The β globin gene cluster of the prosimian primate Galago crassicaudatus: Nucleotide sequence determination of the 41-kb cluster and comparative sequence analyses

Genomics

Volumn 13, Issue 3, 1992, Pages 741-760

  Tagle, Danilo A ^a   Stanhope, Michael J ^a   Siemieniak, David R ^b   Benson, Philip ^a   Goodman, Morris ^a   Slightom, Jerry L ^a,b  

^a WAYNE STATE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b PFIZER INC   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BETA GLOBIN;

AMINO ACID SEQUENCE; ARTICLE; DNA FOOTPRINTING; EVOLUTION; GENE CLUSTER; GENE STRUCTURE; NONHUMAN; NUCLEOTIDE SEQUENCE; PROSIMIAN;

AMINO ACID SEQUENCE; ANIMAL; BASE COMPOSITION; BASE SEQUENCE; CHROMOSOME MAPPING; COMPARATIVE STUDY; DNA; EVOLUTION; GALAGO; GLOBINS; HUMAN; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; RABBITS; REPETITIVE SEQUENCES, NUCLEIC ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; SUPPORT, NON-U.S. GOV'T; SUPPORT, U.S. GOV'T, NON-P.H.S.; SUPPORT, U.S. GOV'T, P.H.S.;

GALAGO; ORYCTOLAGUS CUNICULUS; OTOLEMUR CRASSICAUDATUS; PRIMATES; STREPSIRHINI;

EID: 0026752871     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/0888-7543(92)90150-Q     Document Type: Article

References (87)

