Extension of base mispairs by Taq DNA polymerase: Implications for single nucleotide discrimination in PCR

Nucleic Acids Research

Volumn 20, Issue 17, 1992, Pages 4567-4573

  Huang, Mei mei ^a   Arnheim, Norman ^a   Goodman, Myron F ^a  

^a UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA POLYMERASE; NUCLEOTIDE; PRIMER DNA; RNA DIRECTED DNA POLYMERASE;

ARTICLE; AVIAN MYELOBLASTOSIS VIRUS; BASE MISPAIRING; DNA REPAIR; DNA REPLICATION; ENZYME KINETICS; GENE MUTATION; HUMAN IMMUNODEFICIENCY VIRUS 1; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROTEIN DNA BINDING; TEMPERATURE;

BASE COMPOSITION; BASE SEQUENCE; DNA-DIRECTED DNA POLYMERASE; MOLECULAR SEQUENCE DATA; NUCLEOTIDES; OLIGODEOXYRIBONUCLEOTIDES; POLYMERASE CHAIN REACTION; SUPPORT, U.S. GOV'T, P.H.S.; TAQ POLYMERASE; TEMPERATURE;

AVES; HUMAN IMMUNODEFICIENCY VIRUS 1; THERMUS AQUATICUS;

EID: 0026698636     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/20.17.4567     Document Type: Article

References (29)

1. Saiki, R.K., Scharf, S., Faloona, F., Mullis, K.B., Horn, G.T., Erlich, H.A. & Arnheim, N. (1985) Science 230, 1350-1354.
2. Mullis, K.S. & Faloona, F.A. (1987) Methods in Enzymol. 155, 335-350.
3. Sailei, R.K., Gelfand, D.H., Stoffel, S., Scharf, S., Higuchi, R., Horn, G.T., Mullis, K.B. & Erhch, H.A. (1988) Science 239, 487-491.
4. Ugozzoli, L. & Wallace, R.B. (1991) Methods: Companion Methods Enzymol. 2, 42-48.
5. Wu, D.Y., Ugozzoli, L., Pal, B.K. & Wallace, R.B. (1989) Proc. Natl. Acad. Sci. USA 86, 2757-2760.
6. Newton, C.R., Graham, A., Heptinstall, L.E., Powell, S.J., Summer, C, Kalsheker, N., Smith, J.C. & Markham, A.F. (1989) Nucleic Acid Res. 17, 2503-2516.
7. Gibbs, R.A., Nguyen, P.-N. & Caskey, C.T. (1989) Nucleic Acid Res. 17, 2437-2448.
8. Ehlen, T. & Dubeau, L. (1989) Biochem. Biophys. Res. Commun. 160, 441-447.
9. Li, H., Cui, X. & Amheim, N. (1991) Proc. Natl. Acad. Sci. USA 87, 4580-4584.
10. Gyllensten, U.B. (1989) In Erhch, H.A., ed., PCR Technology: Principles & Applications for DNA Amplifications for DNA Amplification. Stockton Press, New York, pp. 45-60.
11. Amheim, N. & Erlich, H.A. (1992) Annu. Rev. Biochem. 61, 131-156.
12. Erlich, H.A., Gelfand, D. & Sninsky, J. (1991) Science 252, 1643-1651.
13. Petruska, J., Goodman, M.F., Boosalis, M.S., Sowers, L.S., Cheong, C. & Tinoco, I., Jr. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 6252-6256.
14. Perrino, F.W. & Loeb, L.A. (1989) J. Biol. Chem. 264, 2898-2905.
15. Mendelman, L.V., Petruska, J., & Goodman, M.F. (1990) J. Biol. Chem. 265, 2338-2346.
16. Creighton, S., Huang, M.-M., Cai, H., Amheim, N., & Goodman, M.F. (1992) J. Biol. Chem. 267, 2633-2639.
17. Kunkel, T.A. & Alexander, P.S. (1986) J. Biol. Chem. 261, 160-166.
18. Kuchta, R. D., Benkovic, P. & Benkovic, S. J. (1988) Biochemistry 27, 6716-6725.
19. Yu, H. & Goodman, M.F. (1992) J. Biol. Chem. 267, 10888-10899.
20. Longley, M.J., Bennett, S.E. & Mosbaugh, D.W. (1990) Nucleic Acids Res. 18, 7317-7322.
21. Gelfand, D.H. & White, TJ. (1990) in Innis, M.A., Gelfand, D.H., Sninsky, J.J., & White, T.J., eds., PCR Protocols. A Guide to Methods and Applications. Academic Press Inc., San Diego, pp. 129-141.
22. Fisher, P.A. & Kom, D. (1981) Biochemistry 20, 4560-4569.
23. Detera, S.D., Becerra, S.P., Swack, J. A. & Wilson, S.H. (1981) J. Biol. Chem. 256, 6933-6943.
24. Tindall, K.R. & Kunkel, T.A. (1988) Biochemistry 27, 6008-6013.
25. Wong, I., Patel, S.S. & Johnson, K.A. (1991) Biochemistry 30, 526-537.
26. Kwok, S., Kellogg, D.E., McKinny, N., Spasic, D., Goda, L., Levenson, C. & Sninsky, J.J. (1990) Nucleic Acid Res. 18, 999-1005.
27. Mendelman, L.V., Boosalis, M.S., Petruska, J. & Goodman, M.F. (1989) J. Biol. Chem. 264, 14415-14423.
28. Sowers, L.C., Fazakerly, G.V., Kim, H., Dalton, L. & Goodman, M.F. (1986) Biochemistry. 25, 3983-3988.
29. Boulard, Y., Cognet, J.A.H., Gabarro-Arpa, J., Le Bret, M., Sowers, L.C. & Fazakerley, G.V. (1992) Nucleic Acids Res 20, 1933-1941.