The application of microsatellite markers to breeding programmes in the sea bass, Dicentrarchus labrax

Aquaculture

Volumn 159, Issue 3-4, 1998, Pages 303-316

  Garcia de Leon, F J ^a,b   Canonne, M ^c   Quillet, E ^d   Bonhomme, F ^a,b   Chatain, B ^c  

^a CNRS   (France)

^b UNIV MONTPELLIER   (France)

^c IFREMER   (France)

^d CEMAGREF   (France)

Author keywords

Breeding programmes; Dicentrarchus labrax; Microsatellite; PCR; Sea bass

Indexed keywords

DICENTRARCHUS LABRAX; SERRANIDAE;

EID: 0002456335     PISSN: 00448486     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0044-8486(97)00188-9     Document Type: Article

References (44)

1. Barnabé, G., 1980. Exposé synoptique des données biologiques sur le loup ou bar, Dicentrarchus labrax (Linné, 1758). Synop. FAO Pêches 126, 70 pp.
2. Barnabé, G., 1990. Rearing bass and gilthead bream. In: G Barnabé (Ed.), Aquaculture. Ellis Horwood, NY, Vol. 2, pp. 647–686.
3. Barnabé, G., Billard, R., 1984. L'aquaculture du bar et des sparidés. INRA Publ., Paris, 542 pp.
4. Bondari, K., Response to bidirectional selection for body weight in channel catfish. Aquaculture 33 (1983), 43–81.
5. Bondari, K., Response of channel catfish to multi-factor and divergent selection of economic traits. Aquaculture 57 (1986), 163–170.
6. Bosworth, B.G., Dunnington, E.A., Libey, G.S., Stallard, L.C., Restriction enzyme/multi-locus probe combinations useful for DNA fingerprinting of the striped bass, white bass and their F1 hybrid. Aquaculture 123 (1994), 205–215.
7. Callen, D.F., Thompson, A.D., Shen, Y., Phillips, H., Richards, R.I., Mulley, J.C., Sutherland, G.R., Incidence and origin of `null' alleles in the (AC)n microsatellite markers. Amer. J. Hum. Genet. 52 (1993), 922–927.
8. Carter, R.E., Mair, G.C., Skibinski, D.O.F., Parkin, D.T., Beardmore, J.A., The application of DNA fingerprinting in the analysis of gynogenesis in tilapia. Aquaculture 95 (1991), 41–52.
9. Castelli, M., Vassart, G., George, C., Philippart, J.C., 1990. DNA fingerprinting in fish: a new generation of genetic markers. In: Amer. Fish. Soc. Symp., 7, 514-520.
10. Chatain, 1994. Estimation et amélioration des performances zootechniques de Dicentrarhus labrax et Sparus auratus. Thése de Doctorat d'Etat, Université d'Aix-Marseille II, 199 pp.
11. Chatain, B., Ounaı̈s-Guschemann, N., Improved rate of initial swimbladder inflation in intensively reared Sparus auratus. Aquaculture 84 (1990), 345–353.
12. Chatain, B., Debas, L., Bourdillon, A., A photographic counting method for fish fingerlings: technical and statistical aspects. Aquaculture 141 (1996), 83–96.
13. Dallas, J.F., Estimation of microsatellite mutation rates in recombinant inbred strains of mouse. Mammalian Genome 3 (1992), 452–456.
14. Ellegren, H., Mutation rates at porcine microsatellite loci. Mammalian Genome 6 (1995), 376–377.
15. Elliot, J.M., 1977. Statistical analysis of samples of benthic invertebrates. Freshwater Biological Assoc. Scientific Publication, 25, 157 pp.
16. Elvingson, P., Johansson, K., Genetic and environmental components of variation in body traits of rainbow trout (Oncorhynchus mykiss) in relation to age. Aquaculture 118 (1993), 191–204.
17. Falconer, D.S., 1989. Introduction to quantitative genetics. 3rd edn., Longman, New York, 284 pp.
18. Ferguson, M.M., Liskauskas, A.P., Danzmann, R.G., Genetic and environmental correlates of variation in body weight of brook trout (Salvelinus fontinalis). Can. J. Fish. Aquat. Sci. 52 (1995), 307–314.
19. Foltz, D.W., Null alleles as a possible cause of heterozygotes deficiencies in the oyster Crassostrea virginica and other bivalves. Evolution 40 (1986), 869–870.
20. Garcia de Leon, F.J., Dallas, J.F., Chatain, B., Canonne, M., Versini, J.J., Bonhomme, F., Development and use of microsatellite markers in sea bass Dicentrarchus labrax (Linnaeus, 1758) (Perciformes: Serranidae). Mol. Marine Biol. Biotechnol. 4:1 (1995), 62–68.
21. Gjedrem, T., Genetic variation in quantitative traits and selective breeding in fish and shellfish. Aquaculture 33 (1983), 51–72.
22. Gjerde, B., Growth and reproduction in fish and shellfish. Aquaculture 57 (1986), 37–55.
