Restriction endonuclease map of pti bo542, a potential ti plasmid vector for genetic engineering of plants

Bio/Technology

Volumn 2, Issue 8, 1984, Pages 702-709

  Hood, Elizabeth E ^a   Jen, George ^a   Kayes, Lucy ^a   Kramer, Julie ^a   Fraley, Robert T ^b   Chilton, Mary Dell ^c  

^a WASHINGTON UNIVERSITY   (United States)

^b MONSANTO COMPANY   (United States)

^c Ciba Geigy Corporation   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

OCTOPINE;

CLONING VECTOR; GENE MAPPING; GENETIC ENGINEERING; HEREDITY; NONHUMAN; PLASMID; RHIZOBIUM RADIOBACTER;

AGROBACTERIUM TUMEFACIENS;

EID: 0021703827     PISSN: 0733222X     EISSN: None     Source Type: Journal    
DOI: 10.1038/nbt0884-702     Document Type: Article

References (75)

1. Smith, E. F. and Townsend, C. O. 1907. A plant tumor of bacterial origin. Science 25:671-673.
2. Zaenen, I., Van Larebeke, N., Teuchy, H., Van Montagu, M. and Schell, J. 1974. Supercoiled circular DNA in crown-gall inducing Agrobacterium strains. J. Mol. Biol. 86:109-127.
3. Van Larebeke, N., Engler, G., Holsters, M., Van den Elsacker, S., Zaenen, I., Schilperoort, R. A. and Schell, J. 1974. Large plasmid in Agrobacterium tumefaciens essential for crown gall-inducing ability. Nature 252:169-170.
4. Van Larebeke, N., Genetello, C, Schell, J., Schilperoort, R., Hermans, A., Hernalsteens, J. P. and Van Montagu, M. 1975. Acquisition of tumor-inducing ability by non-oncogenic agrobacteria as a result of plasmid transfer. Nature 255:742-743.
5. Watson, B., Currier, T., Gordon, M., Chilton, M.-D. and Nester, E. 1975. Plasmid required tor virulence of Agrobacterium tumefaciens. J. Bacteriol. 123:255-264.
6. Chilton, M.-D., Drummond, M., Merlo, D., Sciaky, D., Montoya, A., Gordon, M. and Nester, E. 1977. Stable incorporation of plasmid DNA into higher plant cells: the molecular basis of crown gall Iumorigenesis. Cell 11:263-271.
7. Chilton, M.-D., Saiki, R., Yadav, N., Gordon, M. and Quelier, F. 1980. T-DNA from Agrobacterium Ti plasmid is in the nuclear DNA fraction of crown gall tumor cells. Proc. Natl. Acad. Sci. USA 77:4060-4064.
8. Lemmers, M., De Beukeleer, M., Holsters, M., Zambryski, P., Depicker, A., Hcrrialslcens, J. P., Van Montagu, M. and Schell, J. 1980. Internal organization, boundaries and integration of Ti-plasmid DNA in nopaline crown gall tumors. J. Mol. Biol. 144:353-376.
9. Merlo, D. J., Nutter, R. C, Montoya, A. L., Garfinkel, D. J., Drummond, M. H., Chilton, M.-D., Gordon, M. P. and Nester, E. W. 1980. The boundaries and copy numbers of Ti plasmid T-DNA vary in crown gall tumors. Mol. Gen. Genet. 177:637-613.
10. Thomashow, M., Nutter, R, Postle, K., Chilton, M.-D., Blattner, F., Powell, A., Gordon, M. and Nester, E. 1980. Recombination between higher plant DNA and the Ti plasmid of Agrobacterium tumefaciens. Proc. Natl. Acad. Sci. USA 77:6448-6452.
11. Willmitzer, L., De Beukeleer, M., Lemmers, M., Van Montagu, M. and Schell, J. 1980. DNA from Ti plasmid present in nucleus and absent from plastids of crown gall plant cells. Nature 287:359-361.
12. Yadav, N. S., Postle, K., Saiki, R. K., Thomashow, M. and Chilton, M. and Schell, J. 1980. T-DNA of a crown gall teratoma is covalently joined to host plant DNA. Nature 287:458-461.
13. Yang, F., Montoya, A., Merlo, D., Drummond, M., Chilton, M.-D., Nester, E. and Gordon, M. 1980. Foreign DNA sequences in crown gall teratomas and their fate during the loss of the tumorous traits. Mol. Gen. Genet. 177:707-714.
14. Zambryski, P., Holsters, M., Kruger, K., Schell, J., Van Montagu, M. and Goodman, H. 1980. Tumor DNA structure in plant cells transformed by Agrobacterium tumefaciens. Science 209:1385-1391.
