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Volumn 15, Issue PART B., 1996, Pages 473-490

Design of High-Annealing-Temperature PCR Primers and Their use in the Development of a Versatile Low-Copy-Number Amplification Protocol

(1)  Mecklenburg, Michael W a  

a NONE

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EID: 0005490755     PISSN: 15692558     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S1569-2558(08)60128-9     Document Type: Article
Times cited : (5)

References (64)
  • 1
    • 0025298979 scopus 로고
    • Simple, sensitive, and specific detection of human immunodeficiency virus type 1 in clinical specimens by polymerase chain reaction with nested primers
    • Albert J., and Fenyo E.M. Simple, sensitive, and specific detection of human immunodeficiency virus type 1 in clinical specimens by polymerase chain reaction with nested primers. J. Clin. Microbiol. 28 (1990) 1560-1564
    • (1990) J. Clin. Microbiol. , vol.28 , pp. 1560-1564
    • Albert, J.1    Fenyo, E.M.2
  • 2
    • 0026703540 scopus 로고
    • Polymerase chain-reaction strategy
    • Arnheim N., and Erlich H. Polymerase chain-reaction strategy. Ann. Rev. Biochem. 61 (1992) 131-156
    • (1992) Ann. Rev. Biochem. , vol.61 , pp. 131-156
    • Arnheim, N.1    Erlich, H.2
  • 3
    • 0026056970 scopus 로고
    • Genetic disease detection and DNA amplification using cloned thermostable ligase
    • Barany F. Genetic disease detection and DNA amplification using cloned thermostable ligase. Proc. Natl. Acad. Sci. USA 88 (1991) 189-193
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 189-193
    • Barany, F.1
  • 5
    • 0025352541 scopus 로고
    • Enzymatic amplification of a Y chromosome repeat in a single blastomere allows identification of the sex preimplantation mouse embryos
    • Bradbury M.W., Isola L.M., and Gondon J.W. Enzymatic amplification of a Y chromosome repeat in a single blastomere allows identification of the sex preimplantation mouse embryos. Proc. Natl. Acad. Sci. USA 87 (1990) 4053-4057
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 4053-4057
    • Bradbury, M.W.1    Isola, L.M.2    Gondon, J.W.3
  • 10
    • 0026603267 scopus 로고
    • Prevention of pre-PCR mis-priming and primer dimerization improves low-copy-number amplifications
    • Chou Q., Russel M., Birch D.E., Raymond J., and Bloch W. Prevention of pre-PCR mis-priming and primer dimerization improves low-copy-number amplifications. Nucleic Acids Res. 20 (1992) 1717-1723
    • (1992) Nucleic Acids Res. , vol.20 , pp. 1717-1723
    • Chou, Q.1    Russel, M.2    Birch, D.E.3    Raymond, J.4    Bloch, W.5
  • 11
    • 0017128634 scopus 로고
    • Replication of human cytomegalovirus DNA: lack of dependence on cell DNA synthesis
    • DeMarchi J.M., and Kaplan S.A. Replication of human cytomegalovirus DNA: lack of dependence on cell DNA synthesis. J. Virol. 18 (1976) 1063-1070
    • (1976) J. Virol. , vol.18 , pp. 1063-1070
    • DeMarchi, J.M.1    Kaplan, S.A.2
  • 12
    • 0019443494 scopus 로고
    • Human cytomegalovirus DNA: restriction enzyme cleavage maps and map locations for immediate-early, early, and late RNAs
    • DeMarchi J.M. Human cytomegalovirus DNA: restriction enzyme cleavage maps and map locations for immediate-early, early, and late RNAs. Virology 114 (1981) 23-38
    • (1981) Virology , vol.114 , pp. 23-38
    • DeMarchi, J.M.1
  • 13
    • 0024214078 scopus 로고
    • Detection of cytomegalovirus in urine from newborns by using polymerse chain reaction DNA amplification
    • Demmler G.J., Buffone G.J., Schimbor C.M., and May R.A. Detection of cytomegalovirus in urine from newborns by using polymerse chain reaction DNA amplification. J. Infect. Dis. 158 (1988) 1177-1184
    • (1988) J. Infect. Dis. , vol.158 , pp. 1177-1184
    • Demmler, G.J.1    Buffone, G.J.2    Schimbor, C.M.3    May, R.A.4
  • 15
    • 0025076262 scopus 로고
