Phylogeny of the dasyurid marsupial genus Antechinus based on cytochrome-b, 12S-rRNA, and protamine-P1 genes

Journal of Mammalogy

Volumn 79, Issue 4, 1998, Pages 1379-1389

  Armstrong, Lori Ann ^a,c   Krajewski, Carey ^a,b   Westerman, Michael ^b  

^a SOUTHERN ILLINOIS UNIVERSITY   (United States)

^b LA TROBE UNIVERSITY   (Australia)

^c Shawnee Community College   (United States)

Author keywords

12S rRNA; Antechinus; Cytochrome b; Evolution; Phylogeny; Protamine

Indexed keywords

EID: 0001522803     PISSN: 00222372     EISSN: None     Source Type: Journal    
DOI: 10.2307/1383028     Document Type: Article

References (40)

1. ARCHER, M. 1976. The dasyurid dentition and its relationship to that of didelphids, thylacinids, borhyaenids (Marsupicarnivora) and peramelids (Peramelina: Marsupialia). Australian Journal of Zoology, Supplemental Series, 39:1-34.
2. _. 1982. Review of the dasyurid (Marsupialia) fossil record, integration of data bearing on phylogenetic interpretation and suprageneric classification. Pp. 397-443, in Carnivorous marsupials (M. Archer, ed.). Royal Zoological Society of New South Wales, Mossman, Australia, 804 pp.
3. _. 1984. The Australian marsupial radiation. Pp. 633-708, in Vertebrate zoogeography and evolution in Australia (M. Archer and G. Clayton, eds.). Hesperian Press, Carlisle, Western Australia, 1,203 pp.
4. BAVERSTOCK, P. R., M. KRIEG, AND J. BIRRELL. 1990. Evolutionary relationships among Australian marsupials as assessed by albumin immunology. Australian Journal of Zoology, 37:273-287.
5. BAVERSTOCK, P. R., M. ARCHER, M. ADAMS, AND B. J. RICHARDSON. 1982. Genetic relationships among 32 species of Australian dasyurid marsupials. Pp. 641-650, in Carnivorous marsupials (M. Archer, ed.). Royal Zoological Society of New South Wales, Mossman, Australia, 804 pp.
6. DICKMAN, C. R., D. H. KING, M. ADAMS, AND P. R. BAVERSTOCK. 1988. Electrophoretic identification of a new species of Antechinus (Marsupialia: Dasyuridae) in southeastern Australia. Australian Journal of Zoology, 36:455-463.
7. FELSENSTEIN, J. 1985. Confidence limits on phytogenies: an approach using the bootstrap. Evolution, 39: 783-791.
8. _. 1992. PHYLIP (Phytogeny inference package). Version 3.5. Department of Genetics, University of Washington, Seattle, (on disk)
9. FITCH, W. M., AND E. MARGOLIASH. 1967. Construction of phylogenetic trees. Science, 155:279-284.
10. FLANNERY, T. 1995. Mammals of New Guinea. Second ed. Cornell University Press, Ithaca, New York, 464 pp.
11. INNIS, M. A., AND D. H. GELFAND. 1990. Optimization of PCRs. Pp. 3-12, in PCR protocols: a guide to methods and applications (M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White, eds.). Academic Press, San Diego, California, 482 pp.
12. KIRSCH, J. A. W., C. KRAJEWSKI, M. S. SPRINGER, AND M. ARCHER. 1990. DNA/DNA hybridization studies of carnivorous marsupials. II: Relationships among dasyurids (Marsupialia: Dasyuridae). Australian Journal of Zoology, 38:673-696.
13. KRAJEWSKI, C., M. BLACKET, L. BUCKLEY, AND M. WESTERMAN. 1997. A multigene assessment of phylogenetic relationships in the dasyurid marsupial subfamily Sminthopsinae. Molecular Phylogenetics and Evolution, 8:236-248.
14. KRAJEWSKI, C., L. BUCKLEY, P. A. WOOLLEY, AND M. WESTERMAN. 1996. Phylogenetic analysis of cytochrome-b sequences in the dasyurid marsupial sub-family Phascogalinae: systematics and the evolution of reproductive strategies. Journal of Mammalian Evolution, 3:81-91.
15. KRAJEWSKI, C., J. PAINTER, L. BUCKLEY, AND M. WESTERMAN. 1994. Phylogenetic structure of the marsupial family Dasyuridae. Journal of Mammalian Evolution, 2:25-35.
16. KRAJEWSKI, C., J. YOUNG, L. BUCKLEY, P. A. WOOLLEY, AND M. WESTERMAN. 1997. Reconstructing the evolutionary radiation of dasyurine marsupials with cytochrome-b, 12S-rRNA, and protamine gene trees. Journal of Mammalian Evolution 4:217-236.
17. MACLEAY, W. S. 1841. Notice of a new genus of Mammalia discovered by J. Stuart, Esq., in New South Wales. The Annals and Magazine of Natural History, Series 8:242.
18. MADDISON, W. P. 1993. Missing data versus missing characters in phylogenetic analysis. Systematic Biology, 42:576-580.
