1The introduction of computers into systematic research in the United States during the 1960s

Studies in History and Philosophy of Science Part C :Studies in History and Philosophy of Biological and Biomedical Sciences

Volumn 32, Issue 2, 2001, Pages 291-314

  Hagen, Joel B ^a  

^a RADFORD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0006827431     PISSN: 13698486     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1369-8486(01)00005-X     Document Type: Article

References (83)

1. Abbott L.A., Bisby F.A., Rogers D.J. Taxonomic Analysis in Biology. 1985;Columbia University Press, New York.
2. Anderson E. Plants, Man and Life. 1952;Little, Brown and Company, Boston.
3. Anderson E. Natural History, Statistics and Applied Mathematics. American Journal of Botany. 43:1956;882-889.
4. Anonymous Computing in the University. Datamation. 8:1962;27-30.
5. Bartcher R.L. FORTRAN IV Program for Estimation of Cladistic Relationships using the IBM 7040. 1966;State Geological Survey, Lawrence, KS.
6. Beatty J. The Proximate/Ultimate Distinction in the Multiple Careers of Ernst Mayr. Biology and Philosophy. 9:1994;333-356.
7. Bonner R.E. On Some Clustering Techniques. IBM Journal of Research and Development. 8(1):1964;22-32.
8. Bossert W. Computer Techniques in Systematics. Systematic Biology. 1969;National Academy of Science, Washington, DC.
9. Camin J.H., Sokal R.R. A Method for Deducing Branching Sequences in Phylogeny. Evolution. 19:1965;311-326.
10. Crick F.H.C. On Protein Synthesis. Symposia of the Society for Experimental Biology. 12:1958;138-163.
11. Daly H.V. Phenetic Classification and Typology. Systematic Zoology. 10:1961;176-179.
12. Dayhoff M.O. Computer Analysis of Protein Evolution. Scientific American. 221(1):1969;87-95.
13. Dayhoff M.O., Eck R.V., Chang M.A., Sochard M.R. Atlas of Protein Sequence and Structure. 1965;National Biomedical Research Foundation, Silver Spring, MD.
14. Dietrich M. Paradox and Persuasion: Negotiating the Place of Molecular Evolution within Evolutionary Biology. Journal of the History of Biology. 31:1998;85-111.
15. Doolittle R.F. Some Reflections on the Early Days of Sequence Searching. Journal of Molecular Medicine. 75(4):1997;239-241.
16. Doolittle R.F., Blomback B. Amino-acid Sequence Investigations of Fibrinopeptides from Various Mammals: Evolutionary Implications. Nature. 202:1964;147-152.
17. Eck R.V., Dayhoff M.O. Atlas of Protein Sequence and Structure. 1966;National Biomedical Research Foundation, Silver Spring, MD.
18. Edwards A.W.F., Cavalli-Sforza L.L. Reconstruction of Evolutionary Trees. Heywood V.H., McNeill J. Phenetic and Phylogenetic Classification. 1964;Systematics Association, London.
19. Ehrlich P.R. Systematics in 1970: Some Unpopular Predictions. Systematic Zoology. 10:1961;157-158.
20. Estabrook G.F. A General Solution in Partial Orders for the Camin-Sokal Model in Phylogeny. Journal of Theoretical Biology. 21:1968;421-438.
21. Farris J.S. Methods for Constructing Wagner Trees. Systematic Zoology. 19:1970;83-92.
22. Farris J.S., Kluge A.G., Eckardt M.J. A Numerical Approach to Phylogenetic Analysis. Systematic Zoology. 19:1970;172-202.
23. Felsenstein J. Numerical Methods for Inferring Evolutionary Trees. Quarterly Review of Biology. 52:1982;379-404.
24. Fitch W.M. Toward Defining the Course of Evolution: Minimum Change for a Specific Tree Topology. Systematic Zoology. 20:1970;406-416.