1. Molecular evolution of the ψη-globin gene locus: Gibbon phylogeny and hominoid slowdown
2. The DNA sequence of the human β-globin region is strongly biased in favor of long strings of contiguous purine or pyrimidine residues
3. Linker scanning mutagenesis of the 5′ flanking region of the mouse β-major gene: Sequence requirements for transcription in erythroid and nonerythroid cells
4. The molecular genetics of human hemoglobins
5. Phylogenetic origins and adaptive evolution of avian and mammalian haemoglobin genes
6. A second major class of Alu family repeated sequences in a primate genome
7. Repeat sequence families derived from mammalian tRNA genes
8. Characterization of a third major SINE family of repetitive sequences in the galago genome
9. Species-specific homogeneity of the primate Alu family of repeated DNA sequences
10. Cell-type specific protein binding to enhancer of simian virus 40 in nuclear extracts
11. A comprehensive set of sequence analysis programs for the VAX
12. The structure and evolution of the human β-globin gene family
13. Recognition of protein coding regions in DNA sequences
14. The spider monkey ψη-globin gene and surrounding sequences: Recent or ancient insertion of LINEs and SINEs?
15. The 5′ flanking sequences of human globin genes contribute to tissue specific expression
16. Evidence for a locus activation region: The formation of developmentally stable hypersensitive sites in globin expressing hybrids
17. A developmentally stable chromatin structure in the human β-globin gene cluster
18. β
19. The η-globin gene: Its long evolutionary history in the β-globin gene family of mammals
20. Pattern and process in vertebrate phylogeny revealed by coevolution of molecules and morphology
21. γ-Globin gene regulation: Evolutionary approaches
22. Characterization of genomic poly(dT-dG) · poly(dC-dA) sequences: Structure, organization, and conformation
23. Evolution of the mammalian β-globin cluster
24. Comparison of the β-like globin gene families of rabbits and humans indicates that the gene cluster 5′ε-γ-δ-β-3′ predates the mammalian radiation
25. The structure and transcription of four linked rabbit β-like globin genes
26. The primate ψβ1 gene: An ancient β-globin pseudogene
27. Nucleotide sequence analysis of the lemur β-globin gene family: Evidence for major rate fluctuations in globin polypeptide evolution
28. L1 family of repetitive DNA sequences in primates may be derived from a sequence encoding a reverse transcriptase-related protein
29. Two mouse early embryonic β-globin gene sequences
30. A space efficient algorithm for local similarities
31. Partial overlapping of binding sequences for steroid hormone receptors and DNaseI hypersersitive sites in rabbit uteroglobin gene region
32. Evolution of protein molecules
33. Subfamily structure and evolution of the human L1 family of repetitive sequences
34. Characterization of DNA sequences through which cadmium and glucocorticoid hormones induce human metallothionein-IIA gene
35. Aγ-, β- and hybrid γβ-globin genes in transgenic mice: Manipulation of the developmental expression patterns
36. M) of opossum
37. Primate η-globin DNA sequences and man's place among the great apes
38. A molecular view of primate phylogeny and important systematic and evolutionary questions
39. IS 186: An Escherichia coli insertion element isolated from a cDNA library
40. Purified transcription factor AP-1 interacts with TPA-inducible enhancer elements
41. Tissue-specific expression of the human growth hormone gene is conferred in part by the binding of a specific transacting factor
42. Slipped-strand mispairing: A major mechanism for DNA sequence evolution
43. Nucleotide sequence of 16-kilobase pairs of DNA 5′ to the human ε-globin gene
44. Primary Structure of the Goat β-Globin Locus Control Region
45. Nucleotide sequence of 7S RNA: Homology to Alu DNA and LA 4.5S RNA
46. Rapid and sensitive protein similarity searches
47. Molecular evolution of intergenic DNA in higher primates: Pattern of DNA changes, molecular, clock, and evolution of repetitive sequences
48. Regulation of inducible and tissue-specific gene expression
49. Complete nucleotide sequence of the rabbit β-like globin gene cluster: Analysis of intergenic sequences and comparison with the human β-like globin gene cluster
50. Repetitive satellite-like sequences are present within or upstream from 3 avian protein-coding genes
51. Sequencing end-labeled DNA with base-specific chemical cleavage
52. Phylogenetic relations of humans and African apes from DNA sequences in the ψη-globin region
53. A general method applicable to the search for similarities in the amino acid sequence of two proteins
54. Simple methods for estimating numbers of synonymous and nonsynonymous nucleotide substitutions
55. (AGCTG) (AGCTG) (AGCTG) (GGGTG) as the primordial sequence of intergenic spacers: The role in immunoglobulin class switch
56. Gγ-globin gene intergenic region: Sequence analysis and concerted evolution within this family
57. Analysis of rabbit β-like globin gene transcripts during development
58. DNA sequencing with chain-terminating inhibitors
59. Nucleotide sequence of the δ-β-globin intergenic segment in the macaque: Structure and evolutionary rates in higher primates
60. Evolution of the primate β globin gene region: High rate of variation in CpG dinucleotides and in short repeated sequences between man and chimpanzee
61. Evolution of Alu family repeats since the divergence of human and chimpanzee
62. Software tools for analyzing pairwise alignments of long sequences
63. Origin of the human L1 elements: Proposed progenitor genes deduced from a consensus DNA sequence
64. The silent carrier allele: Beta-thalassemia without a mutation in the beta-globin gene or its immediate flanking regions
65. II β-globin genes
66. Nucleotide sequence of the BALBc mouse β-globin complex
67. Aγ-globin genes: Complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes
68. Identification of common molecular subsequences
69. Molecular Evolutionary Genetics of the β Globin Cluster of the Prosimian Primate Galago crassicaudatus: Nucleotide Sequence Determination of the 41 kb Cluster, Developmental Expression Patterns, and Comparative Analyses
70. Embryonic ε and γ globin genes of a prosimian primate (Galago crassicaudatus): Nucleotide and amino acid sequences, developmental regulation, and phylogenetic footprints
71. Concerted evolution led to high expression of a prosimian primate δ globin gene locus
72. Simple DNA sequences of Drosophila virilis isolated by screening with RNA
73. Simple sequences are ubiquitous components of eukaryotic genomes
74. Sequence of inverted terminal repetitions from different adenoviruses: Demonstration of conserved sequences and homology between SA7 termini and SV40 DNA
75. Triplication of a four-gene set during evolution of the goat β-globin locus produced three genes now expressed differentially during development
76. Erythroid-specific expression of human β-globin genes in transgenic mice
77. Locating protein coding regions in human DNA sequences using a multiple sensor—neural network approach
78. Human 7SL RNA consists of a 140 nucleotide middle-repetitive sequence inserted in an Alusequence
79. Codon usage tabulated from the GenBank genetic sequence data
80. A dominant role for DNA secondary structure in forming hypersensitive structures in chromatin
81. Rapid similarity searches of nucleic acid and protein data banks
82. DNA sequences required for regulated expression of β-globin genes in murine erythroleukemia cells
83. Evidence for higher rates of nucleotide substitutions in rodents than in man
84. Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13 mp18 and pUC 18 vectors
85. Purification of KBF1, a common factor binding to both H-2 and β 2-microglobulin enhances