19. NEI, M. 1987. Molecular evolutionary genetics. Columbia University Press, New York, 512 pp.
20. PATTON, J. L., S. F. DOS REIS, AND M. N. F. DA SILVA. 1996. Relationships among didelphid marsupials based on sequence variation in the mitochondrial cytochrome-b gene. Journal of Mammalian Evolution, 3:3-30.
21. RETIEF, J .D., C. KRAJEWSKI, M. WESTERMAN, AND G. H. DIXON. 1995a. The evolution of protamine P1 genes in dasyurid marsupials. Journal of Molecular Evolution, 41:549-555.
22. RETIEF, J. D., C. KRAJEWSKI, M. WESTERMAN, R. J. WINKFEIN, AND G. H. DIXON. 1995b. Molecular phylogeny and evolution of marsupial protamine P1 genes. Proceedings of the Royal Society of London (B), Biological Sciences, 259:7-14.
23. RIDE, W. D. L. 1964. Antechinus rosamondae, a new species of dasyurid marsupial from the Pilbara District of Western Australia, with remarks on the classification of Antechinus. Western Australian Naturalist, 9:58-65.
24. SAMBROOK, F., E. F. FRITSCH, AND T. MANIATIS. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor Press, Cold Spring Harbor, New York, 1:1-638, 2:1-622, 3:1-380.
25. SAMBROOK, F., E. F. FRITSCH, AND T. MANIATIS. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor Press, Cold Spring Harbor, New York, 1:1-638, 2:1-622, 3:1-380.
26. SAMBROOK, F., E. F. FRITSCH, AND T. MANIATIS. 1989. Molecular cloning: a laboratory manual. Cold Spring Harbor Press, Cold Spring Harbor, New York, 1:1-638, 2:1-622, 3:1-380.
27. SLADE, R. W., C. MORITZ, AND A. HEIDEMAN. 1994. Multiple nuclear-gene phytogenies: application to pinnipeds and comparision with a mitochondrial DNA gene phytogeny. Molecular Biology and Evolution, 11:341-356.
28. SMITH, M. F., W. K. THOMAS, AND J. L. PATTON. 1992. Mitochondrial DNA-like sequence in the nuclear genome of an akodontine rodent. Molecular Biology and Evolution, 9:204-215.
29. SMOLISE, P. E., T. E. DOWLING, J. A. TWOREK, W. R. HOEH, AND W. M. BROWN. 1991. Effects of intraspecific variation on phylogenetic inference: a likelihood analysis of mtDNA restriction site data in cyprinid fishes. Systematic Zoology, 40:393-409.
30. SNEATH, P. H. A., AND R. R. SOKAL. 1973. Numerical taxonomy: the principles and practice of numerical classification. W. H. Freeman and Company, San Francisco, California, 573 pp.
31. SPRINGER, M. S., AND E. DOUZERY. 1996. Secondary structure and patterns of evolution among mammalian mitochondrial 12S-rRNA molecules. Journal of Molecular Evolution, 43:357-373.
32. SPRINGER, M. S., L. J. HOLLAR, AND A. BURKE. 1995. Compensatory substitutions and the evolution of the 12S-rRNA gene in mammals. Molecular Biology and Evolution, 12:1138-1150.
33. STRAHAN, R. (ED.) 1995. The mammals of Australia. The Australian Museum and Reed Books, Chatswood, New South Wales, 756 pp.
34. TATE, G. H. H. 1947. Results of the Archbold Expeditions. No. 56. On the anatomy and classification of the Dasyuridae. Bulletin of the American Museum of Natural History, 88:101-155.
35. TIMMS, M., M. WESTERMAN, AND B. DURING. 1982. Studies of the DNA of some species of Antechinus (Dasyuridae, Marsupialia). Pp. 715-721, in Carnivorous marsupials (M. Archer, ed.). Royal Zoological Society of New South Wales, Mossman, Australia, 804 pp.
36. VAN DYCK, S. M. 1980. The cinnamon antechinus, Antechinus leo (Marsupialia: Dasyuridae), a new species from the vine-forests of the Cape York Penninsula. Australian Mammalogy, 3:5-17.
37. _. 1982. The relationships of Antechinus stuartii and A. flavipes (Dasyuridae, Marsupialia) with special reference to Queensland. Pp. 723-766, in Carnivorous marsupials (M. Archer, ed.). Royal Zoological Society of New South Wales, Mossman, Australia, 804 pp.
38. WAKEFIELD, N. A., AND R. M. WARNEKE. 1967. Some revision in Antechinus (Marsupialia)-2. Victorian Field Naturalist, 84:69-99.
39. WOOLLEY, P. A. 1982. Phallic morphology of the Australian species of Antechinus (Dasyuridae, Marsupialia): a new taxonomic tool? Pp. 767-781, in Carnivorous marsupials (M. Archer, ed.). Royal Zoological Society of New South Wales, Mossman, Australia, 804 pp.
40. _. 1984. Phallic morphology of the New Guinean species of Antechinus. Bulletin of the Australian Mammal Society, 8:182.