    • Probe amplifier system based on chimeric cycling oligonucleotides
    • Duck P., Alvarado-Urbina G., Burdick B., and Collier B. Probe amplifier system based on chimeric cycling oligonucleotides. Biotechniques 9 (1990) 142-149
    • (1990) Biotechniques , vol.9 , pp. 142-149
    • Duck, P.1    Alvarado-Urbina, G.2    Burdick, B.3    Collier, B.4
  • 18
    • 0025837278 scopus 로고
    • Use of self-sustained replication amplification reaction to analyze and detect mutations in zidovudine-resistant human immunodeficiency virus
    • Gingeras T.R., Prodanovich P., Latimer T., Guatelli J.C., Richman D.D., and Barringer K.J. Use of self-sustained replication amplification reaction to analyze and detect mutations in zidovudine-resistant human immunodeficiency virus. J. Infect. Dis. 164 (1991) 1066-1074
    • (1991) J. Infect. Dis. , vol.164 , pp. 1066-1074
    • Gingeras, T.R.1    Prodanovich, P.2    Latimer, T.3    Guatelli, J.C.4    Richman, D.D.5    Barringer, K.J.6
  • 20
    • 0024263668 scopus 로고
    • Specific amplification with PCR of a refractory segment of genomic DNA
    • Haqqi T.M., Sarkar G., David C.S., and Sommer S.S. Specific amplification with PCR of a refractory segment of genomic DNA. Nucleic Acids Res. 24 (1988) 11844
    • (1988) Nucleic Acids Res. , vol.24 , pp. 11844
    • Haqqi, T.M.1    Sarkar, G.2    David, C.S.3    Sommer, S.S.4
  • 22
    • 0026254627 scopus 로고
    • OSP: a computer program for choosing PCR and DNA sequencing primers
    • Hillier L., and Green P. OSP: a computer program for choosing PCR and DNA sequencing primers. PCR Methods Appl. 1 (1992) 124-128
    • (1992) PCR Methods Appl. , vol.1 , pp. 124-128
    • Hillier, L.1    Green, P.2
  • 23
    • 0023013996 scopus 로고
    • Characterization of a major early gene form the human cytomegalovirus long inverted repeat; predicted amino acid sequence of a 30-kDa protein encoded by the 1.2-kb mRNA
    • Hutchinson N.I., and Tocci M.J. Characterization of a major early gene form the human cytomegalovirus long inverted repeat; predicted amino acid sequence of a 30-kDa protein encoded by the 1.2-kb mRNA. Virology 155 (1986) 172-182
    • (1986) Virology , vol.155 , pp. 172-182
    • Hutchinson, N.I.1    Tocci, M.J.2
  • 26
    • 0026701588 scopus 로고
    • Evaluation of the ligase chain reaction (LCR) for the detection of point mutations
    • Kalin I., Shepard S., and Candrian U. Evaluation of the ligase chain reaction (LCR) for the detection of point mutations. Mutat. Res. 283 (1992) 119-123
    • (1992) Mutat. Res. , vol.283 , pp. 119-123
    • Kalin, I.1    Shepard, S.2    Candrian, U.3
  • 27
    • 0001591767 scopus 로고
    • Colorimetric detection of specific DNA segments amplified by polymerase chain reaction
    • Kemp D.J., Smith D.B., Foote S.J., Samaras N., and Peterson M.G. Colorimetric detection of specific DNA segments amplified by polymerase chain reaction. Proc. Natl. Acad. Sci. USA 86 (1989) 2423-2427
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 2423-2427
    • Kemp, D.J.1    Smith, D.B.2    Foote, S.J.3    Samaras, N.4    Peterson, M.G.5
  • 29
    • 84970058638 scopus 로고
    • Optimized hybridization of DNA blotted and fixed to nitrocellulose and nylon membranes
    • Khandjian E.W. Optimized hybridization of DNA blotted and fixed to nitrocellulose and nylon membranes. Bio/Technology 5 (1987) 165-169
    • (1987) Bio/Technology , vol.5 , pp. 165-169
    • Khandjian, E.W.1
  • 30
    • 0023707607 scopus 로고
    • Recombinant fragment assay for gene targeting based on the polyermase chain reaction
    • Kim H.S., and Smithies O. Recombinant fragment assay for gene targeting based on the polyermase chain reaction. Nucleic Acids Res. 16 (1988) 211-216
    • (1988) Nucleic Acids Res. , vol.16 , pp. 211-216
    • Kim, H.S.1    Smithies, O.2
  • 32
    • 0000898830 scopus 로고
    • Transcription-based amplification system and detection of amplified human immunodeficiency virus type 1 with a bead-based sandwich hybridization format