15. Drummond, M. H., Gordon, M. P., Nester, E. W. and Chilton, M.-D. 1977. Foreign DNA of bacterial plasmid origin is transcribed in crown gall tumors. Nature 269:535-536.
16. Gurley, W. B., Kemp, J. D., Albert, M. J., Sulton, D. W. and Callis, J. 1979. Transcription of Ti plasmid-derived sequences in three octopine-type tumor lines. Proc. Natl. Acad. Sci. USA 76:2828-2832.
17. Gelvin, S. B., Gordon, M. P., Nester, E. W. and Aronson, A. I. 1981. Transcription of the Agrobacterium. Ti plasmid in the bacterium and in crown gall tumors. Plasmid 6:17-29.
18. Bevan, M. W. and Chilton, M.-D. 1982. T-DNA of the Agrobacterium Ti and Ri plasmids. Ann. Rev. Genet. 16:357-384.
19. Garfinkel, D. and Nester, E. 1980. Agrobacterium tumefaciens mutants affected in crown gall tumorigenesis and octopine catabolism. J. Bacteriol. 144:732-743.
20. Engler, G., Depicker, A., Maenhaut, R., Villarroel-Mandiola, R., Van Montagu, M. and Schell, J. 1981. Physical mapping of DNA base sequence homologies between an octopine and a nopaline Ti-plasmid of Agrobacterium tumefaciens. J. Mol. Biol. 152:183-208.
21. Garfinkel, D.J., Simpson, R. B., Ream, L. W., White, F. F., Gordon, M. P. and Nester, E. W. 1981. Genetic analysis of crown gall: fine structure map of the T-DNA by site-directed mutagenesis. Cell 27:143-153.
22. Leemans, J., Shaw, C, Deblaere, R., DeCreve, H., Hernalsteens, J. P., Maes, M., Van Montagu, M. and Schell, J. 1981. Site-specific mutagenesis of Agrobacterium Ti plasmids and transfer of genes to plant cells. J. Mol. Appl. Genet. 1:149-164.
23. Ooms, G., Hooykaas, P., Moolenaar, G. and Schilperoort, R. 1981. Crown gall plant tumors of abnormal morphology, induced by Agrobacterium tumefaciens carrying mutated octopine Ti plasmids; analysis of T-DNA functions. Gene 14:33-50.
24. Schroder, J., Schröder, G-, Huisman, H., Schilperoort, R. A. and Schell, J. 1981. The mRNA for lysopine dehydrogenase in plant tumor cells is complementary to a Ti plasmid fragment. FEBS Lett. 129:166-168.
25. Leemans, J., Deblaere, R., Willmitzer, L., DcGreve, H., Hernalsteens, J. P., Van Montagu, M. and Schell, J. 1982. Genetic identification of functions of TL-DNA transcripts in octopine crown galls. EMBO J. 1:174-152.
26. Murai, N. and Kemp, J. D. 1982. Octopine synthase mRNA isolated from sunflower crown gall callus is homologous to the Ti plasmid of Agrobacterium tumefaciens. Proc. Natl. Acad. Sci. USA 79:86-90.
27. Willmitzer, L., Simons, G. and Schell, J. 1982. The TL-DNA in octopine crown-gall tumors codes for seven well-defined polyadenylated transcripts. EMBO J. 1:139-146.
28. Bevan, M., Barnes, W. and Chilton, M.-D. 1983. Structure and transcription of the nopaline synthase gene region of T-DNA. Nuc. Acids Res. 11:369-385.
29. Hernalsteens, J. P., Van Vliet, F., De Beuckeleer, M., Depicker, A., Engler, G, Lemmers, M., Holsters, M., Van Montagu, M. and Schell, J. 1980. The Agrobacterium tumefaciens Ti plasmid as a host vector system for introducing foreign DNA in plant cells. Nature 287:654-656.
30. Thomashow, M. F., Panagopoulos, C. G., Gordon, M. P. and Nester, W. 1980. Host range of Agrobacterium tumefaciens is determined by the Ti plasmid. Nature 283:794-796.
31. Thomashow, M. F., Knauf, V.C. and Nester, E.W. 1981. Relationship between the limited and wide host range octopine-type Ti plasmids of Agrobacterium tumefaciens. J. Bacteriol. 146:484-493.
32. Panagopoulos, C. G. and Psallidas, P. G. 1973. Characteristics of Greek isolates of Agrobacterium tumefaciens. J. Appl. Bacteriol. 36:233— 240.
33. DeCleene, M. and DeLey, J. 1976. The host range of crown-gall. Botan. Rev. 42:389-466.
