Side-chain conformation and dynamics in a solid peptide: CP-MAS NMR study of valine rotamers and methyl-group relaxation in fully 13C-labelled antamanide

Journal of Biomolecular NMR

Volumn 10, Issue 2, 1997, Pages 119-128

  Straus, Suzana K ^a   Bremi, Tobias ^a   Ernst, Richard R ^a  

^a ETH ZURICH   (Switzerland)

Author keywords

Homonuclear decoupling; Methyl group relaxation; Peptide dynamics; Side chain conformation; Solid state NMR; Stereospecific assignment

Indexed keywords

EID: 0001666654     PISSN: 09252738     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1018376516116     Document Type: Article

References (60)

1. Abragam, A. (1961) Principles of Nuclear Magnetism, Oxford University Press, Oxford, U.K.
2. Akasaka, K., Ganapathy, S., McDowell, C.A. and Naito, A. (1983) J. Chem. Phys., 78, 3567-3572.
3. Andrew, E.R., Hinshaw, W.S., Hutchins, M.G., Sjöblom, R.O.I. and Canepa, P.C. (1976) Mol. Phys., 32, 795-806.
4. Balaban, T.S., Boender, G.J., Holzwarth, A.R., Schaffner, K. and De Groot, H.J.M. (1995) Biochemistry, 34, 15259-15266.
5. Baldus, M. and Meier, B.H. (1996) J. Magn. Reson., A121, 65-69.
6. Batchelder, L.S., Niu, C.H. and Torchia, D.A. (1983) J. Am. Chem. Soc., 105, 2228-2231.
7. Bennett, A.E., Rienstra, C.M., Auger, M., Lakshmi, K.V. and Griffin, R.G. (1995) J. Chem. Phys., 103, 6951-6958.
8. Beshah, K., Olejniczak, E.T. and Griffin, R.G. (1987) J. Chem. Phys., 86, 4730-4736.
9. Beshah, K. and Griffin, R.G. (1989) J. Magn. Reson., 84, 268-274.
10. Blackledge, M.J., Brüschweiler, R., Griesinger, C., Schmidt, J.M., Xu, P. and Ernst, R.R. (1993) Biochemistry, 32, 10960-10974.
11. Bremi, T. (1993) Diplomarbeit, ETH Zürich, Zürich, Switzerland.
12. Bremi, T., Ernst, M. and Ernst, R.R. (1994) J. Phys. Chem., 98, 9322-9334.
13. Brüschweiler, R., Blackledge, M. and Ernst, R.R. (1991) J. Biomol. NMR, 1, 3-11.
14. Brüschweiler, R., Roux, B., Blackledge, M.J., Griesinger, C., Karplus, M. and Ernst, R.R. (1992) J. Am. Chem. Soc., 114, 2289-2302.
15. Brüschweiler, R. and Case, D. (1994) Prog. NMR Spectrosc., 26, 27-58.
16. Bürgermeister, W., Wieland, T. and Winkler, R. (1974) Eur. J. Biochem., 44, 311-316.
17. Earl, W.L. and VanderHart, D.L. (1979) J. Magn. Reson., 48, 35-54.
18. Ernst, M. and Ernst, R.R. (1994) J. Magn. Reson., A110, 202-213.
19. Ernst, R.R., Blackledge, M.J., Bremi, T., Brüschweiler, R., Ernst, M., Griesinger, C., Mádi, Z.L., Peng, J.W., Schmidt, J.M. and Xu, P. (1996) In NMR as a Structural Tool for Macromolecules: Current Status and Future Directions (Eds., Rao, N. and Kemple, M.D.), Plenum Press, New York, NY, U.S.A., pp. 15-30.
20. Frey, M.H., Opella, S.J., Rockwell, A.J. and Gierasch, L.M. (1985) J. Am. Chem. Soc., 107, 1946-1951.
21. Griffiths, J.M. and Griffin, R.G. (1993) Anal. Chim. Acta, 283, 1081-1101.
22. Griffiths, J.M., Ashburn, T.T., Auger, M., Costa, P.R., Griffin, R.G. and Lansbury Jr., P.T. (1995) J. Am. Chem. Soc., 117, 3539-3546.
23. Hediger, S., Meier, B.H. and Ernst, R.R. (1995) J. Chem. Phys., 102, 4000-4011.
24. Heller, J., Kolbert, A.C., Larsen, R., Ernst, M., Bekker, T., Baldwin, M., Prusiner, S.B., Pines, A. and Wemmer, D.E. (1996) Protein Sci., 5, 1655-1661.
25. Hirsh, D.J., Hammer, J., Maloy, W.L., Blazyk, J. and Schaefer, J. (1996) Biochemistry, 35, 12733-12741.