    • Kwok D.Y., Davis G.R., Whitfield K.M., Chappelle H.L., DiMichelle L.J., and Gingeras T.R. Transcription-based amplification system and detection of amplified human immunodeficiency virus type 1 with a bead-based sandwich hybridization format. Proc. Natl. Acad. Sci. USA 86 (1989) 1173-1177
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 1173-1177
    • Kwok, D.Y.1    Davis, G.R.2    Whitfield, K.M.3    Chappelle, H.L.4    DiMichelle, L.J.5    Gingeras, T.R.6
  • 33
    • 0026570056 scopus 로고
    • The polymerase chain reaction and other amplification techniques in immunological research and diagnosis
    • Lew A.M., Brandon R.B., Panaccio M., and Morrow C.J. The polymerase chain reaction and other amplification techniques in immunological research and diagnosis. Immnology 75 (1992) 3-9
    • (1992) Immnology , vol.75 , pp. 3-9
    • Lew, A.M.1    Brandon, R.B.2    Panaccio, M.3    Morrow, C.J.4
  • 34
    • 0025297178 scopus 로고
    • Direct electrophoretic detection of the allelic state of single DNA molecules in human sperm by using the polymerase chain reaction
    • Li H., Cui X., and Arnheim N. Direct electrophoretic detection of the allelic state of single DNA molecules in human sperm by using the polymerase chain reaction. Proc. Natl. Acad. Sci. USA 87 (1990) 4580-4584
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 4580-4584
    • Li, H.1    Cui, X.2    Arnheim, N.3
  • 35
    • 0025361539 scopus 로고
    • A computer program for selection of oligonucleotide primers for polymerase chain reactions
    • Lowe T., Sharefkin J., Yang S.Q., and Dieffenbach C.W. A computer program for selection of oligonucleotide primers for polymerase chain reactions. Nucleic Acids Res. 18 (1990) 1757-1761
    • (1990) Nucleic Acids Res. , vol.18 , pp. 1757-1761
    • Lowe, T.1    Sharefkin, J.2    Yang, S.Q.3    Dieffenbach, C.W.4
  • 36
    • 0026056502 scopus 로고
    • An improved microcomputer program for finding gene- or gene family-specific oligonucleotides suitable as primers for polymerase chain reaction or as probes
    • Lucas K., Busch M., Mossinger S., and Thompson J.A. An improved microcomputer program for finding gene- or gene family-specific oligonucleotides suitable as primers for polymerase chain reaction or as probes. Comput. Appl. Biosci. 7 (1991) 525-529
    • (1991) Comput. Appl. Biosci. , vol.7 , pp. 525-529
    • Lucas, K.1    Busch, M.2    Mossinger, S.3    Thompson, J.A.4
  • 38
    • 77956738092 scopus 로고
    • Manuscript in preparation
    • Mecklenburg, M. (1995b). Manuscript in preparation.
    • (1995)
    • Mecklenburg, M.1
  • 39
    • 0026599578 scopus 로고
    • OLIGOSCAN: a computer program to assist in the design of PCR primers homologous to multiple DNA sequences
    • Montpetit M.L., Cassol S., Salas T., and O'Shaughnessey M.V. OLIGOSCAN: a computer program to assist in the design of PCR primers homologous to multiple DNA sequences. J. Virol. Methods 36 (1992) 119-128
    • (1992) J. Virol. Methods , vol.36 , pp. 119-128
    • Montpetit, M.L.1    Cassol, S.2    Salas, T.3    O'Shaughnessey, M.V.4
  • 40
    • 0023461268 scopus 로고
    • Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction
    • Mullis K.B., and Faloona F. Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Meth. Enzymol. 155 (1987) 335-350
    • (1987) Meth. Enzymol. , vol.155 , pp. 335-350
    • Mullis, K.B.1    Faloona, F.2
  • 41
    • 0026751829 scopus 로고
    • Diagnosis of cytomegalovirus infection: a review
    • Pillay D., and Griffiths D.P. Diagnosis of cytomegalovirus infection: a review. Genitourin Med. 68 (1992) 183-188
    • (1992) Genitourin Med. , vol.68 , pp. 183-188
    • Pillay, D.1    Griffiths, D.P.2
  • 42
    • 0023651359 scopus 로고
    • Anovel form of tissue-specific RNA processing produces apolipoprotein-B48 in intestine