25. Fitch W.M., Margoliash E. Construction of Phylogenetic Trees. Science. 155:1967;279-284.
26. Fitch W.M., Margoliash E. The Usefulness of Amino Acid and Nucleotide Sequences in Evolutionary Studies. Evolutionary Biology. 4:1970;67-109.
27. Goodfellow M., Jones D., Priest F.G. Computer-assisted Bacterial Systematics. 1985;Academic Press, Orlando.
28. Hagen J.B. Experimentalists and Naturalists in Twentieth-Century Botany: Experimental Taxonomy, 1920-1950. Journal of the History of Biology. 17:1984;249-270.
29. Hagen J.B. Naturalists, Molecular Biologists and the Challenges of Molecular Evolution. Journal of the History of Biology. 32:1999;321-341.
30. Hennig W. Phylogenetic Systematics. 1966;University of Illinois Press, Urbana.
31. Hull D.L. Science as a Process: An Evolutionary Account of the Social and Conceptual Development of Science. 1988;University of Chicago Press, Chicago.
32. Hunt L.T. Margaret O. Dayhoff, 1925-1983. DNA. 2:1983;87-98.
33. Hunt L.T. Margaret Oakley Dayhoff, 1925-1983. Bulletin of Mathematical Biology. 46:1984;467-472.
34. Jahn T.L. Man versus Machine: A Future Problem in Protozoan Taxonomy. Systematic Zoology. 10:1961;179-192.
35. Jahn T.L. The Use of Computers in Systematics. Journal of Parasitology. 48:1962;656-663.
36. Jungck J.R. Margaret Oakley Dayhoff: Harnessing the Computer Revolution. American Biology Teacher. 47:1985;9-10.
37. Kalkman C. Keeping Up With the Joneses. Taxon. 15:1966;177-179.
38. Kluge A.G., Farris J.S. Quantitative Phyletics and The Evolution of Anurans. Systematic Zoology. 18:1969;1-32.
39. Johnson L.A.S. Rainbow's End: The Quest for Optimal Taxonomy. Systematic Zoology. 19:1970;203-239.
40. Lamb S.M., Romney A.K. An Anthropologist's Introduction to the Computer. Hymes D. The Use of Computers in Anthropology. 1965;Mouton, The Hague.
41. Laporte L.F. Simpson on Species. Journal of the History of Biology. 27:1994;141-159.
42. Laporte L.F. The Mind's Eye: George G. Simpson's Use of Visual Language. Earth Sciences History. 14:1995;37-46.
43. Ledley R.S. Digital Electronic Computers in Biomedical Sciences. Science. 130:1959;1225-1234.
44. Ledley R.S. The Use of Computers in Biology and Medicine. 1965;McGraw-Hill, New York.
45. Licklider, J. C. R. (1960) 'The Man-Computer Symbiosis', reprinted in Z. W. Pylyshyn (ed.) (1970), Perspectives on the Computer Revolution (Englewood Cliffs, NJ: Prentice-Hall).
46. MacDonell M.T., Colwell R.R. The Contribution of Numerical Taxonomy to the Systematics of Gram-negative Bacteria. Goodfellow M., Jones D., Priest F.G. Computer-assisted Bacterial Systematics. 1985;Academic Press, Orlando, FL.
47. Mayr E. The New Versus the Classical in Science. Science. 141:1963;765.
48. Mayr E. The New Systematics. Leone C.A. Taxonomic Biochemistry and Serology. 1964;Ronald Press, New York.
49. Mayr E., Ashlock P.D. Principles of Systematic Zoology. 2nd ed:1991;McGraw-Hill, New York.
50. McNeill J. Taximetrics To-day. Heywood V.H., Moore D.M. Current Concepts in Plant Taxonomy. 1984;Academic Press, London.
51. Porter T.M. Trust in Numbers: The Pursuit of Objectivity in Science and Public Life. 1995;Princeton University Press, Princeton.
52. Quicke D.L.J. Principles and Techniques of Contemporary Taxonomy. 1993;Blackie Academic and Professional, New York.
53. Ridley M. Evolution and Classification: The Reformation of Cladism. 1986;Longman, New York.
