Genetic differentiation among Danish brown trout populations, as detected by RFLP analysis of PCR amplified mitochondrial DNA segments

Journal of Fish Biology

Volumn 48, Issue 3, 1996, Pages 422-436

  Hansen, M M ^a,b   Loeschcke, V ^a  

^a AARHUS UNIVERSITY   (Denmark)

^b Inland Fisheries Laboratory   (Denmark)

Author keywords

Gene flow; Genetic differentiation; Genetic variability; Mitochondrial DNA RFLP; PCR; Salmo trutta

Indexed keywords

EID: 0000224915     PISSN: 00221112     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1095-8649.1996.tb01437.x     Document Type: Article

References (35)

1. Bernatchez, L., Guyomard, R. & Bonhomme, F. (1992). DNA sequence variation of the mitochondrial control region among geographically and morphologically remote European brown trout Salmo trutta populations. Molecular Ecology 1, 161-173.
2. Birky, C. W. Jr, Fuerst, P. & Maruyama, T. (1989). Organelle gene diversity under migration, mutation and drift: equilibrium expectations, approach to equilibrium, effects of heteroplasmic cells, and comparison to nuclear genes. Genetics 121, 613-627.
3. Birky, C. W. Jr, Maruyama, T. & Fuerst, P. (1983). An approach to population and evolutionary genetic theory for genes in mitochondria and chloroplasts, and some results. Genetics 103, 513-527.
4. Cronin, M. A., Spearman, W. J., Wilmot, R. L., Patton, J. C. & Bickham, J. W. (1993). Mitochondrial DNA variation in chinook (Oncorhynchus tshawytscha) and chum salmon (O. keta) detected by restriction enzyme analysis of polymerase chain reaction (PCR) products. Canadian Journal of Fisheries and Aquatic Science 50, 708-715.
5. Crow, J. F. & Aoki, K. (1984). Group selection for a polygenic trait: estimating the degree of population subdivision. Proceeding of the National Academy of Sciences, U.S.A. 81, 6073-6077.
6. Degnan, S. M. (1993). The perils of single gene trees-mitochondrial versus single-copy nuclear DNA variation in white-eyes (Aves: Zosteropidae). Molecular Ecology 2, 219-225.
7. n microsatellites: a new class of genetic markers for Salmo trutta L. (brown trout). Heredity 71, 488-496.
8. Excoffier, L., Smouse, P. E. & Quattro, J. M. (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131, 479-491.
9. Felsenstein, J. (1993). PHYLIP (Phylogeny Inference Package, Version 3.5c). Seattle, WA: Department of Genetics, SK-50, University of Washington.
10. Ferguson, A. (1989). Genetic differences among brown trout (Salmo trutta) stocks and their importance for the conservation and management of the species. Freshwater Biology 21, 35-46.
11. Ferguson, M. M., Danzmann, R. G. & Hutchings, J. A. (1991). Incongruent estimates of population differentiation among brook charr, Salvelinus fontinalis, from Cape Race, Newfoundland, Canada, based upon allozyme and mitochondrial DNA variation. Journal of Fish Biology 39 (Suppl. A), 79-85.
12. Fitch, W. M. & Margoliash, E. (1967). Construction of phylogenetic trees. Science 155, 279-284.
13. Frankel, O. H. & Soulé, M. E. (1981). Conservation and Evolution. Cambridge: Cambridge University Press.
14. Gyllensten, U. (1985). The genetic structure of fish: differences in the intraspecific distribution of biochemical genetic variation between marine, anadromous, and freshwater species. Journal of Fish Biology 26, 691-699.
15. Gyllensten, U. & Wilson, A. C. (1987). Mitochondrial DNA of salmonids: Inter- and intraspecific variability detected with restriction enzymes. In Population Genetics and Fishery Management (Ryman, N. & Utter, F. M., eds), pp. 301-317. Seattle, WA: University of Washington Press.
16. Hansen, M. M. & Loeschcke, V. (1996). Temporal variation in mitochondrial DNA haplotype frequencies in a brown trout (Salmo trutta L.) population that shows stability in nuclear allele frequencies. Evolution 50, 454-457.
17. Hansen, M. M., Loeschcke, V., Rasmussen, G. & Simonsen, V. (1993). Genetic differentiation among Danish brown trout (Salmo trutta) populations. Hereditas 118, 177-185.
18. Hansen, M. M., Hynes, R. A., Loeschcke, V. & Rasmussen, G. (1995). Assessment of the stocked or wild origin of anadromous brown trout (Salmo trutta L.) in a Danish river system, using mitochondrial DNA RFLP analysis. Molecular Ecology 4, 189-198.
19. Hynes, R. A., Duke, E. J. & Joyce, P. (1989). Mitochondrial DNA as a genetic marker for brown trout, Salmo trutta L., populations. Journal of Fish Biology 35, 687-701.
20. Larsen, K. (1971). Hvor fanges de bornholmske havørreder? In Fiskeriundersogelser i 1970 ved Danmark, Fœroerne og Grønland (Ursin, E. & Horsted, S. A., eds), pp. 10-16. Copenhagen: Andr. Fr. Høst og Søn (in Danish).
21. McCauley, D. E. (1991). Genetic consequences of local population extinction and recolonisation. Trends in Ecology and Evolution 6, 5-8.
22. McElroy, D., Moran, P., Bermingham, E. & Kornfield, I. (1991). REAP. The Restriction Enzyme Analysis Package. Version 4.0. Orono, ME: Department of Zoology, Migratory Fish Research Institute and Center for Marine Studies, University of Maine.
23. Meyer, A. (1994). Molecular phylogenetic studies of fish. In Genetics and Evolution of Aquatic Organisms (Beaumont, A. R., ed.), pp. 219-249. London: Chapman & Hall.
24. Nei, M. (1987). Molecular Evolutionary Genetics. New York: Columbia University Press.
25. Nei, M. & Li, W.-H. (1979). Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Science U.S.A. 76, 5269-5273.
26. Palumbi, S. R., Martin, A. P., Kessing, B. & McMillan, W. O. (1991). Detecting population structure using mitochondrial DNA. In Genetic Ecology of Whales and Dolphins (Hoelzel, A. R., ed.), pp. 271-278. Cambridge: Report of the International Whaling Commission, Special Issue 13.
27. Pamilo, P. & Nei, M. (1988). Relationships between gene trees and species trees. Molecular Biology and Evolution 5, 568-583.
28. Rice, W. R. (1989). Analyzing tables of statistical tests. Evolution 43, 223-225.
29. 2 and the problem of small samples. Molecular Biology and Evolution 6, 539-545.
30. Ryman, N. (1983). Patterns of distribution of biochemical genetic variation in salmonids: differences between species. Aquaculture 33, 1-21.
31. Taggart, J. B. & Ferguson, A. (1990). Hypervariable minisatellite DNA single locus probes for the Atlantic salmon Salmo salar L. Journal of Fish Biology 37, 963-965.
32. Taggart, J. B., Hynes, R. A., Prodöhl, P. A. & Ferguson, A. (1992). A simplified protocol for routine total DNA isolation from salmonid fishes. Journal of Fish Biology 40, 963-965.
33. Takahata, N. & Palumbi, S. R. (1985). Extranuclear differentiation and gene flow in the finite island model. Genetics 109, 441-457.
34. Wright, S. (1931). Evolution in Mendelian populations. Genetics 16, 97-159.
35. Wright, S. (1943). Isolation by distance. Genetics 28, 114-138.