Registration of 3D intraoperative MR images of the brain using a finite element biomechanical model

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 1935, Issue , 2000, Pages 19-28

  Ferrant, Matthieu ^a   Warfield, Simon K ^b   Nabavi, Arya ^b   Jolesz, Ferenc A ^b   Kikinis, Ron ^b  

^a UNIVERSITÉ CATHOLIQUE DE LOUVAIN   (Belgium)

^b HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMECHANICS; DEFORMATION; MAGNETIC RESONANCE; MAGNETIC RESONANCE IMAGING; MEDICAL COMPUTING; MEDICAL IMAGING;

BIO-MECHANICAL MODELS; BOUNDARY SURFACES; CORTICAL SURFACES; FINITE-ELEMENT BIOMECHANICAL MODELS; GOOD CORRELATIONS; LATERAL VENTRICLES; NONRIGID REGISTRATION; VOLUMETRIC DEFORMATION;

FINITE ELEMENT METHOD;

EID: 0003953699     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-40899-4_3     Document Type: Conference Paper

References (28)

1. R.D. Bucholz, D.D. Yeh, J. Trobaugh, L.L. McDurmont, C.D. Sturm, C. Baumann, J.M. Henderson, A. Levy, and P. Kessman. The correction of stereotactic inaccuracy caused by brain shift using an intraoperative ultrasound device. In J. Troccaz, E. Grimson, and R. Mösges, editors, CVRMed-MRCAS ’97, pages 459–466. Springer-Verlag, Berlin, 1997.
2. C.R. Maurer, D.L.G. Hill, A.J. Martin, H. Liu, M. McCue, D. Rueckert, Lloret D., W.A. Hall, R.E. Maxwell, D.J. Hawkes, and C.L. Truwit. Investigation of intraoperative brain deformation using a 1.5 tesla interventional mr system: Preliminary results. IEEE Transactions on Medical Imaging, 17:817–825, 1998.
3. D.D. Paulsen, M.I. Miga, F.E. Kennedy, P.J. Hoopes, A. Hartov, and D.W. Roberts. A Computational Model for Tracking Subsurface Tissue Deformation During Stereotactic Neurosurgery. IEEE Transactions on Biomedical Engineering, 46(2):213–225, February 1999.
4. D.L.G. Hill, C.R. Maurer, A.J. Martin, S. Sabanathan, W.A. Hall, D.J. Hawkes, D. Rueckert, and C.L. Truwit. Assessment of intraoperative brain deformation using interventional mr imaging. In Berlin Springer-Verlag, editor, MICCAI ’99, pages 910–919, 1999.
5. M.I. Miga, K.D. Paulsen, J.M. Lemery, S. D. Eisner, A. Hartov, F.E. Kennedy, and D.W. Roberts. Model-updated image guidance: Initial clinical experiences with gravity-induced brain deformation. IEEE Transactions on Medical Imaging, 18(10):866–874, October 1999.
6. M.I. Miga, K.D. Paulsen, P.J. Hoopes, F.E. Kennedy, A. Hartov, and D.W. Roberts. In vivo quantification of a homogeneous brain deformation model for updating preoperative images during surgery. IEEE Transactions on Medical Imaging, 47(2):266–273, February 2000.
7. O.M. Skrinjar and J.S. Duncan. Real time 3d brain shift compensation. In IPMI ’99, 1999.
8. N. Hata, A. Nabavi, S. Warfield, W.M. Wells, R. Kikinis, and Jolesz F.A. A volumetric optical flow method for measurement of brain deformation from intraoperative magnetic resonance images. In C.Taylor and A.Colchester, editors, MICCAI ’99, Lecture Notes in Computer Science, pages 928–935. Springer-Verlag, 1999.
9. A. Hagemann, Rohr K., H.S. Stiel, U. Spetzger, and Gilsbach J.M. Biomechanical Modeling of the Human Head for Physically Based, Non-Rigid Image Registration. IEEE Transactions on Medical Imaging, 18(10):875–884, October 1999.
