Seafloor bioalteration of sulfide minerals: Results from in situ incubation studies

Geochimica et Cosmochimica Acta

Volumn 67, Issue 15, 2003, Pages 2843-2856

  Edwards, Katrina J ^a   McCollom, Thomas M ^b   Konishi, Hiromi ^c   Buseck, Peter R ^d  

^a WOODS HOLE OCEANOGRAPHIC INSTITUTION   (United States)

^b UNIVERSITY OF COLORADO   (United States)

^c UNIVERSITY OF NEW MEXICO   (United States)

^d ARIZONA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIUM; BIOTRANSFORMATION; COLONIZATION; GEOMICROBIOLOGY; HYDROTHERMAL VENT; HYDROTHERMAL VENT COMMUNITY; INCUBATION; LOW TEMPERATURE; MINERALIZATION; OXIDATION; SULFIDE;

EID: 0013274443     PISSN: 00167037     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0016-7037(00)00089-9     Document Type: Article

References (53)

1. Alt J.C.Hydrothermal oxide and nontronite deposits on seamounts in the eastern Pacific Mar. Geol. 81 1988 227-239
2. Banfield J. F. and Zhang H. (2001) Nanocrystals in the environment. In Nanocrystals and the Environment (eds. J. F. Banfield and A. Navrotsky), pp. 1-13. Mineralogical Society of America
3. 2 Geochim. Cosmochim. Acta 65 2001 1573-1581
4. Bottcher M.E.Thamdrup B.Vennemann T.W.Oxygen and sulfur isotope fractionation during anaerobic bacterial disproportionation of elemental sulfur Geochim. Cosmochim. Acta 65 2001 1601-1609
5. Butterfield D.A.McDuff R.E.Mottl M.J.Lilley M.D.Lupton J.E.Massoth G.J.Gradients in the composition of hydrothermal fluids from the Endeavour segment vent fields: Phase separation and brine loss J. Geophy. Res. 99 1994 9561-9583
6. Canfield D.E.Fleischer S.Isotope fractionation and sulfur metabolism by pure and enrichment cultures of elemental sulfur-disproportionating bacteria Limnol. Oceanogr. 43 1998 253-264
7. Colmer A.R.Hinkle M.E.The role of microorganisms in acid mine drainage Science 106 1947 253-256
8. de Angelis M.A.Lilley M.D.Olson E.J.Baross J.A.Methane oxidation in deep-sea hydrothermal plumes of the Endeavour Segment of the Juan de Fuca Ridge Deep-Sea Res. I 40 1993 169-1186
9. Delaney J.R.Robigou V.McDuff R.E.Tivey M.K.Geology of a vigorous hydrothermal system on the Endeavour Segment, Juan de Fuca Ridge J. Geophy. Res. 97 1992 19663-19682
10. Eberhard C.Wirsen C.O.Jannasch H.W.Oxidation of polymetal sulfides by chemolithoautotrophic bacteria from deep-sea hydrothermal vents Geomicrobiol. J. 13 1995 145-164
11. Edwards K.J.Schrenk M.O.Hamers R.J.Banfield J.F.Microbial oxidation of pyrite: Experiments using microorganisms from an extreme acidic environment Am. Mineral. 83 1998 1444-11453
12. 2) dissolution: A case study at Iron Mountain, California Geomicrobiol. J. 16 1999 155-179
13. Edwards K.J.Bond P.L.Banfield J.F.Characteristics of attachment and growth of Thiobacillus caldus on sulfide minerals: A chemotactic response to sulfur minerals? Environ. Microbiol. 2 2000 324-332
14. Edwards K.J.Bond P.L.Gihring T.M.Banfield J.F.An Archaeal iron-oxidizing extreme acidophile important in acid mine drainage Science 65 2000 1701-1876
15. Edwards K.J.Hu B.Hamers R.J.Banfield J.F.A new look at microbial leaching patterns on sulfide minerals FEMS Microbiol. Ecol. 1187 2001 197-206
