메뉴 건너뛰기




Volumn 92, Issue 5, 2000, Pages 964-977

Phylogenetic study of Hypoxylon and related genera based on ribosomal ITS sequences

Author keywords

Biscogniauxia; Camillea; Molecular phylogeny; Nemania; rDNA sequencing; Whalleya; Xylariaceae

Indexed keywords

BISCOGNIAUXIA; CAMILLEA; CREOSPHAERIA; HYPOXYLON; KRETZSCHMARIA; NEMANIA; WHALLEYA; XYLARIACEAE;

EID: 0001328324     PISSN: 00275514     EISSN: None     Source Type: Journal    
DOI: 10.2307/3761591     Document Type: Article
Times cited : (82)

References (39)
  • 1
    • 0033946442 scopus 로고    scopus 로고
    • ITS sequencing supports that Epicoccum nigrum and Phoma epicoccina are the same biological species
    • Arenal F, Platas G, Monte E, Peláez F. 2000. ITS sequencing supports that Epicoccum nigrum and Phoma epicoccina are the same biological species. Mycol Res 104:301-303.
    • (2000) Mycol Res , vol.104 , pp. 301-303
    • Arenal, F.1    Platas, G.2    Monte, E.3    Peláez, F.4
  • 2
    • 0000959380 scopus 로고    scopus 로고
    • Isolation and analysis of endophytic fungal communities from woody plants
    • Redlin SC, Carris LM, eds. St. Paul, Minnesota: APS Press.
    • Bills GF. 1996. Isolation and analysis of endophytic fungal communities from woody plants. In: Redlin SC, Carris LM, eds. Endophytic fungi in grasses and woody plants. Systematics, ecology and evolution. St. Paul, Minnesota: APS Press. p 31-65.
    • (1996) Endophytic Fungi in Grasses and Woody Plants. Systematics, Ecology and Evolution , pp. 31-65
    • Bills, G.F.1
  • 3
    • 0040798123 scopus 로고    scopus 로고
    • Endophytic isolates of Creosphaeria sassafras
    • _, Peláez F. 1996. Endophytic isolates of Creosphaeria sassafras. Mycotaxon 57:471-478.
    • (1996) Mycotaxon , vol.57 , pp. 471-478
    • Peláez, F.1
  • 4
    • 0030057534 scopus 로고    scopus 로고
    • Identification at strain level of Rhizoctonia solani AG4 isolates by direct sequence of asymmetric PCR products of the ITS regions
    • Boysen M, Borja M, del Moral C, Salazar O, Rubio V. 1996. Identification at strain level of Rhizoctonia solani AG4 isolates by direct sequence of asymmetric PCR products of the ITS regions. Curr Genet 29:174-181.
    • (1996) Curr Genet , vol.29 , pp. 174-181
    • Boysen, M.1    Borja, M.2    Del Moral, C.3    Salazar, O.4    Rubio, V.5
  • 5
    • 43949160320 scopus 로고
    • Branch support and tree stability
    • Bremer K. 1994. Branch support and tree stability. Cladistics 10:295-304.
    • (1994) Cladistics , vol.10 , pp. 295-304
    • Bremer, K.1
  • 7
    • 44049118783 scopus 로고
    • Species-specific polymorphisms in transcribed ribosomal DNA of five Pythium species
    • Chen W, Hoy JW, Schneider RW. 1992. Species-specific polymorphisms in transcribed ribosomal DNA of five Pythium species. Exp Mycol 16:22-34.
    • (1992) Exp Mycol , vol.16 , pp. 22-34
    • Chen, W.1    Hoy, J.W.2    Schneider, R.W.3
  • 9
    • 0000461280 scopus 로고
    • Confidence intervals on phytogenies: An approach using the bootstrap
    • Felsenstein J. 1985. Confidence intervals on phytogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 10
    • 0003954036 scopus 로고
    • Seattle: University of Washington
    • _. 1993. PHYLIP manual version 3.5. Seattle: University of Washington.
    • (1993) PHYLIP Manual Version 3.5
  • 11
    • 0027580147 scopus 로고
    • ITS primers with enhanced specificity for basidiomycetes - Application to the identification of mycorrhizae and rusts
    • Gardes M, Bruns TD. 1993. ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Mol Ecol 2:113-118.
    • (1993) Mol Ecol , vol.2 , pp. 113-118
    • Gardes, M.1    Bruns, T.D.2
  • 12
    • 0001524736 scopus 로고
    • Identification of indigenous and introduced symbiotic fungi in ectomycorrhizae by amplification of nuclear and mitochondrial ribosomal DNA
