Changes of gene expression in human astrocytic brain tumors

Eksperimentalnaya Onkologiya

Volumn 20, Issue 3-4, 1998, Pages 191-197

  Dmitrenko, V V ^b   Shostak, K O ^a   Garifulin, O M ^a   Zozulya, Yu A ^a   Kavsan, V M ^a  

^a INSTITUTE OF MOLECULAR BIOLOGY AND GENETICS   (Ukraine)

^b STATE INSTITUTION NATIONAL RESEARCH CENTER FOR RADIATION MEDICINE OF THE NATIONAL ACADEMY OF MEDICAL SCIENCES OF UKRAINE   (Ukraine)

Author keywords

Astrocytoma; Gene expression; Tumor markers

Indexed keywords

EID: 0012356666     PISSN: 02043564     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (46)

1. Sidransky D, Mikkelsen T, Schwechheimer K, et al. Clonal expansion of p53 mutant cells is associated with brain tumor progression. Nature 1992; 355: 846-7.
2. Ohgaki H, Schauble B, Zur Hausen A, et al. Genetic alterations associated with the evolution and progression of astrocytic brain tumours. Virchows Archiv 1995; 427: 113-8.
3. Von Deimling A, Louis DN, Von Ammon K, et al. Evidence for a tumor suppressor on chromosome 19q associated with human astrocytomas, oligodendrogliomas and mixed gliomas. Cancer Res 1992; 52: 4277-99.
4. Schmidt EE, Ichimura K, Reifenberger G, Collins VP. CDKN2 (1p16/MTS1) gene deletion or CDK4 amplification occurs in the majority of gliomas. Cancer Res 1994; 54: 6321-4.
5. Walker DG, Duan W, Popovic EA, et al. Homozygous deletions of multiple tumor suppressor gene 1 in the progression of human astrocytomas. Cancer Res 1995; 55: 20-3.
6. Watanabe K, Nagai M, Wakai S, et al. Loss of constitutional heterozygosity in chromosome 10 in human glioblastoma. Acta Neuropathol 1990; 80: 251-4.
7. Pults D, Brockmeyer D, Tullous MV, et al. p53 mutation and loss of heterozygosity on chromosomes 17 and 10 during human astrocytoma progression. Cancer Res 1992; 52: 674-9.
8. Von Deimling A, Louis DN, Von Ammon K, et al. Association of epidermal growth factor receptor gene amplification with loss of chromosome 10 in human glioblastoma multiforme. J Neurosurg 1992; 77: 295-301.
9. Dalrymple SJ, Herath JF, Ritland SR, et al. Use of fluorescence in situ hybridization to detect loss of chromosome 10 in astrocytomas. J Neurosurg 1995; 83: 316-23.
10. Humphrey PA, Gangarosa LM, Wong AJ, et al. Deletion mutant epidermal growth factor receptor in human gliomas: effect of type II mutation on receptor function. Biochem Biophys Res Commun 1991; 178: 1413-20.
11. Ekstrand AJ, Sugawa N, James CD, Collins VP. Amplified and rearranged epidermal growth factor receptor genes in human glioblastomas reveal deletions of sequences encoding portions of the N and/or C terminal tails. Proc Natl Acad Sei USA 1992; 89: 4309-13.
12. Hurtt MR, Moossy J, Donovan Peluso M, Locker J. Amplification of epidermal growth factor receptor gene in gliomas: histopathology and prognosis. J Neuropathol Exp Neurol 1992; 51: 84-90.
13. Willert JR, Daneshvar L, Sheffield VC, Cogen PH. Deletion of chromosome arm 17p DMA sequences in pédiatrie high grade and juvenile pilocytic astrocytomas. Genes Chromosomes Cancer 1995; 12: 165-72.
14. Mohapatra G, Kim DH, Feuerstein BG. Detection of multiple gains and losses of genetic material in ten glioma cell lines by comparative genomic hybridization. Genes Chromosomes Cancer 1995; 12: 86-93.
15. Fujii YJ, Hongo T, Hayashi Y. Chromosome analysis of brain tumors in childhood. Genes Chromosomes Cancer 1994; 11: 205-15.
16. Kirn DH, Mohapatra G, Bollen A, et al. Chromosomal abnormalities in glioblastoma multiforme tumors and glioma cell lines detected by comparative genomic hybridization. Intern J Cancer 1995; 60: 812-9.
17. Sehgal A, Keener C, Boynton AL, et al. Characterization of C4 2 as a tumor suppressor gene in human brain tumors. J Surg Oncol 1997; 64: 102-8.
18. Seghal A, Keener C, Boynton AL, et al. Isolation and characterization of a novel gene from human glioblastoma multiforme tumor tissue. Int J Cancer 1997; 71: 565-72.
19. Uchiyama CM, Zhu J, Carrol RS, et al. Differential display of messenger ribonucleic acid: a useful technique for analyzing differential gene expression in human brain tumors. Neurosurgery 1995; 37: 464-9.
