The identification and characterization of a break within the large subunit ribosomal RNA of Trichinella spiralis: comparison of gap sequences within the genus

Molecular and Biochemical Parasitology

Volumn 51, Issue 2, 1992, Pages 281-289

  Zarlenga, Dante S ^a   Dame, John B ^b  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b UNIVERSITY OF FLORIDA   (United States)

Author keywords

Expansion segments; Gap excision; Gene cloning; Ribosomal DNA; Ribosomal RNA; rRNA processing; Trichinella spiralis; Trichinellosis

Indexed keywords

RNA;

AMINO ACID SEQUENCE; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; IMMUNOBLOTTING; NONHUMAN; PRIORITY JOURNAL; RIBOSOME; TRICHINELLA SPIRALIS;

ANIMAL; ASPERGILLUS NUCLEASE S1; BASE SEQUENCE; BLOTTING, NORTHERN; BLOTTING, SOUTHERN; COMPARATIVE STUDY; DNA; MOLECULAR SEQUENCE DATA; NUCLEIC ACID CONFORMATION; RESTRICTION MAPPING; RNA, RIBOSOMAL; SEQUENCE HOMOLOGY, NUCLEIC ACID; SPECIES SPECIFICITY; TRICHINELLA;

ANIMALIA; TRICHINELLA NATIVA; TRICHINELLA NELSONI; TRICHINELLA PSEUDOSPIRALIS; TRICHINELLA SPIRALIS;

EID: 0026513262     PISSN: 01666851     EISSN: None     Source Type: Journal    
DOI: 10.1016/0166-6851(92)90078-X     Document Type: Article

References (44)

1. Xenopus laevis 28S ribosomal RNA: a secondary structure model and its evolutionary and functional implications
2. rRNA processing: removal of only nineteen bases at the gap between 28S and 28S rRNAs in Sciara coprophila
3. Evolution of Ribosomal DNA
4. The excision of intervening sequences from Salmonella 23S ribosomal RNA
5. Characterization of a 54 nucleotide gap region in the 28S rRNA gene of Schistosoma mansoni
6. Sequence arrangement of the rDNA of Drosophila melanogaster
7. Late steps in the maturation of Drosophila 26S ribosomal RNA: generation of 5.8S and 2S RNAs by cleavages occurring in the cytoplasm
8. Occurrence in vivo of ‘Hidden breaks’ at specific sites of 26S ribosomal RNA of Musca carnaria
9. Sequence arrangement of the 16S and 26S rRNA genes in the pathogenic haemoflagellate Leishmania donovani
10. Introduction of hidden breaks during rRNA maturation and aging in Tetrahymena pyriformis
11. Discontinuity of 26S rRNA in Acanthamoeba castellani
12. Organization of the ribosomal RNA genes in Schistosoma mansoni
13. Hidden breaks in ribosomal RNA of phylogenetically tetraploid fish and their possible role in the diploidization process
14. Simultaneous isolation of preparative amounts of RNA and DNA from Trichinella spiralis by cesium trifluoroacetate isopycnic centrifugation
15. Trichinella spiralis: genetic evidence for synanthropic subspecies in sylvatic hosts
16. Purification of eukaryotic messenger RNA
17. The arrangement of ribosomal RNA genes in Schistosoma mansoni
18. Two major sequences classes of ribosomal RNA genes in Plasmodium berghei
19. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses
20. Convenient uses of the polymerase chain reaction in analyzing recombinant cDNA clones
21. Improvement of PCR amplified DNA sequencing with the aid of detergents
22. Detection of specific sequences among DNA fragments separated by gel electrophoresis
23. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I
24. Molecular cloning of Trichinella spiralis rRNA genes: application as genetic markers for isolate classification
25. Characterization of the ribosomal DNA from Trichinella spiralis
26. The rDNA of C. elegans: sequence and structure
27. Clustal: a package for performing multiple sequence alignment on a microcomputer
28. Molecular mechanism of introduction of the hidden break into the 28S rRNA of insects: implication based on structural studies
29. Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
30. An algorithm for the display of nucleic acid secondary structure
31. Sequence and secondary structure of the central domain of Drosophila 26S rRNA: A universal model for the central domain of the large rRNA containing the region in which the central break may happen
32. Dissociation of ribosomal ribonucleic acid from silkmoth pupae by heat and dimethyl sulfoxide: evidence for specific cleavage points
33. Sequence analysis of 28S ribosomal DNA from the amphibian Xenopus laevis
34. Yeast ribosomal protein L25 binds to an evolutionary conserved site on yeast 26S and E. coli 23S rRNA
35. Left-handed DNA helices
36. A Z-like form of poly(dA–dC)-poly(dG–dT) in solution
37. A novel repeated element with Z-DNA-forming potential is widely found in evolutionarily diverse eukaryotic genomes
38. n forms left-handed Z-DNA in negatively supercoiled plasmids
39. Agamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes
40. DNA sequence homology and chromosomal deletion at a site of SV 40 DNA integration
41. The structure of a human alpha-globin pseudogene and its relationship to alpha-globin gene duplication
42. Transposable elements in prokaryotes