    • Powell L.M., Wallis S.C., Pease R.J., Edwards Y.H., Knott T.J., and Scott J. Anovel form of tissue-specific RNA processing produces apolipoprotein-B48 in intestine. Cell 50 (1987) 831-840
    • (1987) Cell , vol.50 , pp. 831-840
    • Powell, L.M.1    Wallis, S.C.2    Pease, R.J.3    Edwards, Y.H.4    Knott, T.J.5    Scott, J.6
  • 43
    • 0026750781 scopus 로고
    • Fundamentals of polymerase chain reaction-a future in clinical diagnostics
    • Rapley R., Theophilus B.D.M., Bevan L.S., and Walker M.R. Fundamentals of polymerase chain reaction-a future in clinical diagnostics. Med. Lab. Sci. 49 (1992) 119-128
    • (1992) Med. Lab. Sci. , vol.49 , pp. 119-128
    • Rapley, R.1    Theophilus, B.D.M.2    Bevan, L.S.3    Walker, M.R.4
  • 44
    • 0025126876 scopus 로고
    • Thermocylcer temperature variation invalidates PCR results
    • Resendez-Perez D., and Barrera-Saldana H.A. Thermocylcer temperature variation invalidates PCR results. Biotechniques 9 (1990) 286-294
    • (1990) Biotechniques , vol.9 , pp. 286-294
    • Resendez-Perez, D.1    Barrera-Saldana, H.A.2
  • 46
    • 0024385782 scopus 로고
    • Biphasic amplification of very dilute DNA samples via 'Booster' PCR
    • Ruano G., Fenton W., and Kidd K.K. Biphasic amplification of very dilute DNA samples via 'Booster' PCR. Nucleic Acids Res. 17 (1989) 5407-5416
    • (1989) Nucleic Acids Res. , vol.17 , pp. 5407-5416
    • Ruano, G.1    Fenton, W.2    Kidd, K.K.3
  • 47
    • 0024438993 scopus 로고
    • A computer program for choosing optimal oligonucleotides for filter hybridization, sequencing and in vitro amplification of DNA
    • Rychlik W., and Rhoads R.E. A computer program for choosing optimal oligonucleotides for filter hybridization, sequencing and in vitro amplification of DNA. Nucleic Acids Res. 17 (1989) 8543-8551
    • (1989) Nucleic Acids Res. , vol.17 , pp. 8543-8551
    • Rychlik, W.1    Rhoads, R.E.2
  • 48
    • 0022372670 scopus 로고
    • Enzymatic amplification of beta-globin genomic sequences and restriction site analyses for diagnosis of sickle cell anemia
    • Saiki R.K., Scarf S., Faloona K.B., Mullis K.B., Horn G.T., Erlich H.A., and Arnhein N. Enzymatic amplification of beta-globin genomic sequences and restriction site analyses for diagnosis of sickle cell anemia. Science 230 (1985) 1350-1354
    • (1985) Science , vol.230 , pp. 1350-1354
    • Saiki, R.K.1    Scarf, S.2    Faloona, K.B.3    Mullis, K.B.4    Horn, G.T.5    Erlich, H.A.6    Arnhein, N.7
  • 49
    • 0025037431 scopus 로고
    • Optimization of the annealing temperature for DNA amplification in vitro.
    • Rychlik W., Spencer W.J., and Rhoads R.E. Optimization of the annealing temperature for DNA amplification in vitro. Nucleic Acids Res. 18 (1990) 6409-6412
    • (1990) Nucleic Acids Res. , vol.18 , pp. 6409-6412
    • Rychlik, W.1    Spencer, W.J.2    Rhoads, R.E.3
  • 51
    • 0026644604 scopus 로고
    • Immuno-PCR: very sensitive antigen detection by means of specific antibody-DNA conjugates
    • Sano T., Smith C.L., and Cantor C.R. Immuno-PCR: very sensitive antigen detection by means of specific antibody-DNA conjugates. Science 258 (1992) 120-122
    • (1992) Science , vol.258 , pp. 120-122
    • Sano, T.1    Smith, C.L.2    Cantor, C.R.3
  • 52
    • 77956715118 scopus 로고
    • Amplification of nucleic acid sequences by the repair chain reaction
    • Kricka C. (Ed), Springer-Verlag, Berlin
    • Segev D. Amplification of nucleic acid sequences by the repair chain reaction. In: Kricka C. (Ed). Nonradioactive Labeling and Detection of Biomolecules (1993), Springer-Verlag, Berlin
    • (1993) Nonradioactive Labeling and Detection of Biomolecules
    • Segev, D.1
  • 54
    • 0021341076 scopus 로고
    • Structural analyses of the major immediate early gene of human cytomegalovirus
    • Stenberg R.M., Thomsen D.R., and Stinski M.F. Structural analyses of the major immediate early gene of human cytomegalovirus. J. Virol. 49 (1984) 190-199