16. Edwards K.J.Rutenburg A.D.Microbial response to surface microtopography: The role of metabolism in localized mineral dissolution Chem. Geol. 180 2001 19-32
17. Emerson D.Moyer C.Isolation and characterization of novel iron-oxidizing bacteria that grow at circumneutral pH Appl. Environ. Microbiol. 63 1997 4784-4792
18. Emerson D., Weiss J. V., and Megonigal J. P. (1999) Iron-oxidizing bacteria are associated with ferric hydroxide precipitates (Fe-plaque) on the roots of wetland plants. Appl. Environ. Microbiol. 65, 2758-2761
19. Emerson D.Moyer C.L.Neutrophilic. Fe-oxidizing bacteria are abundant at the Loihi Seamount hydrothermal vents and play a major role in Fe-oxide deposition Appl. Environ. Microbiol. 68 2002 3085-3093
20. Fortin D.Ferris F.G.Scott S.D.Formation of Fe-silicates and Fe-oxides on bacterial surfaces in samples collected near hydrothermal vents on the Southern Explorer Ridge in the northeast Pacific Ocean Am. Mineral. 83 1998 1399-1408
21. Ghiorse W.C.Biology of iron- and manganese-depositing bacteria Ann. Rev. Microbiol. 38 1984 515-550
22. Guezennec J.Ortega-Morales O.Raguenes G.Geesey G.Bacterial colonization of artificial substrate in the vicinity of deep-sea hydrothermal vents FEMS Microbiol. Ecol. 26 1998 89-99
23. 2+ at neutral pH under anoxic conditions Arch. Microbiol. 166 1996 308-314
24. Hallbeck L.Pedersen K.Culture parameters regulating stalk formation and growth rate of Gallionella ferruginea J. Gen. Microbiol. 136 1990 1675-1680
25. Hallbeck L.Pedersen K.Autotrophic and mixotrophic growth of Gallionella ferruginea J. Gen. Microbiol. 137 1991 2657-2661
26. Hannington M. D. and Jonasson I. R. (1992) Fe and Mn oxides at seafloor hydrothermal vents. In Biomineralization Processes of Iron and Manganese; Modern and Ancient Environments (ed. H. C. Skinner), pp. 351-370. Catena-Verlag
27. Harmsen H.J.Prieur D.Jeanthon C.Distribution of microorganisms in deep-sea hydrothermal vent chimneys investigated by whole-cell hybridization and enrichment culture of thermophilic subpopulations Appl. Environ. Microbiol. 63 1997 2876-2883
28. Herzig P.M.Hannington M.D.Polymetallic massive sulfides at the modern seafloor: A review Ore. Geol. Rev. 10 1995 95-115
29. Jannasch H.W.The chemosynthetic support of life and microbial diversity at deep-sea hydrothermal vents Proc. R. Soc. Lond. B 225 1985 277-297
30. Janney D.E.Cowley J.M.Buseck P.R.Transmission electron microscopy of synthetic 2- and 6-line ferrihydrite Clays Clay Mineral 48 2000 111-119
31. Juniper S.K.Fouquet Y.Filamentous iron-silica deposits from modern and ancient hydrothermal sites Can. Mineral. 26 1988 859-869
32. Karl D. M. (1995) Ecology of free-living hydrothermal vent communities. In The Microbiology of Deep-Sea Hydrothermal Vents (ed. D. M. Karl), pp. 35-124. CRC Press
33. Kucera S.Wolfe R.S.A selective enrichment method for Gallionella ferruginea J. Bacteriol. 74 1957 344-349
34. Labrenz M.Druschel G.K.Thomsen-Ebert T.Gilbert B.Welch S.A.Kemner K.M.Logan G.A.Summons R.E.De Stasio G.Bond P.L.Lai B.Kelly S.D.Banfield J.F.Formation of sphalerite (ZnS) deposits in natural biofilms of sulfate-reducing bacteria Science 290 2000 1744-1747
