An investigation of protein subunit and domain interfaces

Protein Engineering, Design and Selection

Volumn 2, Issue 2, 1988, Pages 101-113

  Argos, Patrick ^a  

^a EUROPEAN MOLECULAR BIOLOGY LABORATORY   (Germany)

Author keywords

Domains; Protein association; Protein interfaces; Protein structure; Subunits

Indexed keywords

AMINO ACID; PROTEIN;

ARTICLE; CHEMISTRY; INFORMATION SYSTEM; PROTEIN CONFORMATION; SOLUBILITY; SURFACE PROPERTY;

AMINO ACIDS; CHEMISTRY; INFORMATION SYSTEMS; PROTEIN CONFORMATION; PROTEINS; SOLUBILITY; SURFACE PROPERTIES;

EID: 0024046505     PISSN: 17410126     EISSN: None     Source Type: Journal    
DOI: 10.1093/protein/2.2.101     Document Type: Article

References (58)

1. Adman, E.T., Sieker, L.C. and Jensen, L.H. (1973) J. Biol. Chem., 248, 3987-3996.
2. Ahem, T.J., Casal, J., Petsko, G.A. and Klibanov, A.M. (1987) Proc. Natl. Acad. Sci. USA, 84, 675-679.
3. Argos, P. (1987) J. Mol Biol., 193, 385-396.
4. Baker, E.N. (1980) J. Mol Biol., 141, 441-484.
5. Bergsma, J., Hol, W.G.J., Jansonius, J.N., Kalk, J.H., Ploegman, J.H. and Smit, J.D.G. (1975) J. Mol. Biol, 98, 637-643.
6. Bemstein, F.C., Koetzle, T.F., William, G.J.B., Meyer, E.F., Jr., Brice, M.D., Rodgers, J.R., Kennard, O., Shimanouchi, T. and Tasumi, M. (1977) J. Mol. Biol., 112, 532-542.
7. Birktoff, J.J. and Blow, D.M. (1972) J. Mol. Biol., 68, 187-240.
8. Blevins, R.A. and Tulinsky, A. (1985) J. Biol. Chem., 260, 4264-4275.
9. Brayer, G.D., Delbaere, L.T.J. and James, M.N.G. (1978) J. Mol. Biol., 124, 261-283.
10. Brayer, G.D., Delbaere, J.T.J. and James, M.N.G. (1979) J. Mol. Biol., 131, 743-775.
11. Chothia, C. (1976) J. Mol. Biol., 105, 1-14.
12. Colman, P.M., Jansonius, T.N. and Matthews, B.W. (1972) J. Mol. Biol., 70, 701-724.
13. Dalzoppo, D., Vita, C. and Fontana, A. (1985) J. Mol. Biol., 182, 331-340.
14. Dautry-Varsat, A. and Garc, U.R. (1981) Biochemistry, 20, 1396-1401.
15. Drenu, V., Jansonius, J.N., Kolkoek, R. and Walters, B.G. (1971) Adv. Protein Chem., 25, 79-115.
16. Gilliland, G.L. and Quiccho, F.A. (1981) J. Mol. Biol., 146, 341-362.
17. Harder, R.L. and Desmarais, R.N. (1972) J. Aircraft, 9, 189-191.
18. Högberg-Raibaud, A. and Goldberg, M.E. (1977) Biochemistry, 16, 4014-4020.
19. Holbrook, J., Liljas, A., Steindel, S.J. and Rossmann, M.G. (1975) In Boyer, P.D. (ed.), The Enzymes. Academic Press, New York, Vol. XI, part A, pp. 191-292.
20. Honzatko, R.B., Crawford, J.L., Monaco, H.L., Ladner, J.E., Edwards, B.F.P., Evans, D.R., Warren, S.G., Wiley, D.C., Ladner, R.C. and Lipscomb, W.N. (1982) J. Mol. Biol., 160, 219-263.
21. Jaenicke, R. (1984) Angew. Chem. Int. Ed. Engt., 23, 395-413.
22. Kabsch, W. and Sander, C. (1983) Biopofymers, 22, 2577-2637.
23. Kretsinger, R.H. (1972) Nature (New Biol.), 240, 85-88.
24. Ladenstein, R., Epp, O., Bartcls, K., Jones, A. and Huber, R. (1979) J. Mol Biol., 134, 199-218.
25. Manavalan, P. and Ponnuswamy, P.K. (1978) Nature, 275, 673-674.
26. Meingue, U. (1979) J. Appl. Math. Phys., 30, 292-304.
27. Miller, S., Lesk, A.M., Janin, J. and Chothia, C. (1987) Nature, 328, 834-836.