26. Karle, I.L., Wieland, T., Schermer, D. and Ottenheym, H.C.J. (1979) Proc. Natl. Acad. Sci. USA, 76, 1532-1536.
27. Kessler, H., Griesinger, C., Lautz, J., Müller, A., van Gunsteren, W.F. and Berendsen, H.C.J. (1988) J. Am. Chem. Soc., 110, 3394-3396.
28. Kessler, H., Bats, J.W., Lautz, J. and Müller, A. (1989a) Liebigs Ann. Chem., 1989, 913-928.
29. Kessler, H., Müller, A. and Pook, K.-H. (1989b) Liebigs Ann. Chem., 1989, 903-912.
30. Kessler, H., Griesinger, C. and Wagner, K. (1987) J. Am. Chem. Soc., 109, 6927-6933.
31. Lansbury Jr., P.T., Costa, P.R., Griffiths, J.M., Simon, E.J., Auger, M., Halverson, K.J., Kociska, D.A., Hendsch, Z.S., Ashburn, T.T., Spencer, R.G.S., Tidor, B. and Griffin, R.G. (1995) Nat. Struct. Biol., 2, 990-998.
32. Lazo, N.D. and Cross, T.A. (1995) J. Magn. Reson., B107, 43-50.
33. Linder, M. (1982) Ph.D. Dissertation (no. 7028), ETH Zürich, Zürich, Switzerland.
34. Mádi, Z.L., Griesinger, C. and Ernst, R.R. (1990) J. Am. Chem. Soc., 112, 2908-2914.
35. Meier, B.H. (1994) Adv. Magn. Reson. Opt. Reson., 18, 1-116.
36. Müller, A. (1986) Ph.D. Dissertation, University of Frankfurt, Frankfurt, Germany.
37. Naito, A., Nishimura, K., Tuzi, S. and Saito, H. (1995) Pept. Chem., 1994, 77-80.
38. Nicholson, L.K., Kay, L.E., Baldisseri, D.M., Arango, J., Young, P.E., Bax, A. and Torchia, D.A. (1992) Biochemistry, 31, 5253-5263.
39. Olivieri, A.C., Frydman, L. and Diaz, L.E. (1987) J. Magn. Reson., 75, 50-62.
40. Opella, S.J., Stewart, P.L. and Valentine, K.G. (1987) Q. Rev. Biophys., 19, 7-49.
41. Palmer III, A.G., Hochstrasser, R.A., Millar, D.P., Rance, M. and Wright, P.E. (1993) J. Am. Chem. Soc., 115, 6333-6345.
42. Press, W. (1981) Single Particle Rotations in Molecular Crystals, Springer, Berlin, Germany.
43. Ramamoorthy, A., Fujiwara, T. and Nagayama, K. (1993) J. Magn. Reson., A104, 366-368.
44. Sarkar, S.K., Torchia, D.A., Kopple, K.D. and VanderHart, D.L. (1984) J. Am. Chem. Soc., 106, 3328-3331.
45. Schleicher, A., Müller, K. and Kothe, G. (1990) J. Chem. Phys., 92, 6432-6440.
46. Schmidt, J.M., Brüschweiler, R., Ernst, R.R., Dunbrack Jr., R.L., Joseph, D. and Karplus, M. (1993) J. Am. Chem. Soc., 115, 8747-8756.
47. Schmidt, J.M. (1997) J. Magn. Reson., 124, 298-309.
48. Schmidt, J.M. (1997) Supramol. Struct. Funct., to appear.
49. Spiess, H.W., Schweitzer, D. and Haeberlen, U. (1973) J. Magn. Reson., 9, 444-460.
50. Spiess, H.W. (1978) NMR Basic Principles Prog., 15, 55-214.
51. Spiess, H.W. (1985) Adv. Polym. Sci., 66, 23-58.
52. Stewart, P.L., Tycko, R. and Opella, S.J. (1988) J. Chem. Soc., Faraday Trans., 84, 3803-3819.
53. Straus, S.K., Bremi, T. and Ernst, R.R. (1996) Chem. Phys. Lett., 262, 709-715.
54. Suter, D. and Ernst, R.R. (1985) Phys. Rev., B32, 5608-5627.
55. Torchia, D.A. and Szabo, A. (1982) J. Magn. Reson., 49, 107-121.
56. Tuzi, S., Shinzawa-Itoh, K., Erata, T., Naito, A., Yoshikawa, S. and Saito, H. (1992) Eur. J. Biochem., 208, 713-720.
57. Tycko, R. (1996) J. Biomol. NMR, 8, 239-251.
58. Wand, A.J., Urbauer, J.L., McEvoy, R.P and Bieber, R.J. (1996) Biochemistry, 35, 6116-6125.
59. Wüthrich, K. (1986) NMR of Proteins and Nucleic Acids, Wiley, New York, NY, U.S.A.
60. Zare, R. (1988) Angular Momentum, Wiley/Interscience, New York, NY, U.S.A.