20. Lehrach H, Drmanac R, Hoheisel J, et al. Hybridization fingerprinting in genome mapping and sequencing In: Davies KE, Tilghman SM, eds. Genome Analysis. Vol 1. Genetic and Physical Mapping. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, 1990: 39-81.
21. Chomczynski P, Sacchi N. Single step method of RNA isolation by acid guanidinium thiocyanate phenol chloroform extraction. Anal Biochem 1987; 162: 156-9.
22. Sambrook J, Fritch EF, Maniatis T. Molecular cloning. A laboratory manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, 1989.
23. flMMTpeHKO BB, rapucbyrmH OM, CwnKOflyo AM, KascaH BM. Ananna SKcnpeccnn retHOMa nenoBeio npM noMomw 6n6nuoTeK flHK paannHHbix opranoB. U,MTon reHeTHKa 1995; 29: 64-71.
24. flMnrpeHKO BB, rapncJjyjiMH OM, LU ocra K EA, CwMKOAyo AM, Kaecan BM. XapaKTepuciMxa pa3nnHHbix runoB MPHK, 3Kcnpeccnpyiom,MXCfl B ronoBHOM Moare Menosexa. L(nTon reHeiMKa 1996; 30: 41-7.
25. Sanger FS, Nicklen S, Coulson AR. DNA sequencing with chain terminating inhibitors. Proc Natl Acad Sei USA 1977; 74: 5463-7.
26. Altschul SF, Gish W, Miller W, et al. Basic local alignment search tool. J Mol Biol 1990; 215: 403-10.
27. Baker SG, Reddy EP. Transducers of life and death: TNF receptor superfamily and associated proteins. Oncogene 1996; 12: 1-9.
28. Cao Z, Xiong J, Takeuchi M, et al. TRAF6 is a signal transducer for interleukin 1. Nature 1996; 383: 443-6.
29. Ishida T, Mizushima S, Azuma S, et al. Identification of TRAF6, a novel tumor necrosis factor receptor-associated factor protein that mediates signaling from an amino terminal domain of the CD40 cytoplasmic region. J Biol Chem 1996; 271: 28745-8.
30. Miller J, McLachlan AD, Klug A. Repetitive zinc binding domains in the protein transcription factor IIIA from Xenopus oocytes. EMBO J 1985; 4: 1609-14.
31. Landschulz WH, Johnson PF, McKnight SL. The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins. Science 1988; 240: 1759-64.
32. Yamada SM, Bruner JM, Berger MS, Morrison RS. Expression of fibroblast growth factor receptors (FGFRs) mRNA in human astrocytomas. No To Shinkei 1996; 48: 363-70.
33. Limborska SA, Korneev SA, Maleeva NE, et al. Cloning of Alu containing cDNAs for human fibroblasts and identification of small Alu poly(A) RNAs in a variety of human normal and tumor cells. FEBS Lett 1987; 212: 208-12.
34. Pan J, Elder JT, Duncan CH, Weissman SM. Structural analysis of dispersed repetitive polymerase III transcription units in human DMA. Nucleic Acids Res 1981; 9: 1151-70.
35. Jurka J, Milosavljevic A. Reconstruction and analysis of human Alu genes. J Mol Evol 1991; 32: 105-21.
36. Birnstiel ML, Busslinger M, Strub K. Transcription termination and 3' processing: the end is in site. Cell 1985; 41: 349-59.
37. Wickens M, Stephenson P. Role of the conserved AAUAAA sequence: four AAUAAA point mutants prevent mRNA 3' end formation. Science 1984; 226: 1045-51.
38. Anderson S, Bankier AT, Barrel! BG, et al. Sequence and organization of the human mitochondrial genome. Nature 1981; 290: 457-70.
39. Dubin DT, Montoya J, Timko KD, Attardi G. Sequence analysis and precise mapping of the 3' ends of HeLa cell mitochondrial ribosomal RNAs. J Mol Biol 1982; 157: 1-19.
40. Glaichennhaus N, Leopold P, Cuzin F. Increased levels of mitochondrial gene expression in rat fibroblast cells immortalized or transformed by viral and cellular oncogenes. EMBO J 1986; 5: 1261-5.
41. Corral M, Paris B, Baffet G, et al. Increased level of the mitochondrial ND5 transcript in chemically induced rat hepatomas. Exp Cell Res 1989; 184: 158-66.
42. Yamamoto A, Horai S, Yuasa Y. Increased level of mitochondrial gene expression in polyps of familial polyposis coli patients. Biochem Biophys Res Commun 1989; 159: 1100-6.
43. Torroni A, Stepien G, Hodge JA, Wallace DC. Neoplastic transformation is associated with coordinate induction of nuclear and cytoplasmic oxidative phosphorylation genes. J Biol Chem 1990; 265: 20589-93.
44. Montoya J, Gaines GL, Attardi G. The pattern of transcription of the human mitochondrial rRNA genes reveals two overlapping transcription units. Cell 1983; 34: 151-9.
45. Wilson R, Ainscough R, Anderson K, et al. 2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans. Nature 1994; 368: 32-8.
46. Kozak M. An analysis of 5' noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res 1987; 15: 8125-48.