28. Monod, J., Wyman, J. and Changeux, J.-P. (1965) J. Mol. Biol, 12, 88-118.
29. Morgan, R.S., Miller, S.L. and McAdon, J.M. (1979) J. Mol Biol, 15, 31-39.
30. Murthy, M.R.N., Reid, T.J., III, Sicignano, A., Tanaka, N. and Rossmann, M.G. (1981) J. Mol. Biol. 152, 465-499.
31. Musick, W.D.L. and Rossmann, M.G. (1979) J. Biol. Chem., 254, 7611-7623.
32. Narayana, S.V.L. and Argos, P. (1984) Int. J. Peptide Protein Res., 24, 25-39.
33. Olson, A.J., Bricogne, G. and Harrison, S.C. (1983) J. Mol Biol, 171, 61-93.
34. Opitz, U., Rudolph, R., Jaenicke, R., Ericsson, L. and Neurath, H. (1987) Biochemistry, 26, 1399-1406.
35. Palau, J., Argos, P. and Puigdomenech, P. (1982) Int. J. Protein Peptide Res., 91, 394-401.
36. Poulos, T.L. and Kraut, J. (1980) J. Biol. Chem., 255, 10322-10330.
37. Remington, S.J., Anderson, W.F., Owen, J., Ten Eyck, L.F., Grainger, C.T. and Matthews, B.W. (1978) J. Mol. Biol, 118, 81-98.
38. Remington, S J., Wiegand, G. and Huber, R. (1982) J. Mol. Biol, 158, 111-152.
39. Rossmann, M.G. and Argos, P. (1981) Annu. Rev. Biochem., 50, 497-532.
40. Rossmann, M.G., Liljas, A., Branden, C. and Banaszak, L.J. (1975) In Boyer, P.D. (ed.), The Enzymes. Academic Press, New York, Vol. XI, pp. 61-102.
41. Rossmann, M.G., Abad-Zapatero, C., Hermodson, M.A. and Erickson, J.W. (1983) J. Mol. Biol, 166, 37-83.
42. SAS/GRAPH User’s Guide (1985) SAS Institute Inc., Cary, NC, Version 5 Edition, pp. 413-424.
43. Savithri, H.A. and Erickson, J.W. (1983) Virology, 126, 328-335.
44. Sawyer, L., Shotton, D.M., Campbell, J.W., Wende, U.P.L., Muirhead, H. and Watson, H.C. (1978) J. Mol. Biol, 118, 137-208.
45. Schirmer, T., Huber, R., Schneider, M., Bode, W., Müler, M. and Hackert, M.L. (1986) J. Mol. Biol, 188, 651-676.
46. Schulz, G.E., Schirmer, R.H., Sachsenheimer, W. and Pai, E.F. (1978) Nature, 273, 120-124.
47. Smota, T., Johnson, L.N., North, A.C.T., Philips, D.C. and Rupley, J.A. (1972) In Boyer, P.D. (ed.), The Enzymes. Academic Press, New York, Vol. VII, pp. 665-868.
48. Szebenyi, D.M.E., Obendorf, K. and Moffat, K. (1981) Nature, 294, 327-332.
49. Tang, J., James, M.N.G., Hsu, I.N., Jcnkms, J.A. and Blundell, T.L. (1978) Nature, 271, 618-621.
50. Ward, W.H.J., Jones, D.H. and Fersht, A.R. (1987) Biochemistry, 26, 4131-4138.
51. Watson, H.C., Walker, N.P.C., Shaw, P.J., Bryant, T.N., Wendell, P.L., Fothergill, L.A., Perkins, R.E., Conroy, S.C., Dobson, M.J., Tuite, M.F., Kingsman, A.J. and Kingsman, S.M. (1982) EMBOJ., 1, 1635-1640.
52. Wetlaufer, D.B. (1981) Adv. Protein Chem., 34, 61-92.
53. Wilson, I.A., Skehe, U.J. and Wiley, D.C. (1981) Nature, 289, 366-373.
54. Wistow, G., Tumcll, B., Summers, L., Slingsby, C, Moss, D., Müller, L., Lindley, P. and Blundell, T.L. (1983) J. Mol. Biol, 170, 175-202.
55. Wlodawer, A., Deisenhofer, J. and Huber, R. (1987) J. Mol Biol., 193, 145-146.
56. Wright, C.S. (1977) J. Mol. Biol, 111, 439-457.
57. Wright, C.S., Alden, R.A. and Kraut, J. (1969) Nature, 221, 235-242.
58. Zielenkiewkz, P. and Rabczenko, A. (1984) J. Theor. Biol, 111, 17-30.