REAP: An Integrated Environment for the Manipulation and Phylogenetic Analysis of Restriction Data

Journal of Heredity

Volumn 83, Issue 2, 1992, Pages 157-158

  McElroy, D ^a   Moran, P ^a   Bermingham, E ^b   Kornfield, I ^a  

^a UNIVERSITY OF MAINE   (United States)

^b SMITHSONIAN TROPICAL RESEARCH INSTITUTE   (Panama)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER PROGRAM; PHYLOGENY; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

PHYLOGENY; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; SOFTWARE;

EID: 0026828398     PISSN: 00221503     EISSN: 14657333     Source Type: Journal    
DOI: 10.1093/oxfordjournals.jhered.a111180     Document Type: Article

References (12)

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3. Kimura M, 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
4. NeiM, 1987. Molecular evolutionary genetics. New York: Columbia University Press.
5. Nei M and Li WH, 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 76:5269-5273.
6. Nei M and Miller JC, 1990. A simple method for estimating average number of nucleotide substitutions within and between populations from restriction data. Genetics 125:873-879.
7. Nei M and Tajima F, 1981. DNA polymorphism detectable by restriction endonucleases. Genetics 97:145163.
8. Nei M and Tajima F, 1983. Maximum likelihood estimation of the number of nucleotide substitutions from restriction site data. Genetics 105:207-217.
9. 2and the problem of small samples. Mol Biol Evol 6:539-545.
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11. Swofford DL, 1985. PAUP, Phylogenetic Analysis Using Parsimony, version 2. 4. Champaign: Illinois Natural History Survey.
12. Upholt WB, 1977. Estimation of DNA sequence divergence from comparison of restriction endonuclease digests. Nucleic Acids Res 4:1257-1265.