Biol. Med 3, 229 - 244.
19. Thacker, J. (1989) Mutation Res. 220, 187 -204.
20. Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, Cold Spring Harbor, New York.
21. Day, R.S., ZioJkowski, C.H.J., Scudiero, D.A., Meyer, S.A., Lubiniecki, A.S., Giradi, A.J., Galloway, S.M., and Bynum, G.D. (1980) Nature 288, 724 -727.
22. Huschtscha, L.L, and Holliday, R. (1983). JCell Sd. 63, 77-99.
23. Hanahan, D. (1985) In Glover, D.M. (ed.) DNA Cloning, IRL Press, Oxford. Vol.I, pp. 109-135.
24. Hultman, T., Stahl, S., Homes, E., and Uhlen, M. (1989) Nucleic Acids Res. 17, 4937 -4946.
25. Farabaugh, P.J., Schmeissner, U., Hofer, M., and Miller, J.H. (1978)J. Mol. BioL 126, 847 - 857.
26. Marvo, S.L., King, S.R., and Jaskunas, S.R. (1983) Proc. NatL Acad Sd. USA. 80, 2452 -2456.
27. Bien, M., Steffen, H., and Schulte-Frohlinde, D. (1988) Mutation Res. 194, 193 - 205.
28. Mazin, A.V., Kuzminov, A.V., Dianov, G.L., and Salganik, R.I. (1991) Mol. Gen. Genet. 228, 209 -214.
29. Pastink, A., Vree ken, C., Schalet, A.P., and Eeken, J.C.J. (1988) Mutation Res., 207, 23-28.
30. Ruley, H.E., and Fried, M. (1983) Nature 304, 181-184.
31. Hogan, A., and Faust, E.A. (1986) Mol. Cell. BioL 6, 3005 - 3009.
32. Roth, D.B., Porter, T.N., and Wilson, J.H. (1985) Mol. Cell. BioL 5, 2599 - 2607.
33. Pathak, V.K., and Temin, H.M. (1990) Proc. NatL Acad Sd. USA. 87, 6024 - 6028.
34. Nalbantoglu, J., Hartley, D., Phear, G., Tear, G., and Meuth, M. (1986) EMBO 7. 5, 1199-1204.
35. Grosovsky, A.J., de Boer, J.G., de Jong, P.J., Drobetsky, E.A., and Glickman, B.W. (1988) Proc. Natl. Acad Sa. USA. 85, 185-188.
36. Morris, T., and Thacker, J. (1992) Proc. NatL Acad Sd. USA, in press.
37. Canning, S. and Dryja, T.P. (1989) Proc. Natl. Acad Sd. U.S.A. 86, 5044 - 5048.
38. Heahom, P.S., Smithies, O., and Mager, D.L. (1990) Genomics 6, 226 —237.
39. Komreich, R., Bishop, D.F. and Desnick, R.J. (1990) J. BioL Chem. 265, 9319 -9326.
40. Mita, S., Rizzuto, R., Morses, C.T., Shanske, S., Amaudo, E., Fabrizi, G.M., Koga, Y., DiMauro, S., and Schon, E.A. (1990) Nucleic Acids Res. 18, 561-567.
41. Woods-Samuels, P., Kazazian, H.H., and Antonarakis, S.E. (1991) Genomics 10, 94-101.
42. Love, D.R., England, S.B., Speer, A., Marsden, R.F., Bloomfield, J.F., Roche, A.L., Cross, G.S., Mountford, R.C., Smith, T.J., and Davies, K.E. (1991) Genomics 10, 57-67.
43. Sperry, A.O., Blasquez, V.C. and Garrard, W.T. (1989) Proc. NatL Acad. Sd. USA 86, 5497 - 5501.
44. Lin, F-L., Sperie, K., and Stembag, N. (1984) MoL CelL Biol. 4, 1020-1034.
45. Wake, C.T., Vernaleone, F., and Wilson, J.H. (1985) Mol. Cell. BioL 5, 2080 -2089.
46. Roth, D.B., and Wilson, J.H. (1986) Mol. CelL BioL, 6, 4295 -4304.
47. Pfeiffer, P. and Vielmetter, W. (1988) Nucleic Acids Res., 16, 907 -924.
48. Folger, K.R., Thomas, K., and Capecchi, M.R. (1985) Mol. Cell. Biol. 5, 70 - 74.
49. Brown, T.C., and Jiricny, J. (1988) Cell 54, 705 - 711.
50. Kanya, Y., Kato, K., Hayashizaki, Y., Himeno, S., Tanii, S., and Malsubara, K. (1987) Gene 53, 1-10.
51. Spitzner, J.R., and Muller, M.T. (1989) J. Mol. Recog. 2, 63-74.
52. Davies, S.M., Harris, A.L., and Hickson, I.D. (1989) Nucleic Adds Res. 17, 1337-1351.
53. Smith, P.J., and Makinon, T.A. (1989) Cancer Res. 49, 1118—1124.
54. Resnick, M.A. (1976) J. Theor. BioL 59, 97-106.
55. Szostak, J.W., Orr-Weaver, T.L., Rothstein, RJ., and Stahl, F.W. (1983) Cell 33, 25-35.
56. Fotheringham, S., and Holloman, W.K. (1991) Genetics 129, 1053-1060.
57. Hendrickson, E.A., Qin, X-Q., Bump, E.A., Schatz, D.G., Oettinger, M., and Weaver, D.T. (1991) Proc. Natl. Acad. Sd. USA 88, 4061-4065.
58. Biedermann, K.A., Sun, J., Giaccia, A.J., Tosto, L.M., and Brown, J.M. (1991) Proc. NatL Acad Sd. USA. 88, 1394-1397.