10. N. Hata, R. Dohi, S. Warfield, W.M. Wells, R. Kikinis, and Jolesz F.A. Multimodality deformable registration of pre- and intraoperative images for MRI-guided brain surgery. In MICCAI ’98, Lecture Notes in Computer Science, pages 1067–1074. Springer-Verlag, 1998.
11. R. Bajcsy and S. Kovacic. Multi-resolution Elastic Matching. Computer Vision, Graphics, and Image Processing, 46:1–21, 1989.
12. C. Davatzikos. Spatial Transformation and Registration of Brain Images Using Elastically Deformable Models. Computer Vision and Image Understanding, 66(2):207–222, May 1997.
13. G.E. Christensen, S.C. Joshi, and M.I. Miller. Volumetric Transformation of Brain Anatomy. IEEE Transactions on Medical Imaging, 16(6):864–877, December 1997.
14. M. Bro-Nielsen and C. Gramkow. Fast Fluid Registration of Medical Images. In Visualization in Biomedical Computing (VBC ’96), pages 267–276, 1996.
15. O. Skrinjar, D. Spenser, and J. Duncan. Brain Shift Modeling for use in Neurosurgery. In MICCAI ’98, pages 641–649. Springer-Verlag, 1998.
16. S.K. Kyriacou, C. Davatzikos, S.J. Zinreich, and R.N. Bryan. Nonlinear elastic registration of brain images with tumor pathology using a biomechanical model. IEEE Transactions on Medical Imaging, 18(7):580–592, july 1999.
17. Y.C. Fung. Biomechanics: Mechanical Properties of Living Tissues. Springer-Verlag, Berlin, Germany, 1993.
18. E.K. Walsh and A. Schettini. Brain tissue elasticity and CSF elastance. Neurolog. Research, 12:123–127, June 1990.
19. O.C. Zienkewickz and R.L. Taylor. The Finite Element Method. McGraw Hill Book Co., 1987.
20. Will Schroeder, Ken Martin, and Bill Lorensen. The Visualization Toolkit: An Object- Oriented Approach to 3D Graphics. Prentice Hall PTR, New Jersey, second edition, 1998.
21. B. Geiger. Three dimensional modeling of human organs and its application to diagnosis and surgical planning. Technical Report 2105, INRIA, 1993.
22. M. Ferrant, S.K. Warfield, C.R.G. Guttman, F.A. Jolesz, and R. Kikinis. 3D Image Matching Using a Finite Element Based Elastic Deformation Model. In Taylor C. and Colchester A., editors, MICCAI ’99, volume 1679, pages 202–209. Springer-Verlag, 1999.
23. L.D. Cohen and Cohen I. Finite Element Methods for Active Contour Models and Balloons for 2D and 3D Images. IEEE Transactions on Pattern Analysis and Machine Intelligence, 15:1131–1147, 1993.
24. O. Cuisenaire and B. Macq. Fast Euclidean Distance Transformation by Propagation Using Multiple Neighborhoods. Computer Vision and Image Understanding, 76(2):163–172, November 1999.
25. M. Ferrant, O. Cuisenaire, and B. Macq. Multi-Object Segmentation of Brain Structures in 3D MRI Using a Computerized Atlas. In SPIE Medical Imaging ’99, volume 3661-2, pages 986–995, 1999.
26. J.P. Thiran, V. Warscotte, and B. Macq. A Queue-based Region Growing Algorithm for Accurate Segmentation of Multi-Dimensional Images. Signal Processing, 60:1–10, 1997.
27. S. Balay, W.D. Gropp, L. Curfman McInnes, and B.F. Smith. PETSc 2.0 for MPI - Portable, Extensible Toolkit for Scientific Computations. http://www.mcs.anl.gov/petsc, 1998.
28. P. Viola and W.M. Wells. Alignment by Maximization ofMutual Information. International Journal of Computer Vision, 24(2):137–154, 1997.