54. Rogers D.J., Fleming H.S., Estabrook G. Use of Computers in Studies of Taxonomy and Evolution. Evolutionary Biology. 1:1967;169-196.
55. Rogers D.J., Tanimoto T.T. A Computer Program for Classifying Plants. Science. 132:1960;1115-1118.
56. Rohlf F.J., Sokal R.R. The Description of Taxonomic Relationships by Factor Analysis. Systematic Zoology. 11:1962;1-16.
57. Rohlf F.J., Sokal R.R. Taxonomic Structure from Randomly and Systematically Scanned Biological Images. Systematic Zoology. 16:1967;246-260.
58. Rubin J. Optimal Taxonomy Program for the IBM 7090. 1965;International Business Machines, New York.
59. Rubin J. Optimal Classification into Groups: An Approach for Solving the Taxonomy Problem. 1966;International Business Machines, New York.
60. Sanger F. Sequences, Sequences and Sequences. Annual Review of Biochemistry. 57:1988;1-28.
61. Sibley C.G., Ahlquist J.E. Phylogeny and Classification of Birds: A Study in Molecular Evolution. 1990;Yale University Press, New Haven.
62. Simpson G.G. Principles of Animal Taxonomy. 1961;Columbia University Press, New York.
63. Simpson G.G. Primate Taxonomy and Recent Studies of Nonhuman Primates. Annals of the New York Academy of Sciences. 102:1962;497-514.
64. Simpson G.G. Numerical Taxonomy and Biological Classification. Science. 144:1964;712-713.
65. Simpson G.G., Roe A. Quantitative Zoology: Numerical Concepts and Methods in the Study of Recent and Fossil Animals. 1939;McGraw-Hill, New York.
66. Simpson, G. G., Roe A. and Lewontin R. C. (1960) Quantitative Zoology, revised edition (New York: Harcourt Brace).
67. Sneath P.H.A. The Application of Computers to Taxonomy. Journal of General Microbiology. 17:1957;201-226.
68. Sneath P.H.A. Computers in Bacterial Classification. Advancement of Science. 20:1964;572-582.
69. Sneath P.H.A., Sokal R.R. Numerical Taxonomy. 1973;W. H. Freeman, San Francisco.
70. Sokal R.R. Statistical Methods in Systematics. Biological Review. 40:1965;337-391.
71. Sokal R.R. Numerical Taxonomy. Scientific American. 215(12):1966;106-116.
72. Sokal R.R., Rohlf F.J. Biometry: The Principles and Practice of Statistics in Biological Research. 1969;W. H. Freeman, San Francisco.
73. Sokal R.R., Sneath P.H.A. Principles of Numerical Taxonomy. 1963;W. H. Freeman, San Francisco.
74. Sokal R.R., Sneath P.H.A. Efficiency in Taxonomy. Taxon. 15:1966;1-21.
75. Systematics Agenda 2000 (1994) Systematics Agenda 2000: Charting the Biosphere.
76. Tanimoto T.T. An Elementary Mathematical Theory of Classification and Prediction. 1958;International Business Machines, New York.
77. Tanimoto T.T., Loomis R.G. A Taxonomy Program for the IBM 704. 1959;International Business Machines, New York.
78. Vernon K. The Founding of Numerical Taxonomy. British Journal for the History of Science. 21:1988;143-159.
79. Vernon K. Desperately Seeking Status: Evolutionary Systematics and the Taxonomists' Search for Respectability. British Journal for the History of Science. 26:1993;207-227.
80. Williams L.P. What is Science? Agricultural Science Review U.S.D.A. 3(3):1965;18-23.
81. Zuckerkandl E. The Evolution of Hemoglobin. Scientific American. 212(5):1965;110-118.
82. Zuckerkandl E. On the Molecular Evolutionary Clock. Journal of Molecular Evolution. 26:1987;34-46.
83. Zuckerkandl E., Pauling L. Molecules as Documents of Evolutionary History. Journal of Theoretical Biology. 8:1965;357-366.