34. Loper, J. and Rado, C. 1979. Host range conferred by the virulence-specifying plasmid of Agrobacterium tumefaciens. J. Bacter iol. 139:591-596.
35. Kao, J.C., Perry, K. L. and Kado, C. I. 1982. Indoleacetic acid complementation and its relation to host range specifying genes on the Ti plasmid of Agrobacterium tumefaciens. Mol. Gen. Genet. 188:425-432.
36. Matzke, A. and Chilton, M.-D. 1981. Site specific insertion of genes into T-DNA on the Agrobacterium tumor-inducing plasmid: An approach to genetic engineering of higher plant cells. J. Mol. Appl. Genet. 1:39-49.
37. Bevan, M. W., Flavell, R. B. and Chilton, M.-D. 1983. A chimeric antibiotic resistance gene as a selectable marker for plant cell transfermation. Nature 304:184-187.
38. Fraley, R. T., Rogers, S. G., Horsch, R. B., Sanders, P. R., Flick, J. S., Adams, S. P., Bittner, M. L., Brand, L. A., Fink, C. L., Fry, J. S., Gallupi, G. R., Goldberg, S. B., Hoffmann, N. L. and Woo, S. G. 1983. Expression of bacterial genes in plant cells. Proc. Natl. Acad. Sci. USA 80:4803-4807.
39. Herrera-Estrella, L., DeBlock, M., Messens, E., Hernalsteens, J.-P., Van Montagu, M. and Schell, J. 1983. Chimeric genes as dominant selectable markers in plants. EMBO J. 2:987-995.
40. Helmer, G., Casadaban, M., Bevan, M, Kayes, L. and Chilton, M.-D. 1984. A new chimeric gene as a marker for plant transformation: The expression of Escherichia coli B-galactosidase in sunflower and tobacco cells. Bio/Technology, 2:520-527.
41. Murai, N., Sutton, D., Murray, M., Slightom, J., Merlo, D., Reichert, N., Sengupta-Gopalan, C, Stock, C, Barker, R., Kemp, J. and Hall, T. 1983. Phaseolin gene from bean is expressed after transfer to sunflower via tumor-inducing plasmid vectors. Science 222:476-481.
42. Horsch, R. B., Fraley, R. T., Rogers, S. G., Sanders, P. R., Lloyd, A. and Hoffman, N. 1984. Inheritance of functional foreign genes in plants. Science 223:496-498.
43. Guyon, P., Chilton, M.-D., Petit, A. and Tempé, J. 1980. Agropine in “null-type” crown gall tumors: Evidence for generality of the opine concept. Proc. Natl. Acad. Sci. USA 77:2693-2697.
44. Chang, C.-C, Chen, C.-M., Adams, B. R. and Trost, B. M. 1983. Leucinopine, a characteristic compound of some crown-gall tumors. Proc. Natl. Acad. Sci. USA 80:3573-3576.
45. Dahl, G. A., Guyon, P., Petit, A. and Tempé, J. 1983. Silver nitrate-positive opines in crown gall tumors. Plant Science Letters 32:193-203.
46. Ellis, J. G. and Murphy, P. J. 1981. Four new opines from crown gall tumors—their detection and properties. Mol. Gen. Genet. 181:36-43.
47. Chilton, M.-D., Drummond, M., Merlo, D. and Sciaky D. 1978. Highly conserved DNA of Ti plasmids overlaps T-DNA maintained in plant tumors. Nature 275:147-149.
48. Byrne, M. C, Koplow, J., David, C, Tempé, J. and Chilton, M.-D. 1983. Structure of T-DNA in roots transformed by Agrobacterium rhizogenes. J. Mol. Appl. Genet. 2:201-209.
49. Firmin, J. L. and Fenwick, G. R. 1978. Agropine—A major new plasmid-determined metabolite in crown gall tumors. Nature 276:842-844.
50. Petit, A., David, C, Dahl, G. A., Ellis, J. G., Guyon, P., Casse-Delbart, F. and Tempé, J. 1983. Further extension of the opine concept: Plasmids in Agrobacterium rhizogenes cooperate for opine degradation. Mol. Gen. Genet. 190:204-214.
51. White, F.F., Ghidossi, G., Gordon, M. P. and Nester, E.W. 1982. Tumor induction by Agrobacterium rhizogenes involves the transfer of plasmid DNA to the plant genome. Proc. Natl. Acad. Sci. USA 79:3193-3197.