23. Gjerde, B., Schaeffer, L.R., Body traits in rainbow trout: II-Estimation of heritabilities and of phenotypic and genetic correlations. Aquaculture 80 (1989), 25–44.
24. Gyapay, G., Morissette, J., Vignal, A., Dib, C., Millasseau, P., Marc, S., Bernardi, G., Lathrop, M., Weissenbach, J., The 1193–1994 Généthon human genetic linkage map. Nature Genet. 7 (1994), 246–249.
25. Harris, A.S., Bieger, S., Doyle, R.W., Wrigth, J.M., DNA fingerprinting of tilapia, Oreochromis niloticus, and its applications to aquaculture genetics. Aquaculture 92 (1991), 157–163.
26. Herbinger, C.M., Doyle, R.W., Pitman, E.R., Paquet, D., Morris, D.B., Cook, D., Wright, J.W., 1994. Analysis of paternal and maternal effects on offspring growth performance in rainbow trout farm, using DNA fingerprinting to inter parentage of the communally reared offspring. In: Fifth International Association for Genetics in Aquaculture. Book of abstracts. International Association for Genetics in Aquaculture at the Marine gene probe Laboratory at Dalhousie university. Halifax, Nova Scotia, Canada.
27. Hospital, F., Chevarlet, C., Mulsant, P., Using markers in gene introgression breeding programs. Genetics 132 (1992), 1199–1210.
28. Kahler, A.L., Allard, R.W., Miller, R.D., Mutation rates for enzyme and morphological loci in barley (Hordeum vulgare L.). Genetics 106 (1984), 729–734.
29. Kara, M.H., Barnabé, G., Giannakorou, A., Influence de la taille des œufs de Dicentrarchus labrax (Moronidae) sur les performances précoces des larves à jeun. Cybium 19:2 (1995), 179–186.
30. Kincaid, H.L., Bridges, W.R., Vonvimbach, B., Three generations of selection for growth rate in fall-spawning rainbow trout. Trans. Am. Fish. Soc. 106 (1977), 621–628.
31. Kirpichnikov, V.S., 1981. Genetic Bases of Fish Selection. Springer-Verlag, Berlin, Heidelberg, 410 pp.
32. Koorey, D.J., Bishop, G.A., McCaughan, G.W., Allele non-amplification: a source of confusion in linkage studies employing microsatellite polymorphisms. Hum. Mol. Genet. 2 (1993), 289–291.
33. Magoulas, A., Batargias C., Sophronidis, K., Kotoulas, G., Zouros, E., 1994. The use of DNA markets for rapid identification of genetical superior parents in masscrosses of gilthead sea bream (Sparus aurata). In: Bordeaux Aquaculture ′94. Méthodes et techniques pour l'amélioration génétique en Aquaculture. Special pub. no. 44, E.A.S. pp. 20–26.
34. McAndrew, B.J., Majumdar, K.C., Tilapia stock identification using electrophoretic markers. Aquaculture 30 (1983), 249–261.
35. Moav, R., Wohlfarth, G.W., Bidirectional mass selection for body shape in common carp. Genet. Sel. Evol. 24 (1992), 43–52.
36. Moav, R., Brody, T., Wohlfarth, G., Hulata, G., Applications of electrophoretic genetic markers to fish breeding: I. advantages and methods. Aquaculture 9 (1976), 217–228.
37. Pemberton, J.M., Slate, J., Bancroft, D.R., Barret, J.A., Non amplifying alleles at microsatellite loci: a caution for parentage and population studies. Mol. Ecology 4 (1995), 249–252.
38. Pickett, G.D., Pawson, M.G., 1994. Sea Bass, Biology, Exploitation and Conservation. Chapman & Hall, London, UK. Fish and fisheries series, 12, 337 pp.
39. Smith, C., Simpson, S.P., The use of genetic polymorphisms in livestock improvement. J. Anim. Breeding Genet. 103 (1986), 205–217.
40. Sokal, R.R., Rohlf, F.J., 1981. Biometry. The principles and practice of statistics in biological research. 2nd edn., W.H. Freeman, New York, 859 pp.
41. Thorpe, J.E., Miles, M.S., Keay, D.S., Developmental rate, fecundity and egg size in Atlantic salmon (Salmo salar L.). Aquaculture 43 (1984), 289–305.
42. Walsh, P.S., Metzger, D.A., Higuchi, R., Chelex-100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. BioTechniques 10:4 (1991), 506–513.
43. Weissenbach, J., Gyapay, G., Dib, C., Vignal, A., Morissetee, J., Millaseau, P., Vaysseix, G., Lathrop, M., A second-generation linkage map of the human genome. Nature 359 (1992), 749–801.
44. Wright, D.K. and Manos, M., 1990. Sample preparation from paraffin-embedded tissues. In: PCR Protocols. A Guide to Methods and Applications Innis, M.A., Gelfano, D.H., Sninsky, J.J., and White, T.J. (eds). New York; Academic Press, pp. 153–158.