    • (1984) J. Virol. , vol.49 , pp. 190-199
    • Stenberg, R.M.1    Thomsen, D.R.2    Stinski, M.F.3
  • 55
    • 0018101748 scopus 로고
    • Sequence of protein synthesis in cells infected by human cytomegalovirus: early and late virus-induced polypeptides
    • Stinski M.F. Sequence of protein synthesis in cells infected by human cytomegalovirus: early and late virus-induced polypeptides. J. Virol. 26 (1978) 686-701
    • (1978) J. Virol. , vol.26 , pp. 686-701
    • Stinski, M.F.1
  • 56
    • 0018741734 scopus 로고
    • DNA of human cytomegalovirus: size heterogeneity and defectiveness resulting from serial undiluted passage
    • Stinski M.F., Mocarski E.S., and Thomsen D.R. DNA of human cytomegalovirus: size heterogeneity and defectiveness resulting from serial undiluted passage. J. Virol. 31 (1979) 231-239
    • (1979) J. Virol. , vol.31 , pp. 231-239
    • Stinski, M.F.1    Mocarski, E.S.2    Thomsen, D.R.3
  • 57
  • 58
    • 0026688077 scopus 로고
    • Direct detection of cytomegalovirus in peripheral blood leukocytes-a review of the antigenemia assay and polymerase chain reaction
    • The T.H., van der Ploeg M., vander Berg A.P., Vlieger A.M., van der Giessen M., and van Son W.J. Direct detection of cytomegalovirus in peripheral blood leukocytes-a review of the antigenemia assay and polymerase chain reaction. Transplantation 54 (1992) 193-198
    • (1992) Transplantation , vol.54 , pp. 193-198
    • The, T.H.1    van der Ploeg, M.2    vander Berg, A.P.3    Vlieger, A.M.4    van der Giessen, M.5    van Son, W.J.6
  • 59
    • 0026547223 scopus 로고
    • Isothermal in vitro amplification of DNA by a restriction enzyme/DNA polymerase system
    • Walker G.T., Little M.C., Nadeau J.G., and Shank D.D. Isothermal in vitro amplification of DNA by a restriction enzyme/DNA polymerase system. Proc. Natl. Acad. Sci. USA 89 (1992) 392-396
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 392-396
    • Walker, G.T.1    Little, M.C.2    Nadeau, J.G.3    Shank, D.D.4
  • 60
    • 0024461313 scopus 로고
    • Binding activities of a repertoire of single immunoglobulin variable domains secreted from Escherichia coli [see comments]
    • Ward E.S., Gussow D., Griffiths A.D., Jones P.T., and Winter G. Binding activities of a repertoire of single immunoglobulin variable domains secreted from Escherichia coli [see comments]. Nature 341 (1989) 544-546
    • (1989) Nature , vol.341 , pp. 544-546
    • Ward, E.S.1    Gussow, D.2    Griffiths, A.D.3    Jones, P.T.4    Winter, G.5
  • 61
    • 0025944267 scopus 로고
    • DNA probes: application of the principles of nucleic acid hybridization
    • Wetmur J.G. DNA probes: application of the principles of nucleic acid hybridization. Crit. Rev. Biochem. Mol. Biol. 26 (1991) 227-259
    • (1991) Crit. Rev. Biochem. Mol. Biol. , vol.26 , pp. 227-259
    • Wetmur, J.G.1
  • 62
    • 0024403676 scopus 로고
    • Optimization strategies for the polymerase chain reaction
    • Williams J.F. Optimization strategies for the polymerase chain reaction. BioTechniques 7 (1989) 762-768
    • (1989) BioTechniques , vol.7 , pp. 762-768
    • Williams, J.F.1
  • 63
    • 0025050515 scopus 로고
    • Clonal analyses of gene expression by PCR
    • Witsell A.L., and Schook L.B. Clonal analyses of gene expression by PCR. BioTechniques 9 (1990) 318-322
    • (1990) BioTechniques , vol.9 , pp. 318-322
    • Witsell, A.L.1    Schook, L.B.2
  • 64
    • 0024669956 scopus 로고
    • The ligation amplification reaction (LAR)-amplification of specific sequences using sequential rounds of template-dependent ligation
    • Wu D.Y., and Wallace R.B. The ligation amplification reaction (LAR)-amplification of specific sequences using sequential rounds of template-dependent ligation. Genomics 4 (1989) 560-569
    • (1989) Genomics , vol.4 , pp. 560-569
    • Wu, D.Y.1    Wallace, R.B.2


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