    • _, White TJ, Fortin JA, Bruns TD, Taylor JW. 1991. Identification of indigenous and introduced symbiotic fungi in ectomycorrhizae by amplification of nuclear and mitochondrial ribosomal DNA. Can J Bot 69:180-190.
    • (1991) Can J Bot , vol.69 , pp. 180-190
    • White, T.J.1    Fortin, J.A.2    Bruns, T.D.3    Taylor, J.W.4
  • 13
    • 0242581339 scopus 로고
    • Generation of single-stranded DNA by the polymerase chain reaction and its application to direct sequencing of the HLA-DQA locus
    • Gyllestein UB, Erlich HA. 1988. Generation of single-stranded DNA by the polymerase chain reaction and its application to direct sequencing of the HLA-DQA locus. Proc Natl Acad Sci USA 85:7652-7656.
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 7652-7656
    • Gyllestein, U.B.1    Erlich, H.A.2
  • 15
    • 1842783136 scopus 로고    scopus 로고
    • The genus Biscogniauxia
    • _, San Martín F, Granmo A. 1998. The genus Biscogniauxia. Mycotaxon 66:1-98.
    • (1998) Mycotaxon , vol.66 , pp. 1-98
    • San Martín, F.1    Granmo, A.2
  • 16
    • 0001635590 scopus 로고    scopus 로고
    • Studies on the Amphisphaeriales 1. Amphisphaeriaceae (sensu stricto) and its phylogenetic relationships inferred from 5.8S rDNA and ITS2 sequences
    • Rang JC, Kong RYC, Hyde KD. 1999. Studies on the Amphisphaeriales 1. Amphisphaeriaceae (sensu stricto) and its phylogenetic relationships inferred from 5.8S rDNA and ITS2 sequences. Fung Divers 1:147-157.
    • (1999) Fung Divers , vol.1 , pp. 147-157
    • Rang, J.C.1    Kong, R.Y.C.2    Hyde, K.D.3
  • 18
    • 0002661773 scopus 로고
    • Camillea, Jongiella and light-spored species of Hypoxylon
    • Laessøe T, Rogers JD, Whalley AJS. 1989. Camillea, Jongiella and light-spored species of Hypoxylon. Mycol Res 93: 121-155.
    • (1989) Mycol Res , vol.93 , pp. 121-155
    • Laessøe, T.1    Rogers, J.D.2    Whalley, A.J.S.3
  • 19
    • 0032845186 scopus 로고    scopus 로고
    • Design of a primer for ribosomal DNa internal transcribed spacer with enhanced specificity for ascomycetes
    • Larena I, Salazar O, González V, Julián MC, Rubio V. 1999. Design of a primer for ribosomal DNA internal transcribed spacer with enhanced specificity for ascomycetes. J Biotechnol 75:187-194.
    • (1999) J Biotechnol , vol.75 , pp. 187-194
    • Larena, I.1    Salazar, O.2    González, V.3    Julián, M.C.4    Rubio, V.5
  • 20
    • 0026764455 scopus 로고
    • Phylogeny of five fungus-like protoctistan Phytophthora species, inferred from the internal transcribed spacers of ribosomal DNA
    • Lee SB, Taylor JW. 1992. Phylogeny of five fungus-like protoctistan Phytophthora species, inferred from the internal transcribed spacers of ribosomal DNA. Mol Biol Evol 9:636-653.
    • (1992) Mol Biol Evol , vol.9 , pp. 636-653
    • Lee, S.B.1    Taylor, J.W.2
  • 21
    • 0001207538 scopus 로고
    • Studies in the Xylariaceae, IV. Hypoxylon sections Papillata and Annulata
    • Martin P. 1968. Studies in the Xylariaceae, IV. Hypoxylon sections Papillata and Annulata. J S Afr Bot 34:303-330.
    • (1968) J S Afr Bot , vol.34 , pp. 303-330
    • Martin, P.1
  • 23
    • 0031778848 scopus 로고    scopus 로고
    • Molecular systematics and phylogeography of the Gibberella fujikuroi species complex
    • O'Donnell K, Cigelnik E, Nirenberg HI. 1998. Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90:465-493.
    • (1998) Mycologia , vol.90 , pp. 465-493
    • O'Donnell, K.1    Cigelnik, E.2    Nirenberg, H.I.3
  • 24
    • 0000621563 scopus 로고
    • Xylariaceous fungi as endophytes
    • Petrini LE, Petrini O. 1985. Xylariaceous fungi as endophytes. Sydowia 38:216-234.
    • (1985) Sydowia , vol.38 , pp. 216-234
    • Petrini, L.E.1    Petrini, O.2
  • 25
    • 0000211429 scopus 로고
    • A summary of the Hypoxylon serpens complex
    • _, Rogers JD. 1986. A summary of the Hypoxylon serpens complex. Mycotaxon 26:401-436.
    • (1986) Mycotaxon , vol.26 , pp. 401-436