35. Lathe R.Synthetic oligonucleotide probes deduced from amino acid sequence data. Theoretical and practical considerations J. Mol. Biol. 183 1985 1-12
36. Martello D.V.Vecchio K.S.Diehl J.R.Graham R.A.Tamilia J.P.Pollack S.S.Do dislocations and stacking faults increase the oxidation rate of pyrites? Geochim. Cosmochim. Acta 58 1994 4657-4665
37. McCollom T.M.Methanogenesis as a potential source of chemical energy for primary biomass production by autotrophic organisms in hydrothermal systems on Europa J. Geophys. Res. Planets 104 1999 30729-30742
38. McCollom T.M.Geochemical constraints on primary productivity in submarine hydrothermal vent plumes Deep-Sea Res. I 47 2000 85-101
39. McCollom T.M.Shock E.L.Geochemical constraints on chemolitoautotrophic metabolism by microorganisms in seafloor hydrothermal systems Geochim. Cosmochim. Acta 61 1997 4375-4391
40. McGuire M.M.Edwards K.J.Banfield J.F.Hamers R.J.Kinetics, surface chemistry, and structural evolution of microbially mediated sulfide mineral dissolution Geochim. Cosmochim. Acta 65 2001 57-72
41. Nordstrom D. K. and Alpers C. N. (1999) Geochemistry of acid mine waters. In Reviews in Economic Geology (eds. G. Plumlee and M. Logsdon), pp. 133-160. Society of Economic Geologists
42. Polz M.F.Cavanaugh C.M.Dominance of one bacterial phylotype at a Mid-Atlantic Ridge hydrothermal site Proc. Natl. Acad. Sci. USA 92 1995 7232-7236
43. Polz M.F.Robinson J.J.Cavanaugh C.M.Van Dover C.L.Trophic ecology of massive shrimp aggregations at a Mid-Atlantic Ridge hydrothermal vent site Limnol. Oceanogr. 43 1998 1631-1638
44. 5 Acta Chem. Scand. 25 1971 3329-3336
45. Schrenk M.O.Edwards K.J.Goodman R.M.Hamers R.J.Banfield J.F.Distribution of Thiobacillus ferrooxidans and Leptospirillum ferrooxidans: Implications for generation of acid mine drainage Science 279 1998 1519-1522
46. Schwertmann U. and Cornell R. M. (2000) Iron Oxides in the Laboratory. Wiley
47. Thamdrup B.Finster K.Hansen J.W.Bak F.Bacterial disproportionation of elemental sulfur coupled to chemical reduction of iron and manganese Appl. Environ. Microbiol. 59 1993 101-108
48. Thorseth I.Torsvik T.Torsvik V.Daae F.Pedersen R. Shipboard Scientific Party Diversity of life in ocean floor basalt Earth Planet. Sci. Lett. 194 2001 31-37
49. Van Dover C.L.Fry B.Microorganisms as food resources at deep-sea hydrothermal vents Limnol. Oceanogr. 39 1994 51-57
50. Verati C.de Donato P.Prieur D.Lancelot J.Evidence of bacterial activity from micrometer-scale layer analyses of black-smoker sulfide structures (Pito Seamount Site, Easter microplate) Chem. Geol. 158 1999 257-269
51. Winn C.D.Cowen J.P.Karl D.M.Microbes in deep-sea hydrothermal vent plumes Nature 320 1995 744-746
52. Wirsen C.O.Jannasch H.W.Molyneaux S.J.Chemosynthetic microbial activity at Mid-Atlantic Ridge hydrothermal vent sites J. Geophys. Res. 98 1993 9693-9703
53. Wirsen C.O.Brinkhoff T.Kuever J.Muyzer G.Molynequx S.Jannasch H.W.Comparison of a new Thiomicrospira strain from the Mid-Atlantic Ridge with known hydrothermal vent isolates Appl. Environ. Microbiol. 64 1998 4057-4059