A methodology for building a data warehouse in a scientific environment

Proceedings - 1st IFCIS International Conference on Cooperative Information Systems, CoopIS 1996

Volumn , Issue , 1996, Pages 90-101

  Aberer, Karl ^a   Hemm, Klemens ^a  

^a FRAUNHOFER IPSI   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

DATA VISUALIZATION; DATA WAREHOUSES; INFORMATION SYSTEMS; INFORMATION USE; MULTI AGENT SYSTEMS; OBJECT ORIENTED PROGRAMMING; OBJECT-ORIENTED DATABASES; QUERY PROCESSING;

COMPUTATIONAL TECHNIQUE; DATA TRANSFORMATION; DRUG DESIGN; HETEROGENEOUS RESOURCES; INTEGRATED ACCESS; LEGACY DATABASE; RATIONAL DRUG DESIGNS; SCIENTIFIC DATA;

METADATA;

EID: 0005949512     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/COOPIS.1996.555001     Document Type: Conference Paper

References (30)

1. Aberer, K.: "The Use of Object-Oriented Data Models for B iomolecular Databases", Proceedings of the Conference on Object-Oriented Computing in the Natural Sciences (OOCNS) '94, Heidelberg, 1995.
2. Aberer, K., Fischer, G.: "Semantic Query Optimization for Methods in Object-Oriented Database Systems", International Conference on Data Engineering (DE) '95, Taipei, Taiwan, p 70-79, 1995.
3. Aberer, K., Hemm, K.: "Semantic Optimization of Biomolecular Queries in Object-oriented Database Systems", Meeting on the Interconnection of Molecular Biology Databases (MIMBD) '95, Cambridge, UK, WWW page http://este.darmstadt.gmd.de:5000/~aberer/MIMBD95.html, 1995.
4. Abiteboul, S., Cluet, S., Milo, T.: "Querying and Updating the File", Proc. of Int. Conf. on VLDB, p. 73-84, 1993.
5. Bairoch, A., Boeckmann, B.: "The SWISS-PROT Protein Sequence Data Bank", Nucleic Acids Res., 19 (Sequences Suppl.), p 2247-2249, 1991.
6. Bernstein, F.C., Koetzle, T.F., Williams, G.J.B., Meyer, E.F. Jr., Brice, M.D., Rodgers, J.R., Kennard, O., Shimanouchi, T., Tasuni, T.: "The Protein Data Bank: A computer based archival file for macromolecular structures", J. Mol. Biol. 112, p 535 - 542, 1977.
7. Buneman, P., Davidson, S.B., Hart, K., Overton, C.:"AData Transformation system for Biological Data Sources", Proceedings of the 21st VLDB Conference, Zurich, Switzerland, 1995.
8. Cabibbo, L.: "On the Power of Stratified Logic Programs with Value Invention for Expressing Database Transformations", ICDT, p 208-221, 1995.
9. Cattell, R. G. G. (Ed.): "Object Databases: The ODMG-93 Standard", Release 1.1, Morgan Kaufmann, San Francisco, 1994.
10. Durbin, R., Thierry-Mieg, J.: "The ACEDB Genome Database", WWW page, http://probe.nalusda.gov:8000/acedocs/dkfz.html.
11. Etzold, T., Argos, P.: "SRS an indexing and retrieval tool for flat file data libraries.", Comput. Appl. Biosci. 9:49-57, 1993.
12. Gardarin, G., Gannouni, S., Beatrice Finance, B., Fankhauser, P., Klas, W., Pastre, D., Legoff, R., Ramfos, A.: IRO-DB: A Distributed System Federating Object and Relational Databases. In: Omran Bukhres and Ahmed K. Elmagarmid, editors, Object Oriented Multidatabase Systems, Prentice Hall, July 1994.
13. Goodman, N.: "An Object-Oriented DBMS War Story: Developing a Genome Mapping Database in C++", in Kim W., ed.: "Modern Database Systems". ACM Press, New York, p 216 - 237, 1995.
14. Hemm, K., Aberer, K., Hendlich, M.: "Constituting a Receptor- Ligand Database from Quality-Enriched Data", Proceedings of the International Conference on Intelligent Systems in Molecular Biology (ISMB) '95, Cambridge, UK, 1995.
15. Inmon, W.H., Kelley, C.: "Rdb/VMS, Developing the Data Warehouse", QED Publishing Group, 1993.
16. Karp, P. (Ed.), Final report on the 1994 Meeting on Interconnection of Molecular Biology Databases, WWW page http://www.ai.sri.com/people/pkarp/mimbd.htmlStanford University, August 9-12, 1994.
17. Klas, W Fankhauser, P., Muth, P., Rakow.T., Neuhold, E.J.: "Database Integration Using the Open Object-Oriented Database System VODAK", in: Object-Oriented Multidatabase Systems, O. Nukhres, A.K. Elmagarmis Eds., Prentice Hall, 1995.
18. Kemp G.J.L., Jiao Z., Gray P.M.D., Fothergill J.E.: "Combining Computation with Database Access in Biomolecular Computing", ADB 94, Vadstena, Sweden, p 317-335, 1994.
19. Kosky, A., Davidson, S., Buneman, P.: "Semantics of Database Transformations", Technial Report MS-CIS-95-25, University of Pennsylvania, 1995.
20. Nishikawa, K., Ishino, S., Takenaka, H., Norioka, N., Hirai, T., Yao, T. and Seto, Y.: "Constructing a protein mutant database", Protein Engng, 7, 733, 1994.
21. Qing Li, Guozhu Dong: A Framework for Object Migration in Object-Oriented Databases. DKE 13(3), p 221-242, 1994.
22. Radeke, E., Scholl, M.:"FederationandStepwiseReduction of Database Systems", ADB 94 Vadstena, Sweden, p 381-399, 1994.
23. Ritter, O., Kocab, P., Senger, M., Wolf, D., Suhai, S.: "Prototype Implementation of the Integrated Genomic Database", Computers and Biomedical Research, 27, p 97-115, 1994.
24. VODAK V 4.0, User Manual, GMD technical report No. 910, 1995.
25. Sheth, A.P., Larson, J.A., "Federated Database Systems for Managing Distributed, Hetereogenous, and Autonomous Databases", ACM Computing Surveys, vol. 22, no. 3, p 183-236, 1990.
26. Vriend, G.: "WHAT IF: A molecular modeling and drug design program.", J. Mol. Graph. 8, 52-56, 1990.
27. Wasch, J., Aberer, K.: "Flexible Design and Efficient Implementation of A Hypermedia Document Database System by Tailoring Semantic Relationships", Proceedings of the IFIP WG2.6 sixth Working Conference on Database Semantics (DS-6) Atlanta, Georgia, USA, 1995.
28. Widom, J., (Ed.), Data Engineering Bulletin 18(2), Special Issue on Materialized Views and Data Warehousing, 1995.
29. Wiederhold, G.: "Mediators in the architecture of futurre information systems", IEEE Computer, 25:38-49, 1992.
30. Zhou G., Hull R., King R., Franchitti J.C.: "Data Integration and Warehousing Using H20", Data Engineering Bulletin 18(2), pp. 29-40, 1995.