    • Rogers, J.D.1
  • 26
    • 0002848752 scopus 로고
    • Reassessement of the Hypoxylon serpens -complex I
    • Pouzar Z. 1985a. Reassessement of the Hypoxylon serpens -complex I. Ceská Micol 39:15-25.
    • (1985) Ceská Micol , vol.39 , pp. 15-25
    • Pouzar, Z.1
  • 27
    • 0000806567 scopus 로고
    • Reassessement of the Hypoxylon serpens -complex II
    • _. 1985b. Reassessement of the Hypoxylon serpens -complex II. Ceská Micol 39:129-134.
    • (1985) Ceská Micol , vol.39 , pp. 129-134
  • 28
    • 0002367954 scopus 로고
    • A key and conspectus of Central European species of Biscogniauxia and Obolarina (Pyrenomycetes)
    • _. 1986. A key and conspectus of Central European species of Biscogniauxia and Obolarina (Pyrenomycetes). Ceská Micol 40:1-10.
    • (1986) Ceská Micol , vol.40 , pp. 1-10
  • 29
    • 0000227761 scopus 로고
    • Taxonomie et nomenclature des Diatrypacées à asques octosporés
    • Rappaz F. 1987. Taxonomie et nomenclature des Diatrypacées à asques octosporés. Mycol Helv 2:285-648.
    • (1987) Mycol Helv , vol.2 , pp. 285-648
    • Rappaz, F.1
  • 30
    • 0002881992 scopus 로고
    • The Xylariaceae: Systematic, biological and evolutionary aspects
    • Rogers JD. 1979. The Xylariaceae: systematic, biological and evolutionary aspects. Mycologia 71:1-42.
    • (1979) Mycologia , vol.71 , pp. 1-42
    • Rogers, J.D.1
  • 31
    • 0039398577 scopus 로고    scopus 로고
    • The genus Kretzschmaria
    • _, Ju YM. 1998. The genus Kretzschmaria. Mycotaxon 68:345-393.
    • (1998) Mycotaxon , vol.68 , pp. 345-393
    • Ju, Y.M.1
  • 32
    • 0041107210 scopus 로고    scopus 로고
    • Jumillera and Whalleya, new genera segregated from Biscogniauxia
    • _, San Martín F. 1997. Jumillera and Whalleya, new genera segregated from Biscogniauxia. Mycotaxon 64:39-50.
    • (1997) Mycotaxon , vol.64 , pp. 39-50
    • San Martín, F.1
  • 33
    • 0032985068 scopus 로고    scopus 로고
    • Phylogenetic subgrouping of Rhizoctonia solani AG 2 isolates based on ribosomal ITS sequences
    • Salazar O, Schneider JHM, Julian MC, Keijer J, Rubio V. 1999. Phylogenetic subgrouping of Rhizoctonia solani AG 2 isolates based on ribosomal ITS sequences. Mycologia 91:459-467.
    • (1999) Mycologia , vol.91 , pp. 459-467
    • Salazar, O.1    Schneider, J.H.M.2    Julian, M.C.3    Keijer, J.4    Rubio, V.5
  • 34
    • 0000406063 scopus 로고    scopus 로고
    • Strongest evidence: Maximum apparent phylogenetic signal as a new cladistic optimality criterion
    • Salisbury BA. 1999. Strongest evidence: maximum apparent phylogenetic signal as a new cladistic optimality criterion. Cladistics 15:137-149.
    • (1999) Cladistics , vol.15 , pp. 137-149
    • Salisbury, B.A.1
  • 37
    • 0000128967 scopus 로고    scopus 로고
    • PCR applications in fungal phylogeny
    • Bridge PD, Arora DK, Reddy CA, Elander RP, eds. Wallingford, UK: CAB International.
    • Takamatsu S. 1998. PCR applications in fungal phylogeny. In: Bridge PD, Arora DK, Reddy CA, Elander RP, eds. Applications of PCR in mycology. Wallingford, UK: CAB International. p 125-152.
    • (1998) Applications of PCR in Mycology , pp. 125-152
    • Takamatsu, S.1
  • 38
    • 0027968068 scopus 로고
    • CLUSTALW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl Acids Res 22:4673-4680.
    • (1994) Nucl Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 39
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA for phylogenetics
    • Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. San Diego, California: Academic Press.
    • White TJ, Bruns TD, Lee S, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and applications. San Diego, California: Academic Press. p 315-322.
    • (1990) PCR Protocols: a Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.D.2    Lee, S.3    Taylor, J.W.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.