52. Klee, H. J., Gordon, M. and Nester, E. 1982. Complementation analysis of Agrobacterium tumefaciens Ti plasmid mutations affecting oncogenicity. J. Bacteriol. 150:327-331.
53. Knauf, V. C. and Nester, E. W. 1982. Wide host range cloning vectors: A cosmid clone bank of an Agrobacterium Ti plasmid. Plasmid 8:45-54.
54. Pomponi, M., Spanò, L., Sabbadini, M. G and Costantino, P. 1983. Restriction endonuclease mapping of the root-inducing plasmid of Agrobacterium rhizogenes 1855. Plasmid 10:119-129.
55. Thomashow, M., Nutter, R., Montoya, A., Gordon, M. and Nester, E. 1980. Integration and organization of the Ti plasmid sequences in crown gall tumors. Cell 19:729-739.
56. Depicker, A., De Wilde, M., De Vos, G., De Vos, R., Van Montagu, M. and Schell, J. 1980. Molecular cloning of overlapping segments of the nopaline Ti-plasmid pTiC58 as a means to restriction endonuclease mapping. Plasmid 3:193-211.
57. Sciaky, D., Montoya, A. L. and Chilton, M.-D. 1978. Fingerprints of Agrobacterium Ti plasmids. Plasmid 1:238-253.
58. Sciaky, D. 1977. Plasmids of Agrobacterium tumefaciens and their role in crown gall tumorigenesis. Ph.D. thesis. Washington State University.
59. Murashige, T. and Skoog, F. 1962. A revised method for rapid growth and bioassays with tobacco tissue cultures. Physiol. Plant. 15:473-497.
60. Birnboim, H. C. and Doly, J. 1979. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nuc. Acids Res. 6:1513-1523.
61. Maniatis, J., Fritsch, E. J. and Sambrook, J. 1982. Molecular cloning, A laboratory manual. Cold Spring Harbor Laboratory, New York.
62. Blair, D. G., Sherratt, D. J., Clewell, D. B. and Helinski, D. R. 1972. Isolation of supercoiled colicinogenic factor EI DNA sensitive to ribonuclease and alkali. Proc. Natl. Acad. Sci. USA 69:2518-2522.
63. Currier, T. C. and Nester, E. W. 1976. Isolation of covalently closed circular DNA of high molecular weight from bacteria. Anal. Biochem. 76:431-441.
64. Chilton, M.-D., Tepfer, D. A., Petit, A., David, C, Casse-Delbart, F. and Tempé, J. 1982. Agrobacterium rhizogenes inserts T-DNA into the genomes of the host plant root cells. Nature 295:432-434.
65. Southern, E. M. 1975. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98:503-518.
66. Wahl, G. M., Stern, M. and Stark, G. R. 1979. Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxymethyl paper and rapid hybridization using dextran sulfate. Proc. Natl. Acad. Sci. USA 76:3683-3687.
67. Denhardt, D. T. 1966. A membrane-filter technique for the detection of complementary DNA. Biochem. Biophys. Res. Comm. 23:641-646.
68. Thayer, R. E. 1979. An improved method for detecting foreign DNA in plasmids of Escherichia coli. Anal. Biochem. 98:60-63.
69. Vogelstein, B. and Gillespie, D. 1979. Preparative and analytical purification of DNA from agarose. Proc. Natl. Acad. Sci. USA 76:615-619.
70. Cohen, S., Chang, A. and Hsu, L. 1972. Nonchromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA. Proc. Natl. Acad. Sci. USA 69:2110-2114.
71. Hohn, B. and Collins, J. 1980. A small cosmid for efficient cloning of large DNA fragments. Gene 11:291-298.
72. Ish-Horowicz, D. and Burke, J. F. 1981. Rapid and efficient cosmid cloning. Nuc. Acids Res. 9:2989-2998.
73. Murray, N. E., Brammer, W. J. and Murray, K. 1977. Lamboid phages that simplify the recovery of in vitro recombinants. Mol. Gen. Genet. 150:53-61.
74. Boyer, H. W. and Roulland-Dussoix, D. 1969. A complementation analysis of the restriction and modification of DNA in Escherichia coli. J. Mol. Biol. 41:459-472.
75. Soberon, X., Covarrubias, L. and Bolivar, F. 1980. Construction and characterization of new cloning vehicles. IV. Deletion derivatives of pBR322 and pBR